CF832525

Overview
NameCF832525
Unique NameCF832525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10082 contig Csv1_Contig10082:640..1477. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.529e-47
Identity = 98/181 (54.14%), Postives = 123/181 (67.96%), Query Frame = -1
Query:  296 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRK 838
            A FL  V S ++ KYIGE ARL+RE+F  A++  P I+F+DEIDAIG  R    TS DRE+QRTLM+LL  +DGF+  G VK+I ATNR D+LD ALLRPGR DR IEIPLP+ + R  ILK+H   +    ++D   V +L EG NGA+L  +C EAGM AIR E   V  EDF+ A+ K
Sbjct:  213 AIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDEIDAIGASRTEAMTSGDREVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYSILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMFAIRKEHPQVDQEDFLTALNK 393          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.997e-47
Identity = 96/183 (52.46%), Postives = 129/183 (70.49%), Query Frame = -1
Query:  290 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLN 838
            A F+ VV+S    K++GE AR++RE+F  A+   P IIF+DEIDAIG +R   GTS +REIQRTLM+LL +LDGF+ L  VK+I ATNR D+LDPALLRPGR DR IE+PLP+ + R EI  I+   +     I+ E + +L+EGF+GAD++NVC EA   AIR  R+ V  +D + A+ K+N
Sbjct:  194 AVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVNAITKIN 376          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.997e-47
Identity = 88/187 (47.06%), Postives = 132/187 (70.59%), Query Frame = -1
Query:  278 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 838
            A FL++V S +I KY+G+  +++RE+F  A ++ P I+F+DEIDA+G +R+   +  +REIQRT++ELLNQLDGFD  G VK++MATNR + LDPAL+RPGR+DRKIE PLP+E+++  I +IH + +    E++ E  +   +  +GAD++ +CTEAG+ A+R  R  V  EDF K+   +   KK
Sbjct:  248 ATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKK 434          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.608e-47
Identity = 96/183 (52.46%), Postives = 129/183 (70.49%), Query Frame = -1
Query:  290 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLN 838
            A F+ VV+S    K++GE AR++RE+F  A+   P IIF+DEIDAIG +R   GTS +REIQRTLM+LL +LDGF+ L  VK+I ATNR D+LDPALLRPGR DR IE+PLP+ + R EI  I+   +     I+ E + +L+EGF+GAD++NVC EA   AIR  R+ V  +D + A+ K+N
Sbjct:  194 AVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKIN 376          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.608e-47
Identity = 96/183 (52.46%), Postives = 129/183 (70.49%), Query Frame = -1
Query:  290 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLN 838
            A F+ VV+S    K++GE AR++RE+F  A+   P IIF+DEIDAIG +R   GTS +REIQRTLM+LL +LDGF+ L  VK+I ATNR D+LDPALLRPGR DR IE+PLP+ + R EI  I+   +     I+ E + +L+EGF+GAD++NVC EA   AIR  R+ V  +D + A+ K+N
Sbjct:  194 AVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKIN 376          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.608e-47
Identity = 96/183 (52.46%), Postives = 129/183 (70.49%), Query Frame = -1
Query:  290 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLN 838
            A F+ VV+S    K++GE AR++RE+F  A+   P IIF+DEIDAIG +R   GTS +REIQRTLM+LL +LDGF+ L  VK+I ATNR D+LDPALLRPGR DR IE+PLP+ + R EI  I+   +     I+ E + +L+EGF+GAD++NVC EA   AIR  R+ V  +D + A+ K+N
Sbjct:  194 AVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKIN 376          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.608e-47
Identity = 96/183 (52.46%), Postives = 129/183 (70.49%), Query Frame = -1
Query:  290 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLN 838
            A F+ VV+S    K++GE AR++RE+F  A+   P IIF+DEIDAIG +R   GTS +REIQRTLM+LL +LDGF+ L  VK+I ATNR D+LDPALLRPGR DR IE+PLP+ + R EI  I+   +     I+ E + +L+EGF+GAD++NVC EA   AIR  R+ V  +D + A+ K+N
