CF832474

Overview
NameCF832474
Unique NameCF832474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_THELT (S-adenosylmethionine synthetase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=metK PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.452e-61
Identity = 125/227 (55.07%), Postives = 156/227 (68.72%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED--------IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKY 745
            LFTSESV EGHPDK+ DQISDA+LDA +EQDP+++VA ET   T + +V GE+TT+A VD + IVR T   IG+     G D + C V+ +I  QSPDIA GV+     + ++        IGAGDQG MFGYAT+ETPEFMPL  VLA +L  RL++VRK     +LRPDGKTQVTVEY +D     P+R+ T+LIS QHD  VT +E+   L EHVIKP IPE+Y
Sbjct:    4 LFTSESVTEGHPDKVADQISDAILDALIEQDPDARVAVETLVTTGLAVVAGEVTTEAYVDIQDIVRRTILDIGYTRAKYGFDGETCGVVTSIHSQSPDIALGVNKALEAKEKNDDGDEFDKIGAGDQGMMFGYATNETPEFMPLPIVLAHQLAMRLSKVRKEKIVPFLRPDGKTQVTVEYSDDG---KPMRIDTILISAQHDPNVTINELKEVLLEHVIKPTIPEQY 227          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_PSEA6 (S-adenosylmethionine synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=metK PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.452e-61
Identity = 125/224 (55.80%), Postives = 155/224 (69.20%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M   LFTSESV+EGHPDK+ DQISDAVLDA L+QDP+++VACET  KT MVMV GE+TT A VD E++ R+T R IG+   D+G DAD C VL  I +QSPDI QGV      RPED GAGDQG MFGYA+DET   MP     A +L  R  E+RK+    WLRPD K+QVT   Y DN   VPV +  V++STQH ++VT +++   + E +IKPV+P K+L
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILKQDPKARVACETYVKTGMVMVGGEVTTNAWVDIEELTRNTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RTRPEDQGAGDQGLMFGYASDETDVLMPAPVTYAHRLVKRQAEIRKSGQLDWLRPDAKSQVTF-VYEDN---VPVGIDAVVLSTQHCDSVTTEQLREAVMEEIIKPVLPAKWL 217          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_ALKOO (S-adenosylmethionine synthetase OS=Alkaliphilus oremlandii (strain OhILAs) GN=metK PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.452e-61
Identity = 127/228 (55.70%), Postives = 151/228 (66.23%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP ++VACET   T +V+V GEITTK  VD  KIVR T   IG+     G D+D C VL  I +QS DIA GV        G      E IGAGDQG MFG+A +ETPE MPL   LA KL  RL++VRK+ T  +LRPDGKTQVTVEY  D     PVRV T++ISTQH   V    I  D+ EHV++ ++P + LD
Sbjct:    5 LFTSESVTEGHPDKMCDQISDAILDAILEKDPAARVACETSVSTGLVLVAGEITTKCYVDIPKIVRKTIEEIGYTRAKYGFDSDTCAVLTAINEQSADIALGVDEALESKKGEHRDELEAIGAGDQGIMFGFACNETPELMPLPISLAHKLAKRLSDVRKDGTIGYLRPDGKTQVTVEYDGDK----PVRVDTIVISTQHGPEVDAATIEKDMIEHVVQKIVPAELLD 228          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_BACA2 (S-adenosylmethionine synthetase OS=Bacillus amyloliquefaciens (strain FZB42) GN=metK PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.509e-61
Identity = 124/229 (54.15%), Postives = 153/229 (66.81%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            LFTSESV EGHPDK+CDQISD++LD  L+ DP ++VACET   T +V+V GEITT   VD  K VR+T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFGYA +ET E MPL   LA KL  RL+EVRK     +LRPDGKTQVTVEY  +N    PVR+  ++ISTQH   +T ++I  +LKEHVI PV+PE+ +D
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKNDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRETIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGTMSDAEIEAIGAGDQGLMFGYACNETKELMPLPISLAHKLARRLSEVRKEDILPYLRPDGKTQVTVEYDENN---KPVRIDAIVISTQHHPEITLEQIQRNLKEHVINPVVPEELID 232          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_BACSU (S-adenosylmethionine synthetase OS=Bacillus subtilis GN=metK PE=3 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 1.004e-60
