CF832492

Overview
NameCF832492
Unique NameCF832492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1840 contig Csv1_Contig1840:230..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_CHLL2 (Adenosylhomocysteinase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.765e-59
Identity = 117/199 (58.79%), Postives = 137/199 (68.84%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R ++   +P KGA+ITGSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH              WKGE+L EYWWCT + L++  G GP+LIVDDGGDATL+IH G K E   E   K+P      NAE + +   +R+    D +++HK+   + GVSEETTTGV RLYQM E G LLFPAINVNDSV
Sbjct:   31 EMPGLMATRRKYAGQKPLKGARITGSLHMTIQTAVLIETLVDLGAEVRWASCNIFSTQDHAAAAIAAAGIPVFAWKGESLDEYWWCTRQILEFEDGKGPNLIVDDGGDATLMIHLGYKIENNPELLEKVP-----GNAEEKALYQQLREVYSEDTQRWHKVAAEMKGVSEETTTGVHRLYQMMEKGELLFPAINVNDSV 224          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_BACTN (Adenosylhomocysteinase OS=Bacteroides thetaiotaomicron GN=ahcY PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.792e-58
Identity = 119/203 (58.62%), Postives = 141/203 (69.46%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTD---NAEFQIVL-TIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R ++G S+P KGA+I GSLHMTIQTAVLIETL ALGAEVRWCSCNI+STQDH              WKGE L +YWWCT +AL++  G GP++IVDDGGDAT++IH G  AE          D A  D   +AE +I L  I++  L  D  ++H++ E + GVSEETTTGV RLYQMQE G LLFPA NVNDSV
Sbjct:   36 EMPGLMALREKYGESKPLKGARIMGSLHMTIQTAVLIETLVALGAEVRWCSCNIYSTQDHAAAAIAASGVAVFAWKGENLADYWWCTLQALNFPGGKGPNVIVDDGGDATMMIHVGYDAEN---------DAAVLDKEVHAEDEIELNAILKKVLAEDKTRWHRVAEEMRGVSEETTTGVHRLYQMQEEGKLLFPAFNVNDSV 229          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_STRAZ (Adenosylhomocysteinase OS=Streptomyces atroolivaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 2.341e-58
Identity = 115/200 (57.50%), Postives = 141/200 (70.50%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTII-RDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLM+ R E+  +QP  GA+ITGSLHMT+QTAVLIETL ALGA+VRW SCNI+STQDH              WKGETL+EYWWCTE+AL W    GP++I+DDGGDATLL+H+GV+    Y KTG LP+    +N E  +V  ++ R GL      +  M   + GV+EETTTGV RLY+M  +GTLLFPAINVND+V
Sbjct:   33 EMPGLMSIREEYAAAQPLAGARITGSLHMTVQTAVLIETLVALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAWKGETLEEYWWCTEQALTWPGHTGPNMILDDGGDATLLVHKGVE----YRKTGILPE---AENEELAVVRALLDRSGL-----DWTAMSSEIRGVTEETTTGVHRLYEMHRDGTLLFPAINVNDAV 220          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_PLACH (Adenosylhomocysteinase OS=Plasmodium chabaudi GN=PC000295.02.0 PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.214e-58
Identity = 108/201 (53.73%), Postives = 144/201 (71.64%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXX-WKGETLQEYWWCTEKALDWGPGG-GPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLM  R E+   +P KGAKITG LHMTI+TA+L+ETL  LGA++RWCSCNI+ST D+               W+GETL+EYWWC EKAL WG  G GPDLIVDDG DA+ L+H+G + E++YE+   LPDP +  N E +  L++I+  +  +PKK+  M ++++G+SEETTTGV R+ ++++N  LLF AINVNDSV
Sbjct:   27 EMPGLMTIREEYEKLKPLKGAKITGCLHMTIETALLMETLQKLGAKLRWCSCNIYSTLDYAAAAVSTLENVSVFAWRGETLEEYWWCVEKALTWGENGEGPDLIVDDGADASYLVHKGAEYEKLYEEKKILPDPETGKNEEERCFLSLIKSSILKNPKKWTNMSKKIIGMSEETTTGVLRVKKIEKNNGLLFTAINVNDSV 227          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_BACFR (Adenosylhomocysteinase OS=Bacteroides fragilis GN=ahcY PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 5.214e-58
Identity = 117/200 (58.50%), Postives = 140/200 (70.00%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVL-TIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R ++G S+P KGA+I GSLHMTIQTAVLIETL ALGAEVRWCSCNI+STQDH              WKGETL +YWWCT +AL++  G GP +IVDDGGDAT++IH G +AE       K        +AE +I L  I++  L  D +++H++   + GVSEETTTGV RLYQMQE G LLFPA NVNDSV
Sbjct:   47 EMPGLMALREKYGESKPLKGARIMGSLHMTIQTAVLIETLVALGAEVRWCSCNIYSTQDHAAAAIAASGVAVFAWKGETLADYWWCTLQALNFEGGKGPTVIVDDGGDATMMIHVGYEAENNAAVLDK------EVHAEDEIELNAILKKVLAEDKERWHRVAAEVRGVSEETTTGVHRLYQMQEEGKLLFPAFNVNDSV 240          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_DESVM (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ahcY PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.517e-57
Identity = 111/200 (55.50%), Postives = 140/200 (70.00%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH-XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            E+PGLM     +G S+P KG ++TGSLHMTIQTA+LI+TL  LGA++RW SCNIFSTQDH               WKGETL++YWWCTE AL W  G GPDL+VDDGGDATL+IH+GV+ E   E   +     + DN EFQI++  +    + DP ++ ++  R+ GVSEETTTGV RLYQ+++ G LLFPAINVNDSV
