CF832465

Overview
NameCF832465
Unique NameCF832465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length835
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB15_ANTMA (Myb-related protein 315 OS=Antirrhinum majus GN=MYB315 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.207e-36
Identity = 69/104 (66.35%), Postives = 79/104 (75.96%), Query Frame = -2
Query:  520 EKMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 831
            EK GLK+GPWT EEDQ L +Y+   G   WR +PK AGL RCGKSCRLRW+NYLRPD+K+G  T  EE+ II LH  LGNRWS IA  +PGRTDNEIKN W+TH
Sbjct:    8 EKFGLKRGPWTEEEDQKLTSYVLKNGIQGWRVIPKLAGLSRCGKSCRLRWMNYLRPDLKKGPLTEMEENQIIELHAHLGNRWSKIALHIPGRTDNEIKNYWNTH 111          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.689e-36
Identity = 63/99 (63.64%), Postives = 82/99 (82.83%), Query Frame = -2
Query:  520 KKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 816
            KKG WT EED+IL++Y++ +G G+W  + K+ GL RCGKSCRLRW+NYL P++ RGNFT +EED II LH++LGNRWS IA R+PGRTDN++KN W+TH
Sbjct:   13 KKGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTH 111          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: TT2_ARATH (Transcription factor TT2 OS=Arabidopsis thaliana GN=TT2 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.335e-35
Identity = 70/122 (57.38%), Postives = 83/122 (68.03%), Query Frame = -2
Query:  454 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHXXXXXXXXXXQEPVINNHSNAN 819
            L +G WT  ED+IL +YI  +G G W  LP QAGL RCGKSCRLRW NYLRP IKRGN + +EE+ II LH +LGNRWS IA RLPGRTDNEIKN W+++          ++P    HS  N
Sbjct:   14 LNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRLPKTQTKQPKRIKHSTNN 135          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.743e-35
Identity = 71/128 (55.47%), Postives = 87/128 (67.97%), Query Frame = -2
Query:  436 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHXXXXXXXXXXQEPVINNHSNANHVTARS 819
            +KKG W+PEED  L+ Y+   G G W  + K AGL RCGKSCRLRWINYLRPD+KRG F+ +EED II  H +LGNRWS IAARLPGRTDNEIKN W++              +INN S++ +  + S
Sbjct:   18 MKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKKMSDTSNLINNSSSSPNTASDS 145          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.883e-35
Identity = 63/99 (63.64%), Postives = 78/99 (78.79%), Query Frame = -2
Query:  523 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 819
            LKKGPWT  ED IL++Y++ +G GNW A+ K  GL RCGKSCRLRW N+LRP++K+G FT EEE  II LH  +GN+W+ +AA LPGRTDNEIKN W+T
Sbjct:   40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNT 138          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.883e-35
Identity = 63/99 (63.64%), Postives = 78/99 (78.79%), Query Frame = -2
Query:  523 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 819
            LKKGPWT  ED IL++Y++ +G GNW A+ K  GL RCGKSCRLRW N+LRP++K+G FT EEE  II LH  +GN+W+ +AA LPGRTDNEIKN W+T
Sbjct:   40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNT 138          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: GL1_ARATH (Trichome differentiation protein GL1 OS=Arabidopsis thaliana GN=GL1 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 6.624e-35
Identity = 62/104 (59.62%), Postives = 80/104 (76.92%), Query Frame = -2
Query:  520 EKMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 831
            E    KKG WT EED IL++Y+  +G G W  + ++ GL RCGKSCRLRW+NYL P++ +GNFT +EED II LH++LGNRWS IA R+PGRTDN++KN W+TH
