CF832458

Overview
NameCF832458
Unique NameCF832458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:545..1095. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA_SOLME (Catalase OS=Solanum melongena PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.602e-44
Identity = 79/111 (71.17%), Postives = 97/111 (87.39%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEEVDY PSR+DP R AE+YPIPS V+TGRREK  I KENNFKQ GERYR+W PDRQ+R++N+W+++L DPRVTHE+RSIW+SY SQAD+S GQK+ASRL V+P++
Sbjct:  382 NFMHRDEEVDYLPSRFDPCRPAEQYPIPSCVLTGRREKCVIPKENNFKQAGERYRTWEPDRQDRYINKWVESLSDPRVTHEIRSIWISYLSQADKSCGQKVASRLLVKPTM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA2_CUCPE (Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.602e-44
Identity = 79/112 (70.54%), Postives = 100/112 (89.29%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKEN-NFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEEV+YFPSRYD  RHAE+YP+P +V++G+RE+  I KEN NFKQ G+RYRSWAPDRQERF+NR+++AL D +VTHEVR+IW+SYW+QADRSLGQK+ASR+N RP++
Sbjct:  381 NFMHRDEEVNYFPSRYDACRHAEKYPMPPNVLSGKRERCVIPKENHNFKQAGDRYRSWAPDRQERFVNRFVEALSDSKVTHEVRNIWISYWTQADRSLGQKIASRMNARPNM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 2.093e-44
Identity = 78/111 (70.27%), Postives = 97/111 (87.39%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEEVDY PSR+DP RHAE+YPIPS V+TGRRE   IEKENNFKQ GERYRSW PDRQ+R++++W++ L DPRVT+E+RSIW+SY SQAD+S GQK+ASRL ++P++
Sbjct:  382 NFMHRDEEVDYLPSRFDPCRHAEQYPIPSRVLTGRREMCVIEKENNFKQAGERYRSWEPDRQDRYVSKWVEHLSDPRVTYEIRSIWISYLSQADKSCGQKVASRLTLKPTM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA1_ARATH (Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV=3)

HSP 1 Score: 178.333 bits (451), Expect = 2.093e-44
Identity = 81/110 (73.64%), Postives = 94/110 (85.45%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPS 332
            NFMH DEEV+YFPSR DP RHAE+YP    V +G REK  I KENNFKQPGERYRSW  DRQERF+ R+++AL +PRVTHE+RSIW+SYWSQAD+SLGQKLA+RLNVRP+
Sbjct:  382 NFMHRDEEVNYFPSRLDPVRHAEKYPTTPIVCSGNREKCFIGKENNFKQPGERYRSWDSDRQERFVKRFVEALSEPRVTHEIRSIWISYWSQADKSLGQKLATRLNVRPN 491          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA3_ARATH (Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV=3)

