CF832457

Overview
NameCF832457
Unique NameCF832457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:546..1095. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSJ (Catalase isozyme B OS=Oryza sativa subsp. japonica GN=CATB PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.747e-43
Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHRDEEV+YFPSR+D  RHAE+ PIP  V+TG REK  I+KENNF+Q GERYRS+ P RQ+RFL RW+ AL DPR+THE+R IW+SYWSQ D SLGQKLASRLN++P++
Sbjct:  382 NFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFQQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA1_SOLLC (Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 8.672e-43
Identity = 76/111 (68.47%), Postives = 93/111 (83.78%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            N  HRDEEVDY PSR+DP R AE+YPIPS V+ GRR    I KENNFKQ GERYRSW PDRQ+R++N+W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  382 NMTHRDEEVDYLPSRFDPCRPAEQYPIPSCVLNGRRTNCVIPKENNFKQAGERYRSWEPDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA2_WHEAT (Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 1.479e-42
Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NF+HRDEEV+YFPSR DPTRHAE+ P+P  V++G REK  I+KENNFKQ GERYRS+ P RQ+RFL RW+ AL D RVTHE++SIWVSYWSQ D SLGQKLASRL ++P++
Sbjct:  382 NFIHRDEEVNYFPSRVDPTRHAEKDPMPPRVLSGCREKCIIDKENNFKQAGERYRSFDPARQDRFLQRWVDALTDARVTHEIQSIWVSYWSQCDASLGQKLASRLKIKPNM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA1_MAIZE (Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.304e-42
Identity = 77/111 (69.37%), Postives = 92/111 (82.88%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHRDEEV+YFPSR+DP RHAE+ PIP  V+T  REK  I+KENNFKQ GERYRS+ P RQ+RF+ RW+ AL  PRVTHE R+IW+SYWSQ D +LGQKL SRLN++PS+
Sbjct:  382 NFMHRDEEVNYFPSRFDPARHAEKVPIPPRVLTRCREKCIIQKENNFKQAGERYRSFDPARQDRFIQRWVDALTHPRVTHEHRTIWISYWSQCDAALGQKLPSRLNLKPSM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA1_SOLTU (Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.790e-41
Identity = 74/111 (66.67%), Postives = 92/111 (82.88%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            N  HRDEEVDYFPSR+DP R AE+YPIP+ V+ GRR    I KENN KQ GERYRSW  DRQ+R++N+W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  382 NMTHRDEEVDYFPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNSKQAGERYRSWESDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA2_SOLTU (Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 8.117e-41
Identity = 73/111 (65.77%), Postives = 91/111 (81.98%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            N  HRDEEVDY PSR+DP R AE+YPIP+ V+ GRR    I KENNFKQ GERYRSW  DRQ+R++ +W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  382 NMTHRDEEVDYLPSRFDPCRPAEQYPIPACVLNGRRTNCVIPKENNFKQAGERYRSWESDRQDRYITKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLTVKPTM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSJ (Catalase isozyme A OS=Oryza sativa subsp. japonica GN=CATA PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.192e-37
Identity = 71/111 (63.96%), Postives = 88/111 (79.28%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHRDEEVDY+PSR+ P RHA   PI    + GRR+KA I K+N+FKQPGERYRSWAPDRQERF+ R+   L  P+V+ E+R+IWV+Y SQ D SLG K+A+RLNV+PS+
Sbjct:  382 NFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA1_ORYSI (Catalase isozyme A OS=Oryza sativa subsp. indica PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.192e-37
Identity = 71/111 (63.96%), Postives = 88/111 (79.28%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHRDEEVDY+PSR+ P RHA   PI    + GRR+KA I K+N+FKQPGERYRSWAPDRQERF+ R+   L  P+V+ E+R+IWV+Y SQ D SLG K+A+RLNV+PS+
Sbjct:  382 NFMHRDEEVDYYPSRHAPLRHAPPTPITPRPVVGRRQKATIHKQNDFKQPGERYRSWAPDRQERFIRRFAGELAHPKVSPELRAIWVNYLSQCDESLGVKIANRLNVKPSM 492          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA2_HORVU (Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.213e-36
Identity = 68/113 (60.18%), Postives = 91/113 (80.53%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAE--RYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHRDEEVDY+PSR+ P RHAE   +P+P+  + G+REK  I+KEN+F QPGERYRSWAPDRQ+RF+ R+  AL  P+V+HE+R IW+ + S+ D+S G K+A+RLNV+PS+
Sbjct:  382 NFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFVRRFSDALAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 494          
BLAST of CF832457 vs. ExPASy Swiss-Prot
Match: CATA_SECCE (Catalase OS=Secale cereale PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 7.358e-34
Identity = 66/113 (58.41%), Postives = 89/113 (78.76%), Query Frame = -2
Query:  216 NFMHRDEEVDYFPSRYDPTRHAE--RYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 548
            NFMHRDEEVDY+PSR+ P RHAE   +P+P+  + G+REK  I+KEN+F QPGERYRSWAPDRQ+RF+    + L  P+V+HE+R IW+ + S+ D+S G K+A+RLNV+PS+
Sbjct:  381 NFMHRDEEVDYYPSRHAPLRHAEPASFPVPTRPVVGKREKTRIKKENDFVQPGERYRSWAPDRQDRFV-ALRRRLAHPKVSHELRVIWIDFLSKCDKSCGMKVANRLNVKPSM 492          
The following BLAST results are available for this feature:
BLAST of CF832457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA2_ORYSJ1.747e-4370.27Catalase isozyme B OS=Oryza sativa subsp. japonica... [more]
CATA1_SOLLC8.672e-4368.47Catalase isozyme 1 OS=Solanum lycopersicum GN=CAT1... [more]
CATA2_WHEAT1.479e-4270.27Catalase OS=Triticum aestivum GN=CATA PE=2 SV=1[more]
CATA1_MAIZE4.304e-4269.37Catalase isozyme 1 OS=Zea mays GN=CAT1 PE=2 SV=1[more]
CATA1_SOLTU2.790e-4166.67Catalase isozyme 1 OS=Solanum tuberosum GN=CAT1 PE... [more]
CATA2_SOLTU8.117e-4165.77Catalase isozyme 2 OS=Solanum tuberosum GN=CAT2 PE... [more]
CATA1_ORYSJ3.192e-3763.96Catalase isozyme A OS=Oryza sativa subsp. japonica... [more]
CATA1_ORYSI3.192e-3763.96Catalase isozyme A OS=Oryza sativa subsp. indica P... [more]
CATA2_HORVU1.213e-3660.18Catalase isozyme 2 OS=Hordeum vulgare GN=CAT2 PE=2... [more]
CATA_SECCE7.358e-3458.41Catalase OS=Secale cereale PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832457 ID=CF832457; Name=CF832457; organism=Citrus sinensis; type=EST; length=549bp
TTTTTTTTTTTTTTTTGAACTTCTAAAACAGACTTTTATTAATTGCAACA
ACAGGAAAAGAGTCACATAACATGCAAGTTTATTTTCTATATTACAATAT
ACAACAGCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGTG
TTCACTCCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTT
CAAGTGACACCTTCAAATGCTTGGCCTCACATTGAGACGAGAAGCTAGCT
TCTGACCCAGAGATCTGTCGGCCTGAGACCAGTAAGAGACCCATATGCTG
CGAACCTCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCATCGATT
AAGGAACCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAG
GCTGCTTGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCT
GTAATTACATCAGAAGGAATGGGATATCTCTCAGCATGACGAGTAGGATC
ATACCTCGAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTC
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