CF832474

Overview
NameCF832474
Unique NameCF832474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_CHLSY (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.985e-60
Identity = 127/230 (55.22%), Postives = 154/230 (66.96%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEIT-TKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            F FTSESV+EGHPDK+CDQISDA+LDA L  DP+++VA ET T T +++V GE+T  +  +  E+IVR T + IG+ S + G DAD C V+V I  QSPDIA GV        G      E +GAGDQG MFG+A DETPE MP S  LA +L  RL  VRK+ T  +LRPD K+QVTVEY        PVRV TVLIS+QH   +T D+I ADL EHVIK  IPE +LD
Sbjct:   11 FYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVVLGEVTYERGYIPIEEIVRRTVKEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGVDKALEAKIGAMADDVEAVGAGDQGMMFGFACDETPELMPASIALAHRLIRRLERVRKDGTLPYLRPDAKSQVTVEYSFGK----PVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLD 236          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_CHLAA (S-adenosylmethionine synthetase OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=metK PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.985e-60
Identity = 127/230 (55.22%), Postives = 154/230 (66.96%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEIT-TKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH-------GHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            F FTSESV+EGHPDK+CDQISDA+LDA L  DP+++VA ET T T +++V GE+T  +  +  E+IVR T + IG+ S + G DAD C V+V I  QSPDIA GV        G      E +GAGDQG MFG+A DETPE MP S  LA +L  RL  VRK+ T  +LRPD K+QVTVEY        PVRV TVLIS+QH   +T D+I ADL EHVIK  IPE +LD
Sbjct:   11 FYFTSESVSEGHPDKMCDQISDAILDAFLSHDPKARVAVETATTTGLIVVLGEVTYERGYIPIEEIVRRTVKEIGYTSAEYGFDADTCGVMVAIHGQSPDIAMGVDKALEAKIGAMADDVEAVGAGDQGMMFGFACDETPELMPASIALAHRLIRRLERVRKDGTLPYLRPDAKSQVTVEYSFGK----PVRVDTVLISSQHAPDITQDQIRADLIEHVIKTEIPEAWLD 236          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_STRGC (S-adenosylmethionine synthetase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metK PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 6.510e-60
Identity = 131/232 (56.47%), Postives = 160/232 (68.97%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH------GHFTKRPED-IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEY-YNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP++ VA ET   T  V VFGEI+T A VD  ++VRDT   IG+ + + G  A+   V  ++ +QSPDIAQGV+      G+  + P D IGAGDQG MFG+A DETPE MPL   L+ KL  RL E+RK+   S+LRPD K+QVTVEY  ND+    PVRV TV+ISTQHD   TN+EI  D+ E VIK VIP +YLD
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAVLSQDPDAHVAAETAVYTGSVHVFGEISTTAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETPELMPLPISLSHKLVRRLAELRKSGEISYLRPDAKSQVTVEYDENDH----PVRVDTVVISTQHDPEATNEEIHRDVIEKVIKAVIPAQYLD 230          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 6.510e-60
Identity = 122/225 (54.22%), Postives = 155/225 (68.89%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            M T LFTSESV+EGHPDK+ DQISDAVLDA LEQDP+++VACET  KT MVMV GEITTKA VD E+I R T R IG+ S D+G DA+ C V+  I +QSPDI QGV       P + GAGDQG MFGYAT+ET   MP     A +L  R  +VRKN T  WLRPD K+Q+T +Y N+N     V +  V++STQH E ++  ++   + E +IKP++P ++L+
Sbjct:    1 MTTHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVMVGGEITTKAWVDIEEITRKTVREIGYTSSDMGFDANSCAVISAIGKQSPDINQGVD---RADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAQVRKNGTLPWLRPDAKSQITFQYDNNN----IVGIDAVVLSTQHAEDISQKDLHEAVMEEIIKPILPTEWLN 218          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_CLOAB (S-adenosylmethionine synthetase OS=Clostridium acetobutylicum GN=metK PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 6.510e-60
