CF832491

Overview
NameCF832491
Unique NameCF832491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF832491_ssr319 microsatellite CF832491_ssr319:319..336. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1105..1928. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_MYCSK (Adenosylhomocysteinase OS=Mycobacterium sp. (strain KMS) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.769e-46
Identity = 97/160 (60.62%), Postives = 116/160 (72.50%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDII + HMK MK+ AI+ NIGHFDNEID+  LE   G  RI IKPQ D W F + +S I++L+EGRL+NLG ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+  VY L KHLDEKV           LT+LTKEQA+YI+V  +GPYKP HYRY
Sbjct:  334 GNKDIITLDHMKAMKDKAILGNIGHFDNEIDMAALER-SGATRINIKPQVDEWTFDDGHS-IVLLSEGRLLNLGNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNAVYRLAKHLDEKVARIHVEALGGTLTKLTKEQAEYINVDVEGPYKPEHYRY 489
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBL (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.769e-46
Identity = 94/160 (58.75%), Postives = 115/160 (71.88%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN DII + HMK MK+ AI+CNIGHFD EI +  L +  GV +  IKPQ D++ FP+  S I+VLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV           LT+L ++QADY+ V  +GP+KP +YRY
Sbjct:  282 GNDDIITLEHMKAMKDGAILCNIGHFDTEIQMSRLNSEKGVTKKEIKPQVDKYTFPDGKS-IVVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPLNGPFKPENYRY 436
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBJ (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.769e-46
Identity = 94/160 (58.75%), Postives = 115/160 (71.88%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN DII + HMK MK+ AI+CNIGHFD EI +  L +  GV +  IKPQ D++ FP+  S I+VLAEGRL+NLGCATGHPSFVMSCSFTNQV+AQ+EL+      KYE  VY LPKHLDEKV           LT+L ++QADY+ V  +GP+KP +YRY
Sbjct:  282 GNDDIITLEHMKAMKDGAILCNIGHFDTEIQMSRLNSEKGVTKKEIKPQVDKYTFPDGKS-IVVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELY----NNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPLNGPFKPENYRY 436
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_CHLL2 (Adenosylhomocysteinase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.769e-46
Identity = 92/160 (57.50%), Postives = 115/160 (71.88%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKD+I + HMK+M++ AIVCNIGHFDNEI V  L ++ G  ++ IKPQ D++ F E+ + I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW    T +Y   VY LPK LDE+V           LT L+KEQADY+ +  +GPYKP HYRY
Sbjct:  317 GNKDVITLEHMKQMRDEAIVCNIGHFDNEIQVEQLNSFAGATKLNIKPQVDKYTF-ESGNSIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW----TKEYSIDVYRLPKELDEEVARLHLGQLGVKLTTLSKEQADYLGIPVEGPYKPDHYRY 471
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_PELPB (Adenosylhomocysteinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.229e-46
Identity = 97/160 (60.62%), Postives = 111/160 (69.38%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKD+I + HMK+MK+ AIVCNIGHFDNEI V  L  Y G  R+ IKPQ D++ F E  + I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELW    T  Y   VY LPK LDE+V           LTRL+ EQA YI V  DGPYKP HYRY
Sbjct:  317 GNKDVITLEHMKQMKDEAIVCNIGHFDNEIQVEQLYAYAGATRLNIKPQVDKYTF-ENGNCIYLLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELW----TKDYAVGVYRLPKELDEEVARLHLEQLGVKLTRLSDEQAAYIGVPLDGPYKPEHYRY 471
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_DESVM (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.229e-46
Identity = 97/160 (60.62%), Postives = 112/160 (70.00%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   HM+ MK+ AIVCNIGHFDNEID+  LET PG   + IKPQ D+W   ++   IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY+LPK LDE+V           LT LTKEQADYI V  DGPYKP HYRY
Sbjct:  324 GNYKVITGEHMEAMKDEAIVCNIGHFDNEIDMHYLETTPGCTCLNIKPQVDKWTL-KSGRSIIVLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIEL---ATNPDLERKVYILPKKLDEQVARLHLARLGVTLTTLTKEQADYIGVPVDGPYKPGHYRY 479
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFM (Adenosylhomocysteinase OS=Xylella fastidiosa (strain M12) GN=ahcY PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.135e-46
Identity = 91/160 (56.88%), Postives = 112/160 (70.00%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKD+I + HM  MK+  IVCNIGHFDNEI V  L T  GV++I IKPQ D+++ P  N+ + +LAEGRL+NLGCATGHPSFVMS SF NQ +AQ++LW+ K    YEK VY LPK LDE+V           LT LT  QA Y+ +S +GP+KP HYRY
