CF832509

Overview
NameCF832509
Unique NameCF832509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:181..879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.288e-51
Identity = 102/166 (61.45%), Postives = 118/166 (71.08%), Query Frame = -1
Query:  196 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 693
            +V+FD+   G+P GRIVM L    VPKTAENFRALCTGEKG G       YKGS FHR+IP+FM Q           G+SIYG KF DENF+LKHTGPG+L MANAGP+TNGSQFFITT  TSWLD RHVVFG V+ GMDVV K+E+ G Q+G    K+ V D G+
Sbjct:    5 RVFFDMSADGQPVGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSRFHRVIPNFMCQGGDFTNHNGTGGKSIYGTKFEDENFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEGMDVVKKLESLGSQSGKTNKKIAVVDCGQ 163          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.682e-51
Identity = 102/167 (61.08%), Postives = 120/167 (71.86%), Query Frame = -1
Query:  196 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSGE 693
            +VYFD+ I GK  GRI M L+   VPKTA+NFR+LCTGEKGIGKSGKPLHYKGS FHR+I  FM+Q           GESIYG KF DE F +KH  P LLSMANAGP+TNGSQFFITTV T  LDG+HVVFG+VL+G  VV ++E    Q+G  P  + ++ D GE
Sbjct:   12 RVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCGE 178          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.682e-51
Identity = 99/166 (59.64%), Postives = 116/166 (69.88%), Query Frame = -1
Query:  196 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 693
            KV+FD+ + G+ +GR+   LF   VPKTAENFRALCTGEKG G SGKPLHYK S FHRIIP FM Q           GESIYG  F DENF LKH G GLLSMANAGP+TNGSQFFIT V T WLDG H VFG+++ G  V+  +E  G ++G P +K+ + D GE
Sbjct:    8 KVFFDIAVNGQHSGRMTFKLFSDTVPKTAENFRALCTGEKGKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDENFTLKHKGKGLLSMANAGPNTNGSQFFITFVDTPWLDGNHTVFGQIVDGSKVLDLLEQHGSRSGMPSAKIEITDCGE 173          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPIF_RAT (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Rattus norvegicus GN=Ppif PE=1 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 3.748e-51
Identity = 99/165 (60.00%), Postives = 117/165 (70.91%), Query Frame = -1
Query:  196 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 690
            VY DV   G+P GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IP+FM Q           G+SIYG +FPDENF LKH GPG+LSMANAGP+TNGSQFFI T+ T WLDG+HVVFG V  GMDVV K+E+ G ++G    K+V+ D G+
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSKKIVITDCGQ 204          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPIF_MOUSE (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Mus musculus GN=Ppif PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.895e-51
Identity = 99/165 (60.00%), Postives = 116/165 (70.30%), Query Frame = -1
Query:  196 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 690
            VY DV   G+P GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IP+FM Q           G SIYG +FPDENF LKH GPG+LSMANAGP+TNGSQFFI T+ T WLDG+HVVFG V  GMDVV K+E+ G ++G    K+V+ D G+
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGRSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSKKIVITDCGQ 204          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.895e-51
Identity = 102/172 (59.30%), Postives = 123/172 (71.51%), Query Frame = -1
Query:  196 TNKVYFDVEIA---GKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSGE 699
            T+KVYFD+ +    GK AGRIV+GL+G  VP+T ENFRALCTGEKG G       YKGSTFHR+I  FM+Q           G+S+YG  F DENFKL H GPG+LSMANAGP+TNGSQFFI T+ TSWLDGRHVVFG+V+ GM+VV  +E +    G  P+ KVV+AD G+
Sbjct:   89 THKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG-------YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQ 253          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.393e-51
Identity = 102/168 (60.71%), Postives = 119/168 (70.83%), Query Frame = -1
Query:  199 TNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSG 699
            T+K+YFD++   +  GRIV GL+GK VPKTAENF+ L TG+ G G       YKGSTFHR+I  FM+Q           G+SIYG +FPDENFKL+HT PGLLSMANAGPD+NGSQFFITTV TSWLDG+HVVFGKVL GMDVV K+E         P   VV+AD G
Sbjct:   33 TDKIYFDIKQGEESLGRIVFGLYGKTVPKTAENFKQLATGQNGYG-------YKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKVLEGMDVVTKIEKTPTNYRSKPNVDVVIADCG 193          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.393e-51
Identity = 102/163 (62.58%), Postives = 116/163 (71.17%), Query Frame = -1
Query:  199 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSG 687
            +FDV   G+P GRIV  LF   VPKTA NFRALCTGEKG G       Y GSTFHR+IP FMLQ           G+SIYGEKFPDENF LKH  PGLLSMANAGP+TNGSQFFITTV T WLDG+HVVFG+V  GMDVV KVE+ G  +G  ++++V+   G
Sbjct:    5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYG-------YAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCG 160          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.424e-50
Identity = 99/166 (59.64%), Postives = 120/166 (72.29%), Query Frame = -1
Query:  196 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 693
            +VY D++I  KPAGRI M L    VP TAENFR LCT EKG G       +KGS+FHRIIP FM Q           G+SIYG+KF DENF LKHTGPGLLSMAN+GP+TNGSQFF+T   T WLDG+HVVFG+V  G+DV+ ++EA+G ++G PK KV++AD GE
Sbjct:  141 QVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFG-------FKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIIADCGE 299          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.860e-50
Identity = 106/166 (63.86%), Postives = 115/166 (69.28%), Query Frame = -1
Query:  196 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 693
            +VYFD+ I  KP GRIV  LF   VPKTAENFRALCTGEKG GKSGKPL Y+GS FHRII +FM+Q           GESIYGEKF DENF LKH  P LLSMANAGP TNGSQFFITTV T  LDG+HVVFGKVL G  VV  +E     +  P    V+A  GE
Sbjct:    5 RVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLETVSDRPVEDAVIAKCGE 170          
The following BLAST results are available for this feature:
BLAST of CF832509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPIA_BLAGE1.288e-5161.45Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPID_GIBZE1.682e-5161.08Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
CYP6_RHIOR1.682e-5159.64Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
PPIF_RAT3.748e-5160.00Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIF_MOUSE4.895e-5160.00Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
CP20B_ARATH4.895e-5159.30Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPIB2_RHIOR6.393e-5160.71Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
CYPH_SCHPO6.393e-5162.58Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
PPIE_HUMAN1.424e-5059.64Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]
PPID_RHIOR1.860e-5063.86Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832509 ID=CF832509; Name=CF832509; organism=Citrus sinensis; type=EST; length=699bp
TTTTTTTTTTTTTTTCAGAGAAAAGGATCCCCTTAAAATGAAGCACCATC
TTGGCAAACAACCTAGGACATTTTAAAATGTCTATTACATGATAAATAGG
CAAATTATGAGTATCTTCATGAAGGTTGAAAAGACGAGAGGACTAAAAAG
GTGTATAGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCAC
CGCTGTCTGCAACGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCCT
TCAGCTTCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAAA
TACAACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAGA
ATTGTGAACCATTGGTGTCTGGACCAGCATTTGCCATTGACAAAAGCCCT
GGGCCAGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCATA
AATTGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGAA
GCATAAAGCTGGGAATAATCCTATGGAACGTACTTCCCTTGTAGTGGAGT
GGCTTCCCGCTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGAA
ATTTTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATAC
GTCCGGCAGGTTTTCCAGCAATCTCAACGTCAAAGTAAACTTTGTTTGT
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