Identity = 122/227 (53.74%), Postives = 151/227 (66.52%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            LFTSESV EGHPDK+CDQISDA+LDA LE+DP  +VACET   T +V V GEI+T   VD  KIVR T R IG+     G D D C V+ +I++QS DIA GV      +       + +GAGDQG MFGYAT+ET EFMP+   LA +L  RL EVRK+ T  +LRPDGKTQVT+EY +D     PVRV  ++ISTQH   + +++I  DL E V+K VI  + LD
Sbjct:    4 LFTSESVTEGHPDKICDQISDAILDAILEKDPNGRVACETTVTTGIVNVMGEISTNCYVDIPKIVRKTVREIGYTRAKYGFDCDTCAVVTSIDEQSADIAMGVDEALESKKGEMDKIDAVGAGDQGMMFGYATNETKEFMPMPIALAHRLSRRLAEVRKDGTLDYLRPDGKTQVTIEYEDDK----PVRVDAIVISTQHGPEIGHEQIEKDLIEKVVKYVISPELLD 226          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_PEDPA (S-adenosylmethionine synthetase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=metK PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 8.503e-60
Identity = 124/231 (53.68%), Postives = 160/231 (69.26%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-------HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            E  LFTSESV+EGHPDK+ DQISD++LD  L+ DP+++VACET   T +V+V GEI+T A +D +K+VR T + IG+V  + G D ++C V+V I++QSPDIAQGV        GH   R   IGAGDQG MFGYAT+ET E MPL  +L+  L  R+ ++RK    S+LRPD K +VTVE Y+DN    PVRV TV++STQHD  VT ++I  D+ E VIK VIP   LD
Sbjct:    3 ERHLFTSESVSEGHPDKIADQISDSILDELLKNDPDARVACETTVTTGLVVVVGEISTTAYIDIQKVVRKTIKDIGYVGGEYGFDGENCAVIVAIDEQSPDIAQGVDDSLETREGH-EDRLNQIGAGDQGLMFGYATNETEELMPLPIMLSHHLMQRIAKLRKEQVISYLRPDAKAEVTVE-YDDNDH--PVRVDTVVLSTQHDPDVTLEQIRQDVIEQVIKAVIPATLLD 229          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LISIN (S-adenosylmethionine synthetase OS=Listeria innocua GN=metK PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 8.503e-60
Identity = 122/229 (53.28%), Postives = 152/229 (66.38%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            LFTSESV++GHPDK+ DQISDA+LDA + +DP+++VACET   T +V+V GEITT   VD  KIVRDT + IG+     G DA+ C VL  I++QSPDIAQGV      R         E IGAGDQG MFG+ATDET E MPL   LA  L  +LTE+RK +   +LRPD KTQVTVEY   N    PVR+ T+++STQH   +T ++IA DL  H+   VI   +LD
Sbjct:    7 LFTSESVSDGHPDKIADQISDAILDAIISKDPDARVACETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQSPDIAQGVDEALESRSGSEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLARKLTELRKTNKLDYLRPDAKTQVTVEYDEFN---QPVRIDTIVVSTQHHPDITQEQIAKDLHTHLFPEVIDASFLD 232          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LACAC (S-adenosylmethionine synthetase OS=Lactobacillus acidophilus GN=metK PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 8.503e-60
Identity = 126/233 (54.08%), Postives = 158/233 (67.81%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            ME  LFTSESV+EGHPDK+ DQISDA+LDA L++DP S VACET   T MV VFGEI+T A VD + +VR T   IG+   ++G D ++C V+V+I++QSPDIA GV      R         + IGAGDQG MFG+A  ETPE MPL   L+ +L  R+  +RK+ T  WLRPD K QVTVE Y++NG   P+ V TV+ISTQ D  V+N+EI   + + VIK VIP KYLD
Sbjct:    1 MEKRLFTSESVSEGHPDKVADQISDAILDAMLKKDPNSHVACETIVTTGMVFVFGEISTSAYVDIQDVVRKTILKIGYDRPELGFDGNNCAVMVDIDEQSPDIADGVDHSLETRENKSDNDELDQIGAGDQGLMFGFAIKETPELMPLPISLSHRLMRRVASLRKDHTLEWLRPDAKAQVTVE-YDENGK--PLCVDTVVISTQTDAEVSNEEICRAMIDLVIKEVIPAKYLD 230          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_BIFLI (S-adenosylmethionine synthetase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metK PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 8.503e-60
Identity = 128/226 (56.64%), Postives = 154/226 (68.14%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---------HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE 739
