CF832492

Overview
NameCF832492
Unique NameCF832492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length599
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1840 contig Csv1_Contig1840:230..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_CHLP8 (Adenosylhomocysteinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ahcY PE=3 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.284e-56
Identity = 113/199 (56.78%), Postives = 133/199 (66.83%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP+LIVDDGGDATL+IH G K E       K P      NAE + +   +++    D +++HK+   + GVSEETTTGV RLYQM E G LLFPAINVNDSV
Sbjct:   31 EMPGLMATRKKYEGKKPLAGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLDEYWWCTRQILEFEGGLGPNLIVDDGGDATLMIHLGYKIENDPSMLDKTP-----GNAEERALFAQLKEVFAEDNQRWHKVAAGMKGVSEETTTGVHRLYQMMEKGELLFPAINVNDSV 224          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_CHLTE (Adenosylhomocysteinase OS=Chlorobium tepidum GN=ahcY PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56
Identity = 114/199 (57.29%), Postives = 133/199 (66.83%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R ++   +P  GA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP+LIVDDGGDATL+IH G K E       K P      NAE + +L  ++     D +++HK+   + GVSEETTTGV RLYQM E G LLFPAINVNDSV
Sbjct:   31 EMPGLMATRKKYEGKKPLAGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAAAGVPVFAWKGETLDEYWWCTRQILEFEGGLGPNLIVDDGGDATLMIHFGYKIENDPSMLDKTP-----GNAEEKALLQQLKAVFAEDNQRWHKVAAGMKGVSEETTTGVHRLYQMMEKGELLFPAINVNDSV 224          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_PELLD (Adenosylhomocysteinase OS=Pelodictyon luteolum (strain DSM 273) GN=ahcY PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.737e-56
Identity = 112/202 (55.45%), Postives = 136/202 (67.33%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE---EIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R ++   +P KGA++ GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGETL++YWWCT + LD+G G GP+LIVDDGGDATL+I  G K E    + +  G         NAE + +   ++   + D  ++HK+ + + GVSEETTTGV RLYQM E G LLFPAINVNDSV
Sbjct:   31 EMPGLMAIRKKYAGQKPLKGARVAGSLHMTIQTAVLIETLVDLGADVRWASCNIFSTQDHAAAAIAATGVPVFAWKGETLEDYWWCTRQILDFGDGQGPNLIVDDGGDATLMIILGYKIENNPSMLQNAG--------GNAEERALFGQLKAIYEEDSNRWHKVAKEMKGVSEETTTGVHRLYQMMEKGELLFPAINVNDSV 224          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_CHLCH (Adenosylhomocysteinase OS=Chlorobium chlorochromatii (strain CaD3) GN=ahcY PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 4.881e-56
Identity = 114/199 (57.29%), Postives = 133/199 (66.83%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R ++   +P KGA+I GSLHMTIQTAVLIETL  LGA VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP+LIVDDGGDATL+I  G K E   +   K P      NAE + +   +R+    D +++HK+   + GVSEETTTGV RLYQM E G LLFPAINVNDSV
Sbjct:   31 EMPGLMALRKKYAGQKPLKGARIAGSLHMTIQTAVLIETLVDLGANVRWASCNIFSTQDHAAAAIAQAGVPVFAWKGETLDEYWWCTRQILEFDGGLGPNLIVDDGGDATLMIILGHKIENDPKMLDKTP-----GNAEEKALYQQLREVFAEDNQRWHKVAADMKGVSEETTTGVHRLYQMMEKGELLFPAINVNDSV 224          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.087e-55
Identity = 112/209 (53.59%), Postives = 139/209 (66.51%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH                       WKGE+L+EYWWC E+ L W     P ++I+DDGGDAT+L+  G++    YEK G +P     D+AE+++ L ++R   + D  K+ K+ E + GV+EETTTGV RLYQ  E G L FPAINVNDSV
Sbjct:   39 EMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGVPVFAWKGESLEEYWWCAEQMLTWPDSDKPANMILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDSAEWKVFLGLLRSRFETDKGKWTKIAESVKGVTEETTTGVLRLYQFAEAGDLAFPAINVNDSV 243          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_CHLPD (Adenosylhomocysteinase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=ahcY PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.087e-55
Identity = 112/199 (56.28%), Postives = 131/199 (65.83%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R ++   +P KGA+I GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGETL EYWWCT + L++  G GP LIVDDGGDATL+IH G K E       K P      N E + +   +R+  + D +++H +   + GVSEETTTGV RLYQM E   LLFPAINVNDSV
Sbjct:   31 EMPGLMATRKKYAGQKPLKGARIAGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAKAGIPVFAWKGETLDEYWWCTRQILEFEGGKGPHLIVDDGGDATLMIHLGYKIEIDPSLLDKTP-----GNIEEKALFQQLREVYEEDSQRWHNVAAEMKGVSEETTTGVHRLYQMMEKEELLFPAINVNDSV 224          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPT (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain TIE-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.132e-55
