CF832526

Overview
NameCF832526
Unique NameCF832526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10082 contig Csv1_Contig10082:15..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.318e-43
Identity = 91/224 (40.62%), Postives = 144/224 (64.29%), Query Frame = 2
Query:   35 MSEGEDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            MS   D +R  ++  E +   L    +E +++S++  +   +KE N  + +++ + S   I   VL  L + R++V++SSGP  VV   S +D++ +  G  V L+    TI+  LP++ DP+V  M   +  NV+YS +GGL +QI+ELRE +ELPL  PE+F  +G++PPKGVLLYGPPGTGKT+LA+A+A+  +A F+ VV+S    K++GE AR++RE+F
Sbjct:    1 MSGDFDTIRDASSSDEVQLVRL----LEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELF 220          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.318e-43
Identity = 91/224 (40.62%), Postives = 144/224 (64.29%), Query Frame = 2
Query:   35 MSEGEDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            MS   D +R  ++  E +   L    +E +++S++  +   +KE N  + +++ + S   I   VL  L + R++V++SSGP  VV   S +D++ +  G  V L+    TI+  LP++ DP+V  M   +  NV+YS +GGL +QI+ELRE +ELPL  PE+F  +G++PPKGVLLYGPPGTGKT+LA+A+A+  +A F+ VV+S    K++GE AR++RE+F
Sbjct:    1 MSGDFDTIRDASSSDEVQLVRL----LEEKIKSLQIEIENLRKELNYYKAEMEKMLSPPLIEAVVLDVLPDGRVLVRSSSGPNLVVNVASHIDQKLIKPGVSVALNQRGSTILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELF 220          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.542e-43
Identity = 94/227 (41.41%), Postives = 148/227 (65.20%), Query Frame = 2
Query:   50 DPVRRRNAMTEYRKKLLQHKEIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            D  + +  + E+++K  Q  E+ES+V  +        +EN++  KKE    + +L  L+    I+G +L  ++  + +VK+S+GP ++V     VD E +  G RV L+  TL I+  LP+E D     M  E+  ++S+  +GGL++QIR+++E +ELPL NPELF +VGI PPKGVLLYGPPGTGKTLLA+A+A   +A+F++VV S ++ K+IGE A+L+R++F
Sbjct:   10 DIEKNKMDLKEFKEKT-QIAELESKVLRLELKNKDINRENVQI-KKENEILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVF 234          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.542e-43
Identity = 94/227 (41.41%), Postives = 148/227 (65.20%), Query Frame = 2
Query:   50 DPVRRRNAMTEYRKKLLQHKEIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            D  + +  + E+++K  Q  E+ES+V  +        +EN++  KKE    + +L  L+    I+G +L  ++  + +VK+S+GP ++V     VD E +  G RV L+  TL I+  LP+E D     M  E+  ++S+  +GGL++QIR+++E +ELPL NPELF +VGI PPKGVLLYGPPGTGKTLLA+A+A   +A+F++VV S ++ K+IGE A+L+R++F
Sbjct:   10 DIEKNKMDLKEFKEKT-QIAELESKVLRLELKNKDVTRENVQI-KKENEILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVF 234          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.542e-43
Identity = 94/227 (41.41%), Postives = 148/227 (65.20%), Query Frame = 2
Query:   50 DPVRRRNAMTEYRKKLLQHKEIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            D  + +  + E+++K  Q  E+ES+V  +        +EN++  KKE    + +L  L+    I+G +L  ++  + +VK+S+GP ++V     VD E +  G RV L+  TL I+  LP+E D     M  E+  ++S+  +GGL++QIR+++E +ELPL NPELF +VGI PPKGVLLYGPPGTGKTLLA+A+A   +A+F++VV S ++ K+IGE A+L+R++F
Sbjct:   10 DVEKNKMDLKEFKEKT-QIAELESKVLRLELKNKDISRENVQI-KKENEILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVF 234          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.485e-42
Identity = 93/227 (40.97%), Postives = 148/227 (65.20%), Query Frame = 2
Query:   50 DPVRRRNAMTEYRKKLLQHKEIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            D  + +  + E+++K  Q  E+ES+V  +        +EN++  KKE    + +L  L+    I+G +L  ++  + +VK+S+GP ++V     VD + +  G RV L+  TL I+  LP+E D     M  E+  ++S+  +GGL++QIR+++E +ELPL NPELF +VGI PPKGVLLYGPPGTGKTLLA+A+A   +A+F++VV S ++ K+IGE A+L+R++F
Sbjct:   10 DIEKNKMDLKEFKEKT-QIAELESKVLRLELKNKDISRENVQI-KKENEILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVF 234          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.537e-42
Identity = 85/202 (42.08%), Postives = 129/202 (63.86%), Query Frame = 2
