CF832526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40 Identity = 87/207 (42.03%), Postives = 137/207 (66.18%), Query Frame = 2 Query: 110 EIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 E+ES+V + +EN++ KKE + +L L+ I+G VL ++ + +VK+S+GP ++V V+ + + G RV L+ TL ++ LP+E D M E+ ++ + +GGL++QIR+++E +ELPL NPELF +VGI PPKGVLLYGPPGTGKTLLA+A+A +A+F++VV S ++ K+IGE A+L+R++F Sbjct: 29 ELESKVLRLELKNKDITRENVQI-KKENEILKRELDKLRIPPLILGTVLDRVNERKAVVKSSTGPNFLVNLSQFVEPDDIVPGARVCLNQQTLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVF 234
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40 Identity = 85/207 (41.06%), Postives = 131/207 (63.29%), Query Frame = 2 Query: 107 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 +E++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF 235
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40 Identity = 85/207 (41.06%), Postives = 131/207 (63.29%), Query Frame = 2 Query: 107 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 +E++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF 235
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40 Identity = 85/207 (41.06%), Postives = 131/207 (63.29%), Query Frame = 2 Query: 107 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 +E++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF 235
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40 Identity = 85/207 (41.06%), Postives = 133/207 (64.25%), Query Frame = 2 Query: 107 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 +E++ V +NLR + + N+ ++L+ LQ G +GEV++P+D ++++VK ++VV VD +T+ RV L + T+ + LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F Sbjct: 25 EELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 231
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40 Identity = 85/207 (41.06%), Postives = 131/207 (63.29%), Query Frame = 2 Query: 107 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 +E++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF 235
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40 Identity = 85/207 (41.06%), Postives = 131/207 (63.29%), Query Frame = 2 Query: 107 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 +E++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF 235
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.326e-40 Identity = 90/214 (42.06%), Postives = 129/214 (60.28%), Query Frame = 2 Query: 89 KKLLQHKEIESRVRSVKE----NLRAAKKEFNKT----EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 K LQH + R++ K L A + E N ++L+ LQ G +GEV++ + +++VK +YVV +D KLT TRV L + + LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F Sbjct: 34 KYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELF 247
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.038e-40 Identity = 89/211 (42.18%), Postives = 130/211 (61.61%), Query Frame = 2 Query: 98 LQH-KEIESRVRSVKENLR---AAKKEFNKT----EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 LQH E++ ++R NL A + E N ++L+ LQ G +GEV++ + +++VK +YVV +D K+T TRV L + + LP +VDP+V M E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F Sbjct: 37 LQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELF 247
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 3.968e-40 Identity = 84/207 (40.58%), Postives = 132/207 (63.77%), Query Frame = 2 Query: 107 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 +E++ V +NLR + + N+ ++L+ LQ G +GEV++P+D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F Sbjct: 28 EELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELF 234 The following BLAST results are available for this feature:
BLAST of CF832526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 354
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832526 ID=CF832526; Name=CF832526; organism=Citrus sinensis; type=EST; length=712bpback to top |