            L ++ESV EGHPDK+CDQISDA+LD  L QDP S VA ET   T + +VFGE+T+K   D +  VR+T R+IG+ S +VGLDAD C V+V I +QS +I QGV              +R E  GAGDQG MFGYATDETP  MPL   LA +L  RLTEVRK+     LRPDGKTQVT+E Y+DN    PVR+ TVLISTQHD  VT D +A +LK+HVI PV+ E
Sbjct:    7 LISAESVTEGHPDKVCDQISDAILDDLLVQDPSSHVAVETSAATGVFLVFGEVTSKGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGVARLTGDQETAASREERYEAQGAGDQGVMFGYATDETPTLMPLPIYLAHRLAFRLTEVRKSGEVPHLRPDGKTQVTIE-YDDNDK--PVRLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDE 229          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_KOSOT (S-adenosylmethionine synthetase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=metK PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.110e-59
Identity = 123/230 (53.48%), Postives = 153/230 (66.52%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED------IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M+ +LFTSESV EGHPDK+ DQ+SDA+LDA LEQDPES+VA ET   T + +V GE+TTKA VD  +IVRDT   IG+     G D + C VL +I++QSPDIA GV+     + +       IGAGDQG MFGYAT+ET E MPL  VLA  L  RL  VRK       RPDGKTQVTV Y +      P+ V T+++STQHD  +T +EI   +KEHVIK V+PE+ +
Sbjct:    1 MKKWLFTSESVTEGHPDKIADQVSDAILDAMLEQDPESRVAVETLVATGVAVVAGEVTTKAYVDIPRIVRDTILEIGYTRAKFGFDGETCAVLTSIDEQSPDIALGVNKSLEAKNDGKDKYDIIGAGDQGMMFGYATNETEEMMPLPIVLAHNLARRLATVRKERIVEGFRPDGKTQVTVLYEDGK----PIGVKTIVVSTQHDPAMTQEEIEQLVKEHVIKAVVPEEMM 226          
The following BLAST results are available for this feature:
BLAST of CF832474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CHLSY4.985e-6055.22S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_CHLAA4.985e-6055.22S-adenosylmethionine synthetase OS=Chloroflexus au... [more]
METK_STRGC6.510e-6056.47S-adenosylmethionine synthetase OS=Streptococcus g... [more]
METK_PROMH6.510e-6054.22S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_CLOAB6.510e-6053.74S-adenosylmethionine synthetase OS=Clostridium ace... [more]
METK_PEDPA8.503e-6053.68S-adenosylmethionine synthetase OS=Pediococcus pen... [more]
METK_LISIN8.503e-6053.28S-adenosylmethionine synthetase OS=Listeria innocu... [more]
METK_LACAC8.503e-6054.08S-adenosylmethionine synthetase OS=Lactobacillus a... [more]
METK_BIFLI8.503e-6056.64S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_KOSOT1.110e-5953.48S-adenosylmethionine synthetase OS=Kosmotoga olear... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832474 ID=CF832474; Name=CF832474; organism=Citrus sinensis; type=EST; length=751bp
CTTTGCTATTGCGGTCTGGTCTTAAGTCTGAATCTTAGATCTGCGCCGAA
ACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCTATTCACCTCT
GAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGATCTCTGA
TGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGCAAGGTTGCCT
GTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACC
ACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTGCCGTTC
CATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCGATCACTGCAAAG
TCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCCCAGGGTGTTCAT
GGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCA
TATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCC
ATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAAT
AGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGA
GTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCC
TCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCT
GACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGA
T
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