CF832526

Overview
NameCF832526
Unique NameCF832526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.716e-47
Identity = 92/209 (44.02%), Postives = 138/209 (66.03%), Query Frame = 2
Query:   80 EYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            +Y K    ++ +E   + ++      ++E  +   +++ L+S   ++G V   L++ R++VK+S+GP++VV     +++E+L  G RV L+  TL I+  LP   DP+VY    E+   VSY  +GGL  QI E+RE++ELPL+ PELF  VGI+PPKGVLLYGPPGTGKTLLA+A+A+   A F++VV S  + KYIGE ARL+RE+F
Sbjct:   19 DYYKLRELYRRLEDEKKFIESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVF 227          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.273e-46
Identity = 92/200 (46.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:  107 KEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            +++E +VR ++ +    ++E ++   ++  L+      G V+  LD++R IV+  +GPR+VV     +DK KL  GTRV LD  T+ I+  LP   DP V      +  NV+Y+ +GGL  Q++ELRE+IELPL +PELF  VGI PPKGVLLYGPPG GKTL+A+AIA  ++A F++VV S ++ KYIGE ARL+ E+F
Sbjct:   24 RQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGSVIEVLDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELF 223          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.705e-46
Identity = 92/202 (45.54%), Postives = 133/202 (65.84%), Query Frame = 2
Query:  101 QHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            Q +++ES  R V+      ++E  K + +++ L+S   +IG V   +DN R+IV++S+GPR++V     +D + L  G R  L+  +L I+  LP   D  +Y M   +    +Y  +GGL  QI E+RE++ELPL  P+LF +VGI PPKGVLLYGPPGTGKTLLARA+A   +A+FL+VV S ++ KYIGE ARL+RE+F
Sbjct:   38 QFRQMESEKRYVETQKIRYERELRKLKSEIEQLRSPPLVIGTVTDVIDNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELF 239          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.078e-45
Identity = 89/200 (44.50%), Postives = 133/200 (66.50%), Query Frame = 2
Query:  107 KEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            +++E +VR ++ +    ++E ++   ++  L+      G V+  LD +R IV+  +GPR+VV     +D++KL  GTRV LD  T+ ++  LP   DP V      +  NV+Y+ +GGL  Q++ELRE+IELPL +PELF  VGI PPKGVLLYGPPG GKTL+A+A+A  ++A F++VV S ++ KYIGE ARL+ E+F
Sbjct:   27 RQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDEDRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELF 226          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.402e-45
Identity = 88/200 (44.00%), Postives = 138/200 (69.00%), Query Frame = 2
Query:  107 KEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            +++E +VR+++ +    ++E ++   ++  L+      G V+  LD+ER IV+  +GPR+VV     ++++KL  G RV LD  T+ I+  LP E DP V      +   V+Y+ +GGL  Q++ELRE+IELPL +PELF +VGI+PPKGVLLYGPPG GKTL+A+A+A++++A F++VV S ++ K+IGE ARL+ E+F
Sbjct:   25 RQLELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGNVIEVLDDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELF 224          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.096e-45
Identity = 84/202 (41.58%), Postives = 136/202 (67.33%), Query Frame = 2
Query:  101 QHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            ++++IE   +SV+      ++E  K   +L  L++   I+G +L  + N ++I+K+S+GP++VV     ++ +++  G +V L+  +L ++  LP   DP V  M   D   + Y ++GGL  QI EL+E++ELPL+ PELF +VGI+PPKGVLLYGPPGTGKTLLA+A+A+   A F++++ S ++ KYIGE AR++RE+F
Sbjct:   44 EYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELF 245          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.350e-45
Identity = 88/200 (44.00%), Postives = 133/200 (66.50%), Query Frame = 2
Query:  107 KEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            +++E +VR ++ +    ++E ++   ++  L+      G V+  LD++R IV+  +GPR+VV     ++++KL  G RV LD  T+ I+  LP   DP V      +  NV+Y+ +GGL  Q++ELRE+IELPL +PELF  VGI PPKGVLLYGPPG GKTL+A+A+A  ++A F++VV S ++ KYIGE ARL+ E+F
Sbjct:   27 RQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELF 226          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.350e-45