Sbjct:   10 ENQEYKKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTH 113          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: GL1_ARALY (Trichome differentiation protein GL1 OS=Arabidopsis lyrata GN=GL1 PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 6.624e-35
Identity = 62/104 (59.62%), Postives = 80/104 (76.92%), Query Frame = -2
Query:  520 EKMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 831
            E    KKG WT EED IL++Y+  +G G W  + ++ GL RCGKSCRLRW+NYL P++ +GNFT +EED II LH++LGNRWS IA R+PGRTDN++KN W+TH
Sbjct:   10 ENQEYKKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTH 113          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.517e-34
Identity = 66/105 (62.86%), Postives = 84/105 (80.00%), Query Frame = -2
Query:  523 CEKMGLKKGPWTPEEDQILINYIQLYGHG-NWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 834
            C+K  +KKGPW+PEED  L +YI+  G G NW ALP++ GL RCGKSCRLRW+NYLRP+IK G F+ EEE+ I +L+  +G+RWS IAA+LPGRTDN+IKN W+T
Sbjct:    7 CDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNT 111          
BLAST of CF832465 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.287e-34
Identity = 62/103 (60.19%), Postives = 82/103 (79.61%), Query Frame = -2
Query:  520 KMGLKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHTH 828
            K  +K+G W PEED IL +Y++ +G GNW  + +++GL R GKSCRLRW NYLRP+IKRG+ + +E+D II +H++LGNRWS IA RLPGRTDNE+KN W+TH
Sbjct:    9 KSYVKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTH 111          
The following BLAST results are available for this feature:
BLAST of CF832465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
MYB15_ANTMA1.207e-3666.35Myb-related protein 315 OS=Antirrhinum majus GN=MY... [more]
MYB23_ARATH2.689e-3663.64Transcription factor MYB23 OS=Arabidopsis thaliana... [more]
TT2_ARATH1.335e-3557.38Transcription factor TT2 OS=Arabidopsis thaliana G... [more]
MYB46_ARATH1.743e-3555.47Transcription factor MYB46 OS=Arabidopsis thaliana... [more]
GAM1_ORYSJ3.883e-3563.64Transcription factor GAMYB OS=Oryza sativa subsp. ... [more]
GAM1_ORYSI3.883e-3563.64Transcription factor GAMYB OS=Oryza sativa subsp. ... [more]
GL1_ARATH6.624e-3559.62Trichome differentiation protein GL1 OS=Arabidopsi... [more]
GL1_ARALY6.624e-3559.62Trichome differentiation protein GL1 OS=Arabidopsi... [more]
RAX3_ARATH2.517e-3462.86Transcription factor RAX3 OS=Arabidopsis thaliana ... [more]
MYB82_ARATH3.287e-3460.19Transcription factor MYB82 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O11_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832465 ID=CF832465; Name=CF832465; organism=Citrus sinensis; type=EST; length=835bp
TTTTTTTTTTTTTTTTTCCACTAAGAAAGTGAAAATTAGTTACTTTAATC
ATAAAATTTCTGGTAACATTTCTGAGAAATCTCCAGCTTTGGTGAAAAGA
TTGAACCAAAAGTCGGTGTTATCACACAAAGTAGAACCAGGTCTAAAAGC
ATCGAGTGATGATTGAAATTCAACTATAGACAGTGGGTCGGCGCCTCCAA
CCGCTGAAAAACGATCATTGCTGTCCTCAATACTAATGCCCGAGTTCTCA
GCCGACAACACTTCCGTCCAAAAATTCTCATCTATTTCAACCAAGCTGTC
GTGATTGTTTTCGGACGACGACGGCTCTGTTTTCACGCAAGCGTTATTAG
CCGCGGAGGAGGTGACGGACGACATGTCGCTTGAAGTAGTAGTCGAGTCT
TGCCGATCGGGAGTACTGGCGCCGCTGCAAATCTCGGATCTCGCCGTAAC
ATGATTAGCGTTACTATGATTATTAATCACGGGCTCTTGTTGTTGCTTTT
GCTTGAGACGCTTTTTCAAGTGAGTGTGCCAAACATTTTTAATTTCGTTG
TCCGTTCTTCCCGGAAGTCTTGCTGCGATTGCTGACCATCTATTTCCGAG
CATTTCATGTAGGTTGATGATAGTGTCCTCTTCTTCTCTGGTGAAATTTC
CCCGTTTAATATCCGGCCGCAAGTAATTTATCCACCGGAGCCGGCAACTC
TTTCCACATCTTAATAAACCTGCTTGTTTGGGAAGTGCCCGCCAGTTGCC
ATGGCCATAAAGTTGAATGTAATTGATTAAAATTTGATCTTCTTCAGGAG
TCCATGGACCTTTCTTCAATCCCATCTTCTCGCAG
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