Query:  101 QHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            Q +++ES  R ++      ++E  K + +++ L++   I+G +   +D+ R++V++S+GPR++V     V+   L +G R  L+  +L I+  LP   D  VY M   D    +Y  +GGL  QI E+RE++ELP+  P+LF ++GI PPKGVLLYGPPGTGKTLLA+A+A    A FL  V S ++ KYIGE ARL+RE+F
Sbjct:   38 QIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELVQKYIGEGARLVRELF 239          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 7.231e-42
Identity = 88/198 (44.44%), Postives = 129/198 (65.15%), Query Frame = 2
Query:  113 IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            +E ++ S+ + L   +++ N  + +L+ L +   I   VL  L + ++IV++SSGP  +V   S +D +KL  G+ V L     TI+  LP   D  V +    +  NV YS +GGL++QI E+RE IELPL NPELF  +GI PPKGVLLYGPPGTGKTLLA+A+A+  +A F++VV+S    K++GE AR++RE+F
Sbjct:   23 LEEKIESLTKELEKLRQDLNWYKGELEKLLAPPYIEAIVLDILPDGKVIVRSSSGPNLIVNVSSNIDIKKLKPGSLVALTQRGSTIVEVLPEREDAYVKSFEVIEKPNVHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVREVF 220          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.104e-41
Identity = 85/220 (38.64%), Postives = 135/220 (61.36%), Query Frame = 2
Query:   47 EDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            E  +  R+ +   R+   Q  E+  RVRS+KE              +L+ LQ  G  +GEV++ +  +++++K S   +Y+V     ++ + LT G RV L   +  + + LP ++DP+V  M  E   + +Y  VGGL +QI+E++E IELP+ +PELF  +GI  PKGV++YGPPGTGKTLLARA+A + D  F++V  S ++ KYIGE ++++RE+F
Sbjct:   37 EKEIVLRDKIENLRRLQAQRNELNGRVRSLKE--------------ELQQLQEPGSHVGEVVKVMGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELF 242          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 86/198 (43.43%), Postives = 128/198 (64.65%), Query Frame = 2
Query:  113 IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            ++ +VRS+ +   + +KE    ++++  L S   I   VL  +D+ R++VK+S+GP  +V   + VD   L  G  V L+    TI+  LP   DP+V  M  E+   V +  VGGL +QIRE+ E++ LP+ NP LF  +GI PPKGVLL+GPPGTGKTLLA+A+A   +A F++VV S +++K+IGE ARL+RE+F
Sbjct:   28 LKDKVRSLTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIF 225          
The following BLAST results are available for this feature:
BLAST of CF832526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 354
Match NameE-valueIdentityDescription
PSMR_SULIK1.318e-4340.63Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_SULIA1.318e-4340.63Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PSMR_METMP8.542e-4341.41Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM78.542e-4341.41Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM68.542e-4341.41Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM52.485e-4240.97Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METHJ5.537e-4242.08Proteasome-activating nucleotidase OS=Methanospiri... [more]
PSMR_SULTO7.231e-4244.44Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
PRS8_NAEFO2.104e-4138.6426S protease regulatory subunit 8 homolog OS=Naegl... [more]
PSMR_AERPE7.995e-4143.43Proteasome-activating nucleotidase OS=Aeropyrum pe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02A01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832526 ID=CF832526; Name=CF832526; organism=Citrus sinensis; type=EST; length=712bp
TTGATTTGCTCCCTTAATATCTCCGACTGCAACGATGAGCGAAGGAGAAG
ACCCCGTTAGACGCCGTAATGCCATGACGGAGTACCGTAAGAAGCTACTC
CAGCACAAAGAAATCGAATCTAGAGTTCGATCTGTTAAGGAGAATTTGAG
AGCTGCAAAGAAGGAGTTCAACAAAACAGAAGATGATTTGAAGTCTCTTC
AAAGTGTTGGGCAGATCATTGGAGAAGTTCTCAGACCTCTTGACAATGAA
CGCTTGATTGTTAAAGCTAGCAGCGGGCCCCGTTATGTGGTTGGATGCCG
CAGCAAAGTGGATAAAGAGAAGTTGACTTCGGGAACAAGAGTTGTTCTTG
ATATGACAACGCTCACAATCATGCGAGCTCTTCCTCGTGAAGTTGATCCG
GTTGTATATAACATGTTGCATGAAGATCCGGGTAATGTTAGCTATTCGGC
TGTGGGTGGTTTATCTGATCAGATCAGAGAATTAAGGGAATCTATTGAGC
TACCTTTGATGAATCCTGAGCTTTTCCTTAGAGTTGGAATTAAACCTCCC
AAGGGCGTTCTTCTTTATGGGCCTCCTGGAACTGGCAAGACATTATTAGC
ACGAGCAATTGCCAGTAACATAGATGCAAATTTTCTGAAGGTGGTTTCAA
GTGCCATTATTGATAAGTACATTGGGGAAAGTGCAAGGTTGATAAGAGAG
ATGTTTGGATAT
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