Identity = 92/224 (41.07%), Postives = 141/224 (62.95%), Query Frame = 2
Query:   35 MSEGEDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            M + E+   +RN M + RK       +E     ++       +E      +++  ++   +I  V   LD+ R+ VK+++GP +V+     +D+++L  G RV L+  T +I+  LP E DPVV  M  E+  +VSY  +GGL +Q+RE++E++ELPL  PELF ++GI+PPKGVLLYGPPGTGKTLLA+A+A   +A F+K+V+S  + KYIGE ARL+R +F
Sbjct:   21 MLKEENSKTKRNLMWKIRK-------LEKDKLLIENERTRLDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVF 237          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.988e-45
Identity = 86/200 (43.00%), Postives = 137/200 (68.50%), Query Frame = 2
Query:  107 KEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            +++E +VR+++ +    ++E ++   ++  L+      G V+  LD++R IV+  +GPR+VV     ++++KL  G+RV LD  T+ I+  LP E DP V      +   V+Y  +GGL  Q+ ELRE++ELPL +PELF +VGI+PPKGVLLYGPPG GKTL+A+A+A++++A F++VV S ++ K+IGE ARL+ E+F
Sbjct:   25 RQLELQVRTLEADKERLERELSRLRTEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELF 224          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2)

HSP 1 Score: 179.874 bits (455), Expect = 1.192e-44
Identity = 91/226 (40.27%), Postives = 145/226 (64.16%), Query Frame = 2
Query:   35 MSEGEDPVRRRNAMTEYRKKLLQHK--EIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            + E  + V+ R    E R   L+ +  +IES  R ++      ++E  K + +L  +++   IIG V+  + N+R+IV++S+GP+++V     +D++KL  G +V L+  TL I   +P   +P V  M   +   V Y  +GGL +QI+EL+E++ELPL+ PE F R+GI+PPKGVLLYG PGTGKTLLA+A+A   +A F++VV S ++ KYIG+ ++L+RE+F
Sbjct:   20 LGESTESVQDRVRQLESRNSFLEEQCSQIESEKRYLENQKIKYEREIRKLQSELDRMKTSPLIIGTVIDVIKNDRIIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESIEVDYDQIGGLDEQIQELQEAVELPLIEPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIF 245          
The following BLAST results are available for this feature:
BLAST of CF832526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 354
Match NameE-valueIdentityDescription
PSMR_ARCFU5.716e-4744.02Proteasome-activating nucleotidase OS=Archaeoglobu... [more]
PSMR_PYRFU1.273e-4646.00Proteasome-activating nucleotidase OS=Pyrococcus f... [more]
PSMR_METMJ3.705e-4645.54Proteasome-activating nucleotidase OS=Methanoculle... [more]
PSMR_PYRHO1.078e-4544.50Proteasome-activating nucleotidase OS=Pyrococcus h... [more]
PSMR_PYRKO2.402e-4544.00Proteasome-activating nucleotidase OS=Pyrococcus k... [more]
PSMR_UNCMA4.096e-4541.58Proteasome-activating nucleotidase OS=Uncultured m... [more]
PSMR_PYRAB5.350e-4544.00Proteasome-activating nucleotidase OS=Pyrococcus a... [more]
PSMR_METTH5.350e-4541.07Proteasome-activating nucleotidase OS=Methanobacte... [more]
PSMR_THEGJ6.988e-4543.00Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_METAC1.192e-4440.27Proteasome-activating nucleotidase OS=Methanosarci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02A01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832526 ID=CF832526; Name=CF832526; organism=Citrus sinensis; type=EST; length=712bp
TTGATTTGCTCCCTTAATATCTCCGACTGCAACGATGAGCGAAGGAGAAG
ACCCCGTTAGACGCCGTAATGCCATGACGGAGTACCGTAAGAAGCTACTC
CAGCACAAAGAAATCGAATCTAGAGTTCGATCTGTTAAGGAGAATTTGAG
AGCTGCAAAGAAGGAGTTCAACAAAACAGAAGATGATTTGAAGTCTCTTC
AAAGTGTTGGGCAGATCATTGGAGAAGTTCTCAGACCTCTTGACAATGAA
CGCTTGATTGTTAAAGCTAGCAGCGGGCCCCGTTATGTGGTTGGATGCCG
CAGCAAAGTGGATAAAGAGAAGTTGACTTCGGGAACAAGAGTTGTTCTTG
ATATGACAACGCTCACAATCATGCGAGCTCTTCCTCGTGAAGTTGATCCG
GTTGTATATAACATGTTGCATGAAGATCCGGGTAATGTTAGCTATTCGGC
TGTGGGTGGTTTATCTGATCAGATCAGAGAATTAAGGGAATCTATTGAGC
TACCTTTGATGAATCCTGAGCTTTTCCTTAGAGTTGGAATTAAACCTCCC
AAGGGCGTTCTTCTTTATGGGCCTCCTGGAACTGGCAAGACATTATTAGC
ACGAGCAATTGCCAGTAACATAGATGCAAATTTTCTGAAGGTGGTTTCAA
GTGCCATTATTGATAAGTACATTGGGGAAAGTGCAAGGTTGATAAGAGAG
ATGTTTGGATAT
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