CF832491

Overview
NameCF832491
Unique NameCF832491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF832491_ssr319 microsatellite CF832491_ssr319:319..336. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1105..1928. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_NOCFA (Adenosylhomocysteinase OS=Nocardia farcinica GN=ahcY PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.341e-48
Identity = 99/160 (61.88%), Postives = 117/160 (73.12%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDII + HMK MK+ AI+ NIGHFDNEID+  LE   G  R+TIKPQ D W F E+   IIVL+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTK+QA+YI V  +GPYKP HYRY
Sbjct:  338 GNKDIITLDHMKAMKDQAILGNIGHFDNEIDMAALER-SGATRLTIKPQVDLWTFGESGKSIIVLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKPE--EYDNEVYRLPKHLDEKVARIHVEALGGTLTKLTKDQAEYIGVDVEGPYKPEHYRY 494
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTU (Adenosylhomocysteinase OS=Mycobacterium tuberculosis GN=ahcY PE=1 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.341e-48
Identity = 97/160 (60.62%), Postives = 117/160 (73.12%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIM+ H+K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  339 GNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTA (Adenosylhomocysteinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ahcY PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.341e-48
Identity = 97/160 (60.62%), Postives = 117/160 (73.12%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIM+ H+K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  339 GNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBT (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ahcY PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.341e-48
Identity = 97/160 (60.62%), Postives = 117/160 (73.12%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIM+ H+K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  339 GNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBP (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.341e-48
Identity = 97/160 (60.62%), Postives = 117/160 (73.12%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIM+ H+K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  339 GNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBO (Adenosylhomocysteinase OS=Mycobacterium bovis GN=ahcY PE=1 SV=3)

HSP 1 Score: 193.356 bits (490), Expect = 1.341e-48
Identity = 97/160 (60.62%), Postives = 117/160 (73.12%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIM+ H+K MK++AI+ NIGHFDNEID+ GLE   G  R+ +KPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  339 GNKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLER-SGATRVNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_BACTN (Adenosylhomocysteinase OS=Bacteroides thetaiotaomicron GN=ahcY PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.902e-48
Identity = 99/160 (61.88%), Postives = 118/160 (73.75%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN DII + HM+KMK+ AIVCNIGHFDNEI V  L+ Y G+K + IKPQ DR+ FP+ +S I++LA+GRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+ +    KYE  VY LPKHLDE+V           LT+LT EQA YI VS DGPYK  HYRY
Sbjct:  322 GNIDIIRIDHMEKMKDQAIVCNIGHFDNEIQVDALKHYSGIKCVNIKPQVDRYYFPDGHS-ILLLADGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFNK----KYEVNVYRLPKHLDEEVARLHLEKIGVKLTKLTPEQAAYIGVSVDGPYKAEHYRY 476
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_CHLCH (Adenosylhomocysteinase OS=Chlorobium chlorochromatii (strain CaD3) GN=ahcY PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.655e-48
Identity = 99/160 (61.88%), Postives = 117/160 (73.12%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKD+I + HMK+M++ AIVCNIGHFDNEI V  L   P VK I IKPQ D+++FP  N  + +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW++    +Y   VY LPK LDE+V           LTRLT EQA+YI VSADGPYKP HYRY
Sbjct:  317 GNKDVITLEHMKQMRDEAIVCNIGHFDNEIQVDKLNNDPTVKIINIKPQVDKYIFPNGNC-MYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWQK----EYAVDVYRLPKALDEEVARLHLEQIGVRLTRLTPEQAEYIGVSADGPYKPEHYRY 471
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.483e-47
Identity = 96/160 (60.00%), Postives = 116/160 (72.50%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIM+ H+K MK+++I+ NIGHFDNEID+ GLE   G  R  IKPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTK+QA+Y+ V  +GPYKP HYRY
Sbjct:  336 GNKDIIMLEHIKAMKDHSILGNIGHFDNEIDMAGLER-SGATRTNIKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.483e-47
Identity = 96/160 (60.00%), Postives = 116/160 (72.50%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDIIM+ H+K MK+++I+ NIGHFDNEID+ GLE   G  R  IKPQ D W F +T   IIVL+EGRL+NLG ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV           LT+LTK+QA+Y+ V  +GPYKP HYRY
Sbjct:  336 GNKDIIMLEHIKAMKDHSILGNIGHFDNEIDMAGLER-SGATRTNIKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492
The following BLAST results are available for this feature:
BLAST of CF832491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
SAHH_NOCFA1.341e-4861.88Adenosylhomocysteinase OS=Nocardia farcinica GN=ah... [more]
SAHH_MYCTU1.341e-4860.63Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCTA1.341e-4860.63Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCBT1.341e-4860.63Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBP1.341e-4860.63Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]
SAHH_MYCBO1.341e-4860.63Adenosylhomocysteinase OS=Mycobacterium bovis GN=a... [more]
SAHH_BACTN3.902e-4861.88Adenosylhomocysteinase OS=Bacteroides thetaiotaomi... [more]
SAHH_CHLCH6.655e-4861.88Adenosylhomocysteinase OS=Chlorobium chlorochromat... [more]
SAHH_MYCUA1.483e-4760.00Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCMM1.483e-4760.00Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832491 ID=CF832491; Name=CF832491; organism=Citrus sinensis; type=EST; length=824bp
GGGGTGCGGGCCCCACGAGTTTTTTTTTTTTTTTTATAATCATTCATCAG
TAAACAATAAGGATAACCTTATGCAGCAAAGCAAGCAAAACTTAAAACTG
CATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAAA
TCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAAC
TTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCCT
ACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCT
TTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCT
GTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCAG
CCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGA
AGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCTT
CTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCA
CCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGCA
CATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGTT
GGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGCT
TAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAAG
TGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGNC
AACCATGATGATGTCCTTGTTACC
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