CF832525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.134e-49 Identity = 95/194 (48.97%), Postives = 136/194 (70.10%), Query Frame = -1 Query: 257 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 838 A FLK+ ++ +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LDPAL+R GRLDRKIE P P E++R IL+IH+ + H ++++E + + + FNGA L+ VC EAGM A+R + V HEDF + + ++ +AKK S +Y Sbjct: 231 ATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV-QAKKKASLNYY 423
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS6A_ORYSJ (26S protease regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica GN=TBP1 PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 2.787e-49 Identity = 95/196 (48.47%), Postives = 137/196 (69.90%), Query Frame = -1 Query: 251 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHYNA 838 A FLK+ ++ +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LDPAL+R GRLDRKIE P P+E++R IL+IH+ + + ++++E + + + FNGA L+ VC EAGM A+R + V HEDF + + ++ KK SS +Y A Sbjct: 236 ATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQVQAKKK--SSLNYYA 429
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 4.754e-49 Identity = 94/194 (48.45%), Postives = 136/194 (70.10%), Query Frame = -1 Query: 257 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 838 A FLK+ ++ +IG+ A+L+R+ F A++ PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LDPAL+R GRLDRKIE P P E++R IL+IH+ + + ++++E + + + FNGA L+ VC EAGM A+R + V HEDF + + ++ +AKK S +Y Sbjct: 230 ATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVTHEDFNEGIIQV-QAKKKASLNYY 422
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.209e-49 Identity = 95/187 (50.80%), Postives = 132/187 (70.59%), Query Frame = -1 Query: 278 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 838 A FL+VV S +I KY+G+ +L+RE+F A D P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+I+ATNR + LDPALLRPGR+DRKIE PLP+ ++R I +IH + + +++ E V + F+GAD++ +CTEAG+ A+R R V H DF KA K+ KK Sbjct: 248 ATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEKVMFKKK 434
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 6.209e-49 Identity = 95/187 (50.80%), Postives = 132/187 (70.59%), Query Frame = -1 Query: 278 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 838 A FL+VV S +I KY+G+ +L+RE+F A D P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+I+ATNR + LDPALLRPGR+DRKIE PLP+ ++R I +IH + + +++ E V + F+GAD++ +CTEAG+ A+R R V H DF KA K+ KK Sbjct: 248 ATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEKVMFKKK 434
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 8.109e-49 Identity = 96/180 (53.33%), Postives = 131/180 (72.78%), Query Frame = -1 Query: 293 FLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 832 F++V S ++ K+IGE AR++RE+F AR+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD ALLRPGR+DRKIE P PNE++R++ILKIH+ + I+ + +L G +GA+++ VCTEAGM A+R R +V EDF AV K+ Sbjct: 206 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSR-LEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV 384
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.109e-49 Identity = 89/178 (50.00%), Postives = 130/178 (73.03%), Query Frame = -1 Query: 305 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKA 838 A FL+VV S +I KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +CTEAG+ A+R R V +EDF K+ Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS 422
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.109e-49 Identity = 89/178 (50.00%), Postives = 130/178 (73.03%), Query Frame = -1 Query: 305 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKA 838 A FL+VV S +I KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +CTEAG+ A+R R V +EDF K+ Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS 422
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.109e-49 Identity = 89/178 (50.00%), Postives = 130/178 (73.03%), Query Frame = -1 Query: 305 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKA 838 A FL+VV S +I KY+G+ +L+RE+F A +H P I+F+DEIDAIG +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E+++ I +IH + + ++ + ++ + +GAD++ +CTEAG+ A+R R V +EDF K+ Sbjct: 245 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS 422
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 8.109e-49 Identity = 90/187 (48.13%), Postives = 132/187 (70.59%), Query Frame = -1 Query: 278 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 838 A FL+VV S +I KY+G+ +L+RE+F A +H P I+F+DEIDA+G +R+ + +REIQRT++ELLNQLDGFD G VK+IMATNR + LDPAL+RPGR+DRKIE PLP+E+++ I IH + + +++ ++ + +GAD++ +CTEAG+ A+R R V +EDF K+ + KK Sbjct: 244 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKESVLYRKK 430 The following BLAST results are available for this feature:
BLAST of CF832525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832525 ID=CF832525; Name=CF832525; organism=Citrus sinensis; type=EST; length=838bpback to top |