HSP 1 Score: 176.792 bits (447), Expect = 6.089e-44
Identity = 77/111 (69.37%), Postives = 95/111 (85.59%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEE++Y+PS++DP R AE+ P P++  TG R K  I+KENNFKQ G+RYRSWAPDRQ+RF+ RW++ L +PR+THE+R IW+SYWSQADRSLGQKLASRLNVRPSI
Sbjct:  382 NFMHRDEEINYYPSKFDPVRCAEKVPTPTNSYTGIRTKCVIKKENNFKQAGDRYRSWAPDRQDRFVKRWVEILSEPRLTHEIRGIWISYWSQADRSLGQKLASRLNVRPSI 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA2_NICPL (Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN=CAT2 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 7.953e-44
Identity = 77/111 (69.37%), Postives = 96/111 (86.49%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEEVDY PSR+DP RHAE+YPIPS V+ GRRE   IEKENNFKQ GERYRSW PDRQ+R++++W++ L DPRVT+E+RSIW+SY SQAD+S GQK+ASRL ++P++
Sbjct:  382 NFMHRDEEVDYLPSRFDPCRHAEQYPIPSRVLNGRREMCVIEKENNFKQAGERYRSWEPDRQDRYVSKWVEHLSDPRVTYEIRSIWISYLSQADKSCGQKVASRLTLKPTM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA_PEA (Catalase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.039e-43
Identity = 82/113 (72.57%), Postives = 96/113 (84.96%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKAL--CDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            N +H DEEV+YFPSR+D  RHAER PIP+  ++ RREK  I K+N+FKQ GERYR+WAPDRQERFL RW++AL   DPR+THE+RSIWVSYWSQADRSLGQKLAS LN+RPSI
Sbjct:  382 NAIHRDEEVNYFPSRHDTVRHAERVPIPTTHLSARREKCNIPKQNHFKQAGERYRTWAPDRQERFLRRWVEALSDTDPRITHEIRSIWVSYWSQADRSLGQKLASHLNMRPSI 494          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA1_HORVU (Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.314e-43
Identity = 78/111 (70.27%), Postives = 95/111 (85.59%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NF+H DEEV+YFPSR+DPTRHAE+YP+P  V++G REK  I+KENNFKQ GERYRS+ P RQ+RFL RW+ AL D RVTHE++SIWVSYWSQ D SLGQKLASRL ++P++
Sbjct:  382 NFIHRDEEVNYFPSRFDPTRHAEKYPMPPRVLSGCREKCIIDKENNFKQAGERYRSFDPARQDRFLQRWVDALTDARVTHEIQSIWVSYWSQCDASLGQKLASRLKIKPNM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA2_ORYSI (Catalase isozyme B OS=Oryza sativa subsp. indica GN=CATB PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 3.947e-43
Identity = 78/111 (70.27%), Postives = 93/111 (83.78%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEEV+YFPSR+D  RHAE+ PIP  V+TG REK  I+KENNFKQ GERYRS+ P RQ+RFL RW+ AL DPR+THE+R IW+SYWSQ D SLGQKLASRLN++P++
Sbjct:  382 NFMHRDEEVNYFPSRFDAARHAEKVPIPPRVLTGCREKCVIDKENNFKQAGERYRSFDPARQDRFLQRWVDALSDPRITHELRGIWISYWSQCDASLGQKLASRLNLKPNM 492          
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA2_MAIZE (Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 5.155e-43
Identity = 80/111 (72.07%), Postives = 92/111 (82.88%), Query Frame = 3
Query:    3 NFMHLDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH  EEVDYFPSRYD  R+A RYPIP+  I GRREK  I KENNFKQPGERYR+  P RQERF+ RW+ AL DPR+THE+R+IW+S WSQADRSLGQKLASRL+ +PS+
Sbjct:  381 NFMHRHEEVDYFPSRYDAVRNAPRYPIPTAHIAGRREKTVISKENNFKQPGERYRAMDPARQERFITRWVDALSDPRLTHEIRTIWLSNWSQADRSLGQKLASRLSAKPSM 491          
The following BLAST results are available for this feature:
BLAST of CF832458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA_SOLME1.602e-4471.17Catalase OS=Solanum melongena PE=2 SV=1[more]
CATA2_CUCPE1.602e-4470.54Catalase isozyme 2 OS=Cucurbita pepo GN=CAT2 PE=2 ... [more]
CATA1_TOBAC2.093e-4470.27Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA1_ARATH2.093e-4473.64Catalase-1 OS=Arabidopsis thaliana GN=CAT1 PE=1 SV... [more]
CATA3_ARATH6.089e-4469.37Catalase-3 OS=Arabidopsis thaliana GN=CAT3 PE=1 SV... [more]
CATA2_NICPL7.953e-4469.37Catalase isozyme 2 OS=Nicotiana plumbaginifolia GN... [more]
CATA_PEA1.039e-4372.57Catalase OS=Pisum sativum PE=2 SV=1[more]
CATA1_HORVU2.314e-4370.27Catalase isozyme 1 OS=Hordeum vulgare GN=CAT1 PE=2... [more]
CATA2_ORYSI3.947e-4370.27Catalase isozyme B OS=Oryza sativa subsp. indica G... [more]
CATA2_MAIZE5.155e-4372.07Catalase isozyme 2 OS=Zea mays GN=CAT2 PE=2 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01O07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832458 ID=CF832458; Name=CF832458; organism=Citrus sinensis; type=EST; length=551bp
TGAATTTCATGCACTTGGATGAGGAGGTCGATTACTTTCCTTCGAGGTAT
GATCCTACTCGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTAC
AGGAAGGCGTGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGC
CTGGAGAGAGATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTT
AATCGATGGATTAAGGCTTTATGTGACCCACGTGTCACCCATGAGGTTCG
CAGCATATGGGTCTCTTACTGGTCTCAGGCCGACAGATCTCTGGGTCAGA
AGCTAGCTTCTCGTCTCAATGTGAGGCCAAGCATTTGAAGGTGTCACTTG
AACTGGAACACTGGATGCTTTTGACTTGCCAAGAGTGAGCAAGGAGTGAA
CACCAAGGGTGCAGCTATGTGAAGAATTTCGATCCTATGTTTGCTGTTGT
ATATTGTAATATAGAAAATAAACTTGCATGTTATGTGACTCTTTTCCTGT
TGTTTCAATTAATAAAAGTCTGTTTTATGAAGTTCAAAAAAAAAAAAAAA
A
back to top