Identity = 113/200 (56.50%), Postives = 135/200 (67.50%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH-KMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R E+GP QP KGAKI GSLHMTIQTAVLIETL ALGAEVRW SCNI+STQDH               KGETL++YW  T K  DW  GG P++I+DDGGDAT+ +H+G++AE      G        ++ E +I   +I+  LK  PK Y   + + + GVSEETTTGV RLY M++ G LLFPAINVNDSV
Sbjct:   29 EMPGLMATREEYGPKQPLKGAKIAGSLHMTIQTAVLIETLVALGAEVRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLKDYWDYTAKLFDWSDGGTPNMILDDGGDATMFVHQGLRAE-----NGDTMFLDQHNSEEEEIFFALIKRILKEKPKGYFATLAKNIKGVSEETTTGVHRLYDMEKAGKLLFPAINVNDSV 223          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPA (Adenosylhomocysteinase OS=Rhodopseudomonas palustris GN=ahcY PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.132e-55
Identity = 113/200 (56.50%), Postives = 135/200 (67.50%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYH-KMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R E+GP QP KGAKI GSLHMTIQTAVLIETL ALGAEVRW SCNI+STQDH               KGETL++YW  T K  DW  GG P++I+DDGGDAT+ +H+G++AE      G        ++ E +I   +I+  LK  PK Y   + + + GVSEETTTGV RLY M++ G LLFPAINVNDSV
Sbjct:   29 EMPGLMATREEYGPKQPLKGAKIAGSLHMTIQTAVLIETLVALGAEVRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLKDYWDYTAKLFDWSDGGTPNMILDDGGDATMFVHQGLRAE-----NGDTMFLDQHNSEEEEIFFALIKRILKEKPKGYFATLAKNIKGVSEETTTGVHRLYDMEKAGKLLFPAINVNDSV 223          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 5.396e-55
Identity = 111/209 (53.11%), Postives = 138/209 (66.03%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGP-DLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH                       WKGE+L+EYWWC E+ L W     P ++I+DDGGDAT+L+  G++    YEK G +P     D+AE+++ L ++R   + D  K+ K+ E + GV+EETTTGV RLYQ    G L FPAINVNDSV
Sbjct:   39 EMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGVPVFAWKGESLEEYWWCAEQMLTWPDSDKPANMILDDGGDATMLVLRGMQ----YEKAGVVPPAEEDDSAEWKVFLGLLRSRFETDKGKWTKIAESVKGVTEETTTGVLRLYQFAAAGDLAFPAINVNDSV 243          
BLAST of CF832492 vs. ExPASy Swiss-Prot
Match: SAHH_PROVI (Adenosylhomocysteinase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ahcY PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.570e-54
Identity = 110/202 (54.46%), Postives = 135/202 (66.83%), Query Frame = 3
Query:    3 EMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE---EIYEKTGKLPDPASTDNAEFQIVLTIIRDGLKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSV 599
            EMPGLMA R ++   +P  G++I+GSLHMTIQTAVLIETL  LGA+VRW SCNIFSTQDH              WKGE+L+EYWWCT + LD+G G GP+LIVDDGGDAT++I  G K E    +++K G         NAE + +   ++     D  ++HK+   + GVSEETTTGV RLY M E G LLFPAINVNDSV
Sbjct:   31 EMPGLMAIRNKYKGQKPLAGSRISGSLHMTIQTAVLIETLVELGADVRWASCNIFSTQDHAAAAIAVTGVPVFAWKGESLEEYWWCTRQILDFGNGLGPNLIVDDGGDATMMIILGYKVENNPSMFDKGG--------SNAEEKALFAQLKSIYDEDSTRWHKVAADMKGVSEETTTGVHRLYHMMEKGELLFPAINVNDSV 224          
The following BLAST results are available for this feature:
BLAST of CF832492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_CHLP81.284e-5656.78Adenosylhomocysteinase OS=Chlorobaculum parvum (st... [more]
SAHH_CHLTE1.677e-5657.29Adenosylhomocysteinase OS=Chlorobium tepidum GN=ah... [more]
SAHH_PELLD3.737e-5655.45Adenosylhomocysteinase OS=Pelodictyon luteolum (st... [more]
SAHH_CHLCH4.881e-5657.29Adenosylhomocysteinase OS=Chlorobium chlorochromat... [more]
SAHH_MYCUA1.087e-5553.59Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_CHLPD1.087e-5556.28Adenosylhomocysteinase OS=Chlorobium phaeobacteroi... [more]
SAHH_RHOPT4.132e-5556.50Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHOPA4.132e-5556.50Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_MYCMM5.396e-5553.11Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]
SAHH_PROVI1.570e-5454.46Adenosylhomocysteinase OS=Prosthecochloris vibriof... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832492 ID=CF832492; Name=CF832492; organism=Citrus sinensis; type=EST; length=599bp
TCGAAATGCCGGGGCTCATGGCTTGCCGCGCCGAGTTCGGCCCTTCACAG
CCCTTCAAAGGAGCCAAGATCACCGGTTCACTCCACATGACCATCCAGAC
CGCCGTCCTCATCGAGACCCTCACCGCTCTCGGCGCCGAAGTCCGCTGGT
GCTCCTGCAACATCTTCTCAACCCAAGACCACGCGGCCGCCGCCATCGCA
CGTGACTCCGCCTCCGTCTTTGCCTGGAAGGGTGAGACCCTCCAGGAGTA
CTGGTGGTGCACGGAGAAAGCCCTGGACTGGGGTCCCGGCGGCGGCCCAG
ATCTCATCGTCGATGACGGTGGTGACGCCACGTTGTTGATCCACGAGGGA
GTCAAAGCTGAGGAGATCTACGAGAAGACCGGGAAGTTGCCCGACCCGGC
CTCCACCGACAACGCCGAGTTTCAGATTGTTTTGACTATCATTAGAGATG
GGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTT
GGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCA
AGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTC
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