Identity = 123/229 (53.71%), Postives = 153/229 (66.81%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            LFTSESV EGHPDK+CDQISD++LD  L++DP ++VACET   T +V+V GEITT   VD  K VR T + IG+     G DA+ C VL +I++QS DIA GV      R         E IGAGDQG MFGYA +ET E MPL   LA KL  RL+EVRK     +LRPDGKTQVTVEY  +N    PVR+  ++ISTQH   +T ++I  ++KEHVI PV+PE+ +D
Sbjct:    7 LFTSESVTEGHPDKICDQISDSILDEILKKDPNARVACETSVTTGLVLVSGEITTSTYVDIPKTVRQTIKEIGYTRAKYGFDAETCAVLTSIDEQSADIAMGVDQALEAREGTMSDEEIEAIGAGDQGLMFGYACNETKELMPLPISLAHKLARRLSEVRKEDILPYLRPDGKTQVTVEYDENN---KPVRIDAIVISTQHHPEITLEQIQRNIKEHVINPVVPEELID 232          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LACH4 (S-adenosylmethionine synthetase OS=Lactobacillus helveticus (strain DPC 4571) GN=metK PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.312e-60
Identity = 129/233 (55.36%), Postives = 158/233 (67.81%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-HGHFTKRPE-------DIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            ME  LFTSESV+EGHPDK+ DQISDA+LDA LE+DP S VACET   T MV VFGEI+T A VD + +VR T   IG+   ++G D ++C V+V+I++QSPDIA GV H   T+  E        IGAGDQG MFG+A  ETPE MPL   LA +L  R+  +RK+ T  WLRPD K QVTVEY  +N    P+RV TV+ISTQ D  V+N EI   + + VIK VIP +YLD
Sbjct:    1 MERRLFTSESVSEGHPDKVADQISDAILDAMLEKDPNSHVACETIVTTGMVFVFGEISTNAYVDIQDVVRKTILRIGYDRPELGFDGNNCAVMVDIDEQSPDIAGGVDHSLETRENESDQDELDQIGAGDQGLMFGFAIKETPELMPLPISLAHRLMRRVASLRKDHTLDWLRPDAKAQVTVEYDENNN---PLRVDTVVISTQTDAEVSNKEIRRAMIDLVIKEVIPARYLD 230          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_THEAB (S-adenosylmethionine synthetase OS=Thermosipho africanus (strain TCF52B) GN=metK PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.713e-60
Identity = 127/230 (55.22%), Postives = 155/230 (67.39%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP---------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            LFTSESV EGHPDK+ DQISDA+LDA LEQDP+S+VA ET   T + +V GE+TT+A VD + IVR T   IG+     G D + C VL +I  QSPDIA GV      +          E +GAGDQG MFGYAT+ET E+MPL  +L+ KL  +L+EVRKN T  +LRPDGKTQVT+EY  ++    PVRV TVLISTQH+  VT  EI   L +HVI P+IPE+  D
Sbjct:    4 LFTSESVTEGHPDKVADQISDAILDAMLEQDPKSRVAVETLVTTGIAIVSGEVTTRAYVDIQDIVRKTILDIGYTRAKYGFDGETCAVLSSIHSQSPDIALGVDKALEAKEGELIAEDELEQVGAGDQGMMFGYATNETKEYMPLPIMLSHKLAMKLSEVRKNGTLPFLRPDGKTQVTIEYDEND---KPVRVDTVLISTQHEPDVTISEIKEALIKHVIDPIIPEELRD 230          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_GEOUR (S-adenosylmethionine synthetase OS=Geobacter uraniireducens (strain Rf4) GN=metK PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.922e-60
Identity = 121/229 (52.84%), Postives = 162/229 (70.74%), Query Frame = 2
Query:   74 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            +M+ F+FTSESV+EGHPDK+ DQ+SDA+LDA L QDP+S+VACET   T M +V GEITT A VDY KIVR+T + IG+    +G D + C VL +I++QSPDIAQGV    G F ++    GAGDQG MFGYA +ETPE MP+S +L+ KL  +L +VRK+    +LRPD K+QV+++Y ND     PV V TV+IS+QH   V+ + I   + E V+K +IPE+ +D
Sbjct:    2 EMKDFIFTSESVSEGHPDKVADQVSDAILDAILTQDPKSRVACETLVTTGMTVVAGEITTNAIVDYPKIVRETIKEIGYNDSAMGFDWETCAVLTSIDKQSPDIAQGVTEGEGLFKEQ----GAGDQGLMFGYACNETPELMPMSILLSHKLVKKLADVRKSGVLDFLRPDSKSQVSIQYINDR----PVHVDTVVISSQHTPEVSYETIKEGIIEEVVKKIIPEELMD 222          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_DESHD (S-adenosylmethionine synthetase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=metK PE=3 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.922e-60
