CF832492

Overview
NameCF832492
Unique NameCF832492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_METMA (Adenosylhomocysteinase OS=Methanosarcina mazei GN=ahcY PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.437e-15
Identity = 61/199 (30.65%), Postives = 86/199 (43.22%), Query Frame = 3
Query:    6 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWK-GETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            MP L   R +F   +P KG K+  +LH+  +TAVL+ETL A GA+V    CN  STQD                K G    EY+   ++ LD      PD+ +DDG D    +H                                         K+  +M  +++G  EETTTGV RL+ M+++G L  P I VND++
Sbjct:   21 MPVLAIIREKFEKEKPLKGLKVGMALHVEAKTAVLVETLAAGGAQVAISGCNPLSTQDDVAAALDTRENINCFAKYGCCTGEYYEAIDRVLDI----EPDITIDDGADLIFKLH-----------------------------------------KERQEMLAKILGGCEETTTGVHRLHAMEKDGALKMPVIAVNDAM 174          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_SULSO (Adenosylhomocysteinase OS=Sulfolobus solfataricus GN=ahcY PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.312e-15
Identity = 59/197 (29.95%), Postives = 81/197 (41.12%), Query Frame = 3
Query:    6 MPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 596
            MP LM  R  F   +P KG  I+  LH+T +TA L++TL   GA V     N  STQD               WKGE   EY+   E  +       P++++DDG D    IHE V +                                          K  + G +EETTTGV RL  M+++G L +P + VN++
Sbjct:   25 MPTLMEIRKRFKAEKPLKGINISAVLHVTKETAALVKTLKIGGANVALAGSNPLSTQDDVAAALVEEGISVFAWKGENETEYYSNIESIVKIHE---PNIVMDDGADLHAYIHEKVSS------------------------------------------KLDIYGGTEETTTGVIRLKAMEKDGVLKYPLVAVNNA 176          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_AQUAE (Adenosylhomocysteinase OS=Aquifex aeolicus GN=ahcY PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.036e-14
Identity = 60/199 (30.15%), Postives = 82/199 (41.21%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH-XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 596
            +MP L   R  F   +P KG KI+  LH+T +TA L+ TL   GAEV   + N  STQD                 +GE  + Y+      ++      PD+++DDG D    +H                                         K+Y  + E+++G  EETTTGV RL  M E G L FP I VND+
Sbjct:   24 DMPVLRQIRERFSKEKPLKGKKISACLHVTTETANLMRTLKEGGAEVYLTASNPLSTQDDVAAALVKYFEIPVFAIRGEDRETYYKHLRAVIE----KEPDVVIDDGADLISTLH-----------------------------------------KEYPGLAEKVLGGMEETTTGVIRLRAMAEQGVLKFPIIAVNDA 177          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_CYAP7 (Adenosylhomocysteinase OS=Cyanothece sp. (strain PCC 7424) GN=ahcY PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.325e-12
Identity = 60/199 (30.15%), Postives = 84/199 (42.21%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH-XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 596
            EMP +   +  F   +PF+G ++    H+T +TA L   L A GA+    + N  STQD                 KGE    Y    + ALD      P+LI+DDGGD T        A  I E+  ++ D                                 ++G +EETTTG+ RL  M ++G L FPA+NVND+
Sbjct:   35 EMPVVKQIKDRFEKEKPFEGIRLIACCHVTTETANLAIALKAGGADAVLIASNPLSTQDDVAACLVADYGIPVFAIKGEDNATYHRHVQIALD----HKPNLIIDDGGDVT--------ATLIQERKDQIAD---------------------------------IIGTTEETTTGIVRLAAMLKDGVLSFPAMNVNDA 188          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_THEEB (Adenosylhomocysteinase OS=Thermosynechococcus elongatus (strain BP-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.649e-12
Identity = 59/199 (29.65%), Postives = 84/199 (42.21%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXX-WKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDS 596
            EMP L   R  F   +PF G ++    H+T +TA L   L A GA+    + N  STQD                 KGE    Y      ALD  P    ++I+DDG D                                 +V T++++       + H++ + ++G +EETTTG+ RL  M  +G L FPAINVND+
Sbjct:   35 EMPVLRQIRDRFEKEKPFAGIRLAACCHVTTETANLAIALKAGGADAVLIASNPLSTQDDVAASLVVNYGIPVFAQKGEDTATYMRHVNIALDHRP----NIIIDDGCD---------------------------------VVATLVKE-------RQHQISD-IIGTTEETTTGIVRLKAMFRDGVLTFPAINVNDA 188          
The following BLAST results are available for this feature:
BLAST of CF832492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_METMA1.437e-1530.65Adenosylhomocysteinase OS=Methanosarcina mazei GN=... [more]
SAHH_SULSO9.312e-1529.95Adenosylhomocysteinase OS=Sulfolobus solfataricus ... [more]
SAHH_AQUAE6.036e-1430.15Adenosylhomocysteinase OS=Aquifex aeolicus GN=ahcY... [more]
SAHH_CYAP74.325e-1230.15Adenosylhomocysteinase OS=Cyanothece sp. (strain P... [more]
SAHH_THEEB5.649e-1229.65Adenosylhomocysteinase OS=Thermosynechococcus elon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832492 ID=CF832492; Name=CF832492; organism=Citrus sinensis; type=EST; length=599bp
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCCTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
CGCCGTCCTCATCGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGA
GTCAAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGC
CTCCACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATG
GGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTT
GGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCA
AGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTC
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