Sbjct:  194 AVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKIN 376          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.608e-47
Identity = 96/183 (52.46%), Postives = 129/183 (70.49%), Query Frame = -1
Query:  290 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLN 838
            A F+ VV+S    K++GE AR++RE+F  A+   P IIF+DEIDAIG +R   GTS +REIQRTLM+LL +LDGF+ L  VK+I ATNR D+LDPALLRPGR DR IE+PLP+ + R EI  I+   +     I+ E + +L+EGF+GAD++NVC EA   AIR  R+ V  +D + A+ K+N
Sbjct:  194 AVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKIN 376          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4)

HSP 1 Score: 188.734 bits (478), Expect = 3.407e-47
Identity = 94/180 (52.22%), Postives = 126/180 (70.00%), Query Frame = -1
Query:  293 FLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 832
            F++V  + ++ KYIGE +R++RE+F  AR+H P IIFMDEID+IG  R       D E+QRT++ELLNQLDGF+    +K+IMATNR D+LDPALLRPGR+DRKIE P P+  +R EIL+IH+  +     I+   V +   G +GAD++ VCTEAGM A+R  R +V  EDF  AV K+
Sbjct:  210 FIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKV 389          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.407e-47
Identity = 97/194 (50.00%), Postives = 129/194 (66.49%), Query Frame = -1
Query:  257 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 838
            A F++VV S  + KY+GE  R++R++F  A+++ P IIF+DEIDAI  +RF   T ADRE+QR L+ELLNQ+DGFDQ   VK+IMATNR D LDPALLRPGRLDRKIE PLP+ + +  I     A +    E+D E  V   +  +GAD+  +C EAGM+A+R  R  V+ +DF K  +  N  KK ES   +
Sbjct:  222 AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDFEKGYK--NNIKKDESEYEF 413          
The following BLAST results are available for this feature:
BLAST of CF832525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
PSMR_METHJ1.529e-4754.14Proteasome-activating nucleotidase OS=Methanospiri... [more]
PSMR_SULIN1.997e-4752.46Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PRS4_CAEEL1.997e-4747.06Probable 26S protease regulatory subunit 4 OS=Caen... [more]
PSMR_SULIY2.608e-4752.46Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIM2.608e-4752.46Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIL2.608e-4752.46Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIK2.608e-4752.46Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIA2.608e-4752.46Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PRS8_YEAST3.407e-4752.2226S protease regulatory subunit 8 homolog OS=Sacch... [more]
PRS6B_MANSE3.407e-4750.0026S protease regulatory subunit 6B OS=Manduca sext... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02A01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832525 ID=CF832525; Name=CF832525; organism=Citrus sinensis; type=EST; length=838bp
TTTTTTTTTTTTTTTTTGAGAATCGGTGGAAATCACTGAAACCATCAATA
CATTAAAGATGTGCAACAATTTCTGACGTAAATGATTGTTATAATATATA
GAGCATTCCATCGCTCAAAGAACCACTAACTTCACAAATTAAAGCAAGAT
GTTTTAACAAAAATATGAAAACAATTACATCTGAAAAATAACCGCACTGC
CTCAAGATCCTTGGCTCTTTTCCTAAATGTTTTTACTCTTTTCCAAAATC
AGCATTGTAGTGAGCACTTGATTCAAGTTTCTTTGCCTCGTTCAGTTTCC
GGACAGCCTTCATAAAATCTTCGTGGATGACATAATCACGTTCAGCACGG
ATTGCCGACATTCCAGCCTCGGTGCAAACATTTCGGAGATCAGCCCCATT
AAAGCCCTCTGCAAGCTTCACAACAGCCTCATAATCAATCTCACCATGCT
TAGCAATGCCAGCAGCATGAATTTTAAGAATTTCCATTCTTGACTGCTCA
TTTGGCAATGGAATCTCAATTTTCCTATCCAGTCGCCCTGGACGAAGAAG
TGCAGGGTCAAGGACATCAGGTCTGTTAGTGGCCATTATCATTTTAACCT
TCCCAAGCTGATCAAATCCATCAAGCTGATTAAGTAACTCCATCAGTGTC
CTTTGAATTTCACGATCTGCACTGGTTCCTTCACTAAAACGGCGTCCACC
GATGGCATCAATTTCATCCATAAAAATGATGCAGGGTTGATGATCACGTG
CATATCCAAACATCTCTCTTATCAACCTTGCACTTTCCCCAATGTACTTA
TCAATAATGGCACTTGAAACCACCTTCAGAAAATTTGC
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