Sbjct:  324 GNKDVIRIEHMTAMKDQVIVCNIGHFDNEIQVDALNTLTGVQKINIKPQVDKFILPNGNT-LFLLAEGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWQNKDV--YEKNVYRLPKKLDEEVARLHLEKIGVKLTTLTANQAAYLGISVEGPFKPEHYRY 480
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_PROVI (Adenosylhomocysteinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ahcY PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.388e-45
Identity = 96/160 (60.00%), Postives = 110/160 (68.75%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKD+I + HMK+M + AIVCNIGHFDNEI V  L  Y G  ++ IKPQ D++ F E    I +LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+ELWK      YE  VY LPK LDE+V           LT L+KEQADYI V   GPYKP HYRY
Sbjct:  317 GNKDVITLEHMKQMPDEAIVCNIGHFDNEIQVEPLNEYKGATKLNIKPQVDKYTF-EDGHCIYMLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELWK----NDYEIGVYRLPKALDEEVARLHLEQIGVKLTTLSKEQADYIGVPVSGPYKPEHYRY 471
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_HALHL (Adenosylhomocysteinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.367e-45
Identity = 100/160 (62.50%), Postives = 114/160 (71.25%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN ++I   HMK MK+ AIVCNIGHFDNEIDV  L+ Y   K   IKPQ D   FP+    I +LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+   + GKYEK VYVLPKHLDEKV           LTRL++EQA YI VS DGP+KP  YRY
Sbjct:  277 GNYNVITHDHMKAMKDEAIVCNIGHFDNEIDVASLKQY---KWDEIKPQVDHVEFPDGKK-ITLLAEGRLVNLGCATGHPSFVMSNSFTNQVMAQMELYN--NPGKYEKDVYVLPKHLDEKVAALHLGRVGANLTRLSEEQAGYIGVSVDGPFKPEWYRY 430
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_XYLFT (Adenosylhomocysteinase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ahcY PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.091e-45
Identity = 90/160 (56.25%), Postives = 111/160 (69.38%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKD+I + HM  MK+  IVCNIGHFDNEI V  L    GV++I IKPQ D+++ P  N+ + +LAEGRL+NLGCATGHPSFVMS SF NQ +AQ++LW+ K    YEK VY LPK LDE+V           LT LT  QA Y+ +S +GP+KP HYRY
Sbjct:  324 GNKDVIRIEHMTAMKDQVIVCNIGHFDNEIQVDALNALTGVQKINIKPQVDKFILPNGNT-LFLLAEGRLVNLGCATGHPSFVMSNSFANQTLAQIDLWQNKDV--YEKNVYRLPKKLDEEVARLHLEKIGVKLTTLTANQAAYLGISVEGPFKPEHYRY 480
The following BLAST results are available for this feature:
BLAST of CF832491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
SAHH_MYCSK4.769e-4660.63Adenosylhomocysteinase OS=Mycobacterium sp. (strai... [more]
SAHH_LEPBL4.769e-4658.75Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_LEPBJ4.769e-4658.75Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_CHLL24.769e-4657.50Adenosylhomocysteinase OS=Chlorobium limicola (str... [more]
SAHH_PELPB6.229e-4660.63Adenosylhomocysteinase OS=Pelodictyon phaeoclathra... [more]
SAHH_DESVM6.229e-4660.63Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_XYLFM8.135e-4656.88Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]
SAHH_PROVI1.388e-4560.00Adenosylhomocysteinase OS=Prosthecochloris vibriof... [more]
SAHH_HALHL2.367e-4562.50Adenosylhomocysteinase OS=Halorhodospira halophila... [more]
SAHH_XYLFT3.091e-4556.25Adenosylhomocysteinase OS=Xylella fastidiosa (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832491 ID=CF832491; Name=CF832491; organism=Citrus sinensis; type=EST; length=824bp
GGGGTGCGGGCCCCACGAGTTTTTTTTTTTTTTTTATAATCATTCATCAG
TAAACAATAAGGATAACCTTATGCAGCAAAGCAAGCAAAACTTAAAACTG
CATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAAA
TCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAAC
TTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCCT
ACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCT
TTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCT
GTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCAG
CCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGA
AGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCTT
CTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCA
CCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGCA
CATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGTT
GGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGCT
TAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAAG
TGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGNC
AACCATGATGATGTCCTTGTTACC
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