Identity = 124/229 (54.15%), Postives = 153/229 (66.81%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFTKRP-EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            LFTSESV EGHPDK+CDQISDA+LDA   +DP ++VACET   T +V+V GEITT   VD    VR T R IG+     G DAD C VL +I +QS DIA GV       +G  ++   E IGAGDQG MFGYAT+ET  +MPL+  LA +L  RL+EVRK+    +LRPDGKTQVTVEY ++     PVR+ T++ISTQH    T + I  DL EHV+ PV+P + LD
Sbjct:    5 LFTSESVTEGHPDKICDQISDAILDAIFAKDPNARVACETSVTTGLVLVSGEITTNCYVDIPSTVRQTIREIGYTRAKYGFDADTCAVLTSIGEQSADIALGVDRALEAKNGEMSEEEIEAIGAGDQGMMFGYATNETESYMPLAIDLAHRLARRLSEVRKSDILDYLRPDGKTQVTVEYEDNR----PVRIDTIVISTQHHPEATQERIRRDLLEHVVFPVVPSELLD 229          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_PHOLL (S-adenosylmethionine synthetase OS=Photorhabdus luminescens subsp. laumondii GN=metK PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.817e-60
Identity = 124/225 (55.11%), Postives = 154/225 (68.44%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            M T+LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITT A VD E+I R T R IG+V+ ++G DA+ C VL  I +QSPDI QGV     + P   GAGDQG MFGYAT+ET   MP     A +L  R  EVRKN    WLRPD K+QVT +Y ND      V V  V++STQH E ++  ++   + E +IKPV+P ++L+
Sbjct:    1 MTTYLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVNSEMGFDANSCAVLSAIGKQSPDINQGVD---REDPLQQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGVLPWLRPDAKSQVTFQYNNDK----IVGVDAVVLSTQHAENISQKDLQEAVMEEIIKPVLPAEWLN 218          
The following BLAST results are available for this feature:
BLAST of CF832474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_THELT3.452e-6155.07S-adenosylmethionine synthetase OS=Thermotoga lett... [more]
METK_PSEA63.452e-6155.80S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_ALKOO3.452e-6155.70S-adenosylmethionine synthetase OS=Alkaliphilus or... [more]
METK_BACA24.509e-6154.15S-adenosylmethionine synthetase OS=Bacillus amylol... [more]
METK_BACSU1.004e-6053.71S-adenosylmethionine synthetase OS=Bacillus subtil... [more]
METK_LACH41.312e-6055.36S-adenosylmethionine synthetase OS=Lactobacillus h... [more]
METK_THEAB1.713e-6055.22S-adenosylmethionine synthetase OS=Thermosipho afr... [more]
METK_GEOUR2.922e-6052.84S-adenosylmethionine synthetase OS=Geobacter urani... [more]
METK_DESHD2.922e-6054.15S-adenosylmethionine synthetase OS=Desulfitobacter... [more]
METK_PHOLL3.817e-6055.11S-adenosylmethionine synthetase OS=Photorhabdus lu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832474 ID=CF832474; Name=CF832474; organism=Citrus sinensis; type=EST; length=751bp
CTTTGCTATTGCGGTCTGGTCTTAAGTCTGAATCTTAGATCTGCGCCGAA
ACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCTATTCACCTCT
GAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGATCTCTGA
TGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGCAAGGTTGCCT
GTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACC
ACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTGCCGTTC
CATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCGATCACTGCAAAG
TCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCCCAGGGTGTTCAT
GGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCA
TATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCC
ATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAAT
AGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGA
GTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCC
TCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCT
GACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGA
T
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