CF832526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.508e-39 Identity = 85/204 (41.67%), Postives = 129/204 (63.24%), Query Frame = 2 Query: 95 LLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 LL +E + +K A+++ +K +D L+ +G + +D IV +S GP Y VG S VDK++L G +++ L+++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A++ A FL+VV S +I KY+G+ +L+RE+F Sbjct: 75 LLMEEEFVANQERLKPQEEKAEEDRSKVDD----LRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELF 274
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.508e-39 Identity = 85/204 (41.67%), Postives = 129/204 (63.24%), Query Frame = 2 Query: 95 LLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 LL +E + +K A+++ +K +D L+ +G + +D IV +S GP Y VG S VDK++L G +++ L+++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A++ A FL+VV S +I KY+G+ +L+RE+F Sbjct: 75 LLMEEEFVANQERLKPQEEKAEEDRSKVDD----LRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELF 274
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39 Identity = 83/207 (40.10%), Postives = 130/207 (62.80%), Query Frame = 2 Query: 107 KEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 ++++ V +NLR + + N+ ++L+ LQ G +GEV+R +D ++++VK ++VV +D +T RV L + T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PE F +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F Sbjct: 24 EDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF 230
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.969e-39 Identity = 87/207 (42.03%), Postives = 131/207 (63.29%), Query Frame = 2 Query: 107 KEIESRVRSVKENLR---AAKKEFNKT----EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 +E+E +V ++LR A + E N +++L+ L + G + EV++ + +++VK + ++VV VD KLT TR L + T+ R LP ++DP+V M E + +Y VGGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F Sbjct: 25 EELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVVKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELF 231
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.572e-39 Identity = 90/225 (40.00%), Postives = 139/225 (61.78%), Query Frame = 2 Query: 68 NAMTEYRKKLLQHK----EIESRVRSV--------KENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 N + K+ LQ K E+ESR+ + +ENL+ K E +L ++ I+G V+ + +++VK+S+GP ++V V+ + L G RV L+ TLT++ LP D M ++ NV Y +GGL Q++E+RE +ELPL +PELF +VGI+PPKG+LLYGPPGTGKTLLA+A+A+ +A F++VV S ++ K+IGE A L++++F Sbjct: 33 NLKNDLLKEELQEKARIAELESRILKLELEKKELERENLQLMK-ENEILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIF 256
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.572e-39 Identity = 80/207 (38.65%), Postives = 136/207 (65.70%), Query Frame = 2 Query: 89 KKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 K+L +H E I+ + +K+ R+ K+E + ++++K +QSV +IG+ + +D IV++S+G YVV S +D+EKL + V L + ++ LP E D + + + +V+Y+ VGGL Q +E+RE++ELPL +L+ ++GI PP+GVLLYGPPGTGKT+L +A+A++ A+F++V S + KY+GE R++R++F Sbjct: 46 KRLQRHLEYIQLQEEYIKDEQRSLKRELVRAQEEIKRIQSVPLVIGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVF 252
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.359e-39 Identity = 77/191 (40.31%), Postives = 127/191 (66.49%), Query Frame = 2 Query: 134 VKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 +KE+ ++ K+E + ++++K +QSV +IG+ L +D IV +++G YVV S +D+E L V L + ++ LP E D + + ++ +VSY+ VGGL Q +E+RE++ELPL +L+ ++GI PP+GVLLYGPPGTGKT+L +A+A++ ANF++VV S + KY+GE R++R++F Sbjct: 30 IKEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVF 220
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 161.77 bits (408), Expect = 3.359e-39 Identity = 81/198 (40.91%), Postives = 125/198 (63.13%), Query Frame = 2 Query: 113 IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 +E + +E LR + + + + L+ +G + +D IV +S GP Y VG S VDK++L G +++ L+++ L EVDP+V M E SY+ +GGL QI+E++E++ELPL +PEL+ +GI+PPKGV+LYG PGTGKTLLA+A+A++ A FL+VV S +I KY+G+ +L+RE+F Sbjct: 82 MEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSLEEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELF 279
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4) HSP 1 Score: 161.384 bits (407), Expect = 4.387e-39 Identity = 81/207 (39.13%), Postives = 132/207 (63.77%), Query Frame = 2 Query: 107 KEIESRVRSVKENLRAAKKEFNKT-------EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 +E E ++RS EN+R + + N +D+L+ LQ G +GEV++ + +++++VK +Y+V ++ + L + RV L + + + L + DP+V M+ E + +Y VGGL+ QI+E++E IELP+ +PELF +GI PKGV+LYGPPGTGKTLLARA+A + D F++V + ++ KYIGE +R++RE+F Sbjct: 28 QETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIKIVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELF 234
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.483e-39 Identity = 79/219 (36.07%), Postives = 134/219 (61.19%), Query Frame = 2 Query: 50 DPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 D + + T+Y+K + +E + +K+ R KKE+ ++++K +QSV +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + ++ +V YS +GG+ Q +E+RE++ELPL + EL+ ++GI+PP+GVL+YGPPG GKT+LA A+A + A F++VV S + KY+GE R++R++F Sbjct: 30 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLANAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVF 248 The following BLAST results are available for this feature:
BLAST of CF832526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 354
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832526 ID=CF832526; Name=CF832526; organism=Citrus sinensis; type=EST; length=712bpback to top |