CF832526

Overview
NameCF832526
Unique NameCF832526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10082 contig Csv1_Contig10082:15..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.557e-44
Identity = 91/212 (42.92%), Postives = 137/212 (64.62%), Query Frame = 2
Query:   80 EYRKKLLQHKEIE---SRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            E R++    KE+E        ++E LR  +    K   DL+ ++    I+G V   LD+ R+IVK+S+GP++V      VD+ +L  G  V L+  ++ ++  LP E D  V  M  ++  +VSY  +GGL +QIRE+RE +E PL  PELF +VG++PPKGVLLYGPPGTGKTLLA+A+A++ DA F+++ +  ++ K+IGE ARL+RE+F
Sbjct:   54 EARRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELF 265          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.033e-44
Identity = 90/210 (42.86%), Postives = 140/210 (66.67%), Query Frame = 2
Query:   77 TEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            TE R++L   ++IE+  R ++      ++E  K + +++ ++S   +IG V   +D  R+IV++S+GPR++VG    ++ E++  G R  L+  +L I+  LP   D  +Y M   +  +  Y  +GGL  QI E+RE++ELPL  PE+F ++GI+PPKGVLL+GPPGTGKTLLARA+A   +A+FL+VV S ++ KYIGE ARL+RE+F
Sbjct:   33 TELREQL---RQIEADKRYLETQKVRYEREVRKFKGEIEQMKSPPLVIGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELF 239          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.033e-44
Identity = 91/226 (40.27%), Postives = 145/226 (64.16%), Query Frame = 2
Query:   35 MSEGEDPVRRRNAMTEYRKKLLQHK--EIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            + E  + V+ R    E R   L+ +  +IES  R ++      ++E  K + +L  +++   IIG V+  + N+R+IV++S+GP+++V     +D++KL  G +V L+  TL I   +P   +P V  M   +   V Y  +GGL +QI+EL+E++ELPL +PE F R+GI+PPKGVLLYG PGTGKTLLA+A+A   +A F++VV S ++ KYIG+ ++L+RE+F
Sbjct:   20 LGETTESVQDRVRQLESRNSFLEEQCSQIESEKRYLENQKIKYEREIRKLQSELDRMKTSPLIIGTVIDVIKNDRIIVRSSNGPQFLVNVSQYIDEKKLLPGAKVALNQHTLAIAEVIPSTEEPFVAAMEVIESVEVDYDQIGGLDEQIQELQEAVELPLTSPERFARIGIEPPKGVLLYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIF 245          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.655e-44
Identity = 90/208 (43.27%), Postives = 138/208 (66.35%), Query Frame = 2
Query:   83 YRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            Y KK +  +++E +VR+++ +    ++E ++   ++  L+      G ++  LD +R IV+  +GPR+VV     +++E L  G RV LD  T+ I+  LP E DP V      +   VSY+ +GGL  Q++ELRE+IELPL +PELF +VGI+PPKGVLLYGPPG GKTL+A+A+A  ++A F++VV S ++ K+IGE ARL+ E+F
Sbjct:   20 YLKKRI--RQLELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGTLIELLDEDRAIVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKFIGEGARLVHELF 225          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.468e-44
Identity = 87/198 (43.94%), Postives = 135/198 (68.18%), Query Frame = 2
Query:  113 IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            +E +++S++  +   +KE N  + +++ + S   I   VL  L + R++V++SSGP  VV   S +D++ +  G  V L+    TI+  LP++ DP+V  M   +  NV+YS +GGL +QIRELRE +ELPL NPE+F  +G++PPKGVLLYGPPGTGKT+LA+A+A+  +A F+ VV+S    K++GE AR++RE+F
Sbjct:   23 LEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNIASHIDQKLIKPGISVALNQRGSTILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELF 220          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.529e-44
Identity = 101/261 (38.70%), Postives = 150/261 (57.47%), Query Frame = 2
Query:   14 LISPTATMSEGEDPVRRRNAMTEYRKKLLQHKE----------------IESRVRSVKENLRAAK--------------KEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            ++  TA     E+  R   ++TE  +  LQ  E                +ESR   ++E +R A+              +E  K + + + L+S   IIG V+  +D  R+IV++S+GPR++V     V+ + +  G R  L+  +L I+  LP   D  VY M   D     Y+ +GGL +QI E+RE++ELPL  PELF ++GI+PPKGVLLYGPPGTGKTLLA+A+A   +A+F++VV S ++ KYIGE ARL+RE+F
Sbjct:    4 ILRDTADPQTPEELCRLYRSLTEQLRDQLQRIETDKQDLESQMLERISSLESRNLELREQIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELF 264          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.318e-43
Identity = 91/224 (40.62%), Postives = 144/224 (64.29%), Query Frame = 2