Sbjct:   37 EVPGLMELIRMYGVSKPLKGLRVTGSLHMTIQTAMLIKTLYELGADIRWASCNIFSTQDHAAAAIADSGMAKVFAWKGETLEDYWWCTEMALTWPDGSGPDLLVDDGGDATLMIHKGVEVENNPELLKQ-----AYDNKEFQIIMDRLALAYQNDPGRWQRVAARVRGVSEETTTGVHRLYQLEQEGKLLFPAINVNDSV 231          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_DESVV (Adenosylhomocysteinase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.981e-57
Identity = 111/204 (54.41%), Postives = 140/204 (68.63%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH-XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPA----STDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLM    ++G ++P KG K+TGSLHMTIQTA+LI TL  LGA++RW SCNIFSTQDH               WKGETL++YWWCTE AL W  G GPDL+VDDGGDATL IH+GV+ E          DP+    + DN EFQI++  +    + DP ++ ++  ++ GVSEETTTGV RLYQ+++ G LLFPAINVND+V
Sbjct:   37 EMPGLMELIRKYGGTKPLKGLKVTGSLHMTIQTAMLIRTLYELGADIRWASCNIFSTQDHAAAAIAASGMAKVFAWKGETLEDYWWCTEMALTWPDGSGPDLLVDDGGDATLFIHKGVEVEN---------DPSLLKKAYDNKEFQIIMDRLALAYEQDPGRWQRVAAKVRGVSEETTTGVHRLYQLEQEGKLLFPAINVNDAV 231          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_DESVH (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.981e-57
Identity = 111/204 (54.41%), Postives = 140/204 (68.63%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH-XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPA----STDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLM    ++G ++P KG K+TGSLHMTIQTA+LI TL  LGA++RW SCNIFSTQDH               WKGETL++YWWCTE AL W  G GPDL+VDDGGDATL IH+GV+ E          DP+    + DN EFQI++  +    + DP ++ ++  ++ GVSEETTTGV RLYQ+++ G LLFPAINVND+V
Sbjct:   37 EMPGLMELIRKYGGTKPLKGLKVTGSLHMTIQTAMLIRTLYELGADIRWASCNIFSTQDHAAAAIAASGMAKVFAWKGETLEDYWWCTEMALTWPDGSGPDLLVDDGGDATLFIHKGVEVEN---------DPSLLKKAYDNKEFQIIMDRLALAYEQDPGRWQRVAAKVRGVSEETTTGVHRLYQLEQEGKLLFPAINVNDAV 231          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_PELPB (Adenosylhomocysteinase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.834e-57
Identity = 115/199 (57.79%), Postives = 132/199 (66.33%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R ++    P KGA+I GSLHMTIQTAVLIETL  LGAEVRW SCNIFSTQDH              WKGETL+EYWWCT + L++  G GP+LIVDDGGDATL+I  G K E   E   K P      N E + +    R+    D +++HK+   + GVSEETTTGV RLYQM E G LLFPAINVNDSV
Sbjct:   31 EMPGLMATRRKYAGQYPLKGARIAGSLHMTIQTAVLIETLVELGAEVRWASCNIFSTQDHAAAAIAKSGVPVFAWKGETLEEYWWCTRQILEFEGGKGPNLIVDDGGDATLMIILGYKIENNPELLEKAP-----ANLEEKALYQQFREVFAEDSQRWHKVAAEMKGVSEETTTGVHRLYQMMEKGELLFPAINVNDSV 224          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_PELCD (Adenosylhomocysteinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.284e-56
Identity = 117/199 (58.79%), Postives = 137/199 (68.84%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R E+  ++P  GA+ITGSLHMTIQTAVLIETL  LGA++RW SCNI+STQDH              +KGETL+EYW  T KAL +    GP LIVDDGGDATLLIH GV+ E  Y +TGK+P+  S DN E  IV  ++   L  D + + +M   L+GVSEETTTGV RLY M  NG LLFPA NVNDSV
Sbjct:   31 EMPGLMAIREEYRGTKPLAGARITGSLHMTIQTAVLIETLAELGADLRWASCNIYSTQDHAAAAIAATGVPVFAYKGETLEEYWEYTFKALAYEE--GPQLIVDDGGDATLLIHRGVERERAYARTGKVPE-ISHDNKELSIVDALLNRQLLVDAEYWQRMATGLLGVSEETTTGVHRLYHMARNGELLFPAFNVNDSV 226          
The following BLAST results are available for this feature:
BLAST of CF832492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_CHLL22.765e-5958.79Adenosylhomocysteinase OS=Chlorobium limicola (str... [more]
SAHH_BACTN1.792e-5858.62Adenosylhomocysteinase OS=Bacteroides thetaiotaomi... [more]
SAHH_STRAZ2.341e-5857.50Adenosylhomocysteinase OS=Streptomyces atroolivace... [more]
SAHH_PLACH5.214e-5853.73Adenosylhomocysteinase OS=Plasmodium chabaudi GN=P... [more]
SAHH_BACFR5.214e-5858.50Adenosylhomocysteinase OS=Bacteroides fragilis GN=... [more]
SAHH_DESVM1.517e-5755.50Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_DESVV1.981e-5754.41Adenosylhomocysteinase OS=Desulfovibrio vulgaris s... [more]
SAHH_DESVH1.981e-5754.41Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_PELPB9.834e-5757.79Adenosylhomocysteinase OS=Pelodictyon phaeoclathra... [more]
SAHH_PELCD1.284e-5658.79Adenosylhomocysteinase OS=Pelobacter carbinolicus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832492 ID=CF832492; Name=CF832492; organism=Citrus sinensis; type=EST; length=599bp
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCCTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
CGCCGTCCTCATCGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGA
GTCAAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGC
CTCCACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATG
GGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTT
GGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCA
AGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTC
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