Query:   35 MSEGEDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            MS   D +R  ++  E +   L    +E +++S++  +   +KE N  + +++ + S   I   VL  L + R++V++SSGP  VV   S +D++ +  G  V L+    TI+  LP++ DP+V  M   +  NV+YS +GGL +QI+ELRE +ELPL  PE+F  +G++PPKGVLLYGPPGTGKT+LA+A+A+  +A F+ VV+S    K++GE AR++RE+F
Sbjct:    1 MSGDFDTIRDASSSDEVQLVRL----LEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELF 220          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.318e-43
Identity = 91/224 (40.62%), Postives = 144/224 (64.29%), Query Frame = 2
Query:   35 MSEGEDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            MS   D +R  ++  E +   L    +E +++S++  +   +KE N  + +++ + S   I   VL  L + R++V++SSGP  VV   S +D++ +  G  V L+    TI+  LP++ DP+V  M   +  NV+YS +GGL +QI+ELRE +ELPL  PE+F  +G++PPKGVLLYGPPGTGKT+LA+A+A+  +A F+ VV+S    K++GE AR++RE+F
Sbjct:    1 MSGDFDTIRDASSSDEVQLVRL----LEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELF 220          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.318e-43
Identity = 91/224 (40.62%), Postives = 144/224 (64.29%), Query Frame = 2
Query:   35 MSEGEDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            MS   D +R  ++  E +   L    +E +++S++  +   +KE N  + +++ + S   I   VL  L + R++V++SSGP  VV   S +D++ +  G  V L+    TI+  LP++ DP+V  M   +  NV+YS +GGL +QI+ELRE +ELPL  PE+F  +G++PPKGVLLYGPPGTGKT+LA+A+A+  +A F+ VV+S    K++GE AR++RE+F
Sbjct:    1 MSGDFDTIRDASSSDEVQLVRL----LEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELF 220          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.318e-43
Identity = 91/224 (40.62%), Postives = 144/224 (64.29%), Query Frame = 2
Query:   35 MSEGEDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            MS   D +R  ++  E +   L    +E +++S++  +   +KE N  + +++ + S   I   VL  L + R++V++SSGP  VV   S +D++ +  G  V L+    TI+  LP++ DP+V  M   +  NV+YS +GGL +QI+ELRE +ELPL  PE+F  +G++PPKGVLLYGPPGTGKT+LA+A+A+  +A F+ VV+S    K++GE AR++RE+F
Sbjct:    1 MSGDFDTIRDASSSDEVQLVRL----LEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELF 220          
The following BLAST results are available for this feature:
BLAST of CF832526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 354
Match NameE-valueIdentityDescription
PSMR_METKA1.557e-4442.92Proteasome-activating nucleotidase OS=Methanopyrus... [more]
PSMR_METPE2.033e-4442.86Proteasome-activating nucleotidase OS=Methanosphae... [more]
PSMR_METMA2.033e-4440.27Proteasome-activating nucleotidase OS=Methanosarci... [more]
PSMR_THEON2.655e-4443.27Proteasome-activating nucleotidase OS=Thermococcus... [more]
PSMR_SULSO3.468e-4443.94Proteasome-activating nucleotidase OS=Sulfolobus s... [more]
PSMR_METB64.529e-4438.70Proteasome-activating nucleotidase OS=Methanoregul... [more]
PSMR_SULIY1.318e-4340.63Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIN1.318e-4340.63Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIM1.318e-4340.63Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIL1.318e-4340.63Proteasome-activating nucleotidase OS=Sulfolobus i... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02A01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832526 ID=CF832526; Name=CF832526; organism=Citrus sinensis; type=EST; length=712bp
TTGATTTGCTCCCTTAATATCTCCGACTGCAACGATGAGCGAAGGAGAAG
ACCCCGTTAGACGCCGTAATGCCATGACGGAGTACCGTAAGAAGCTACTC
CAGCACAAAGAAATCGAATCTAGAGTTCGATCTGTTAAGGAGAATTTGAG
AGCTGCAAAGAAGGAGTTCAACAAAACAGAAGATGATTTGAAGTCTCTTC
AAAGTGTTGGGCAGATCATTGGAGAAGTTCTCAGACCTCTTGACAATGAA
CGCTTGATTGTTAAAGCTAGCAGCGGGCCCCGTTATGTGGTTGGATGCCG
CAGCAAAGTGGATAAAGAGAAGTTGACTTCGGGAACAAGAGTTGTTCTTG
ATATGACAACGCTCACAATCATGCGAGCTCTTCCTCGTGAAGTTGATCCG
GTTGTATATAACATGTTGCATGAAGATCCGGGTAATGTTAGCTATTCGGC
TGTGGGTGGTTTATCTGATCAGATCAGAGAATTAAGGGAATCTATTGAGC
TACCTTTGATGAATCCTGAGCTTTTCCTTAGAGTTGGAATTAAACCTCCC
AAGGGCGTTCTTCTTTATGGGCCTCCTGGAACTGGCAAGACATTATTAGC
ACGAGCAATTGCCAGTAACATAGATGCAAATTTTCTGAAGGTGGTTTCAA
GTGCCATTATTGATAAGTACATTGGGGAAAGTGCAAGGTTGATAAGAGAG
ATGTTTGGATAT
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