CF832526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38 Identity = 86/233 (36.91%), Postives = 141/233 (60.52%), Query Frame = 2 Query: 11 PLISPTATMSEGEDPVRRRNAMTEYRKKLLQHKE-IESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 P S T S+GED + R K L + E IE + VK+ L+ ++E + ++++K +QSV +IG+ + +D IV +++G Y V S +++E L V LD + ++ LP E D + + + +V+Y+ +GG Q +E+RE++ELPL + EL+ ++GI PP+GVLLYGPPGTGKT+LA+A+A + A F++VV S + KY+GE R++R++F Sbjct: 20 PETSITDVPSDGEDDLYAR------LKSLQRQLEFIEIQEEYVKDELKNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDQNNAIVGSTTGSNYYVRILSTINRELLKPSASVGLDRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVF 246
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.177e-38 Identity = 83/220 (37.73%), Postives = 134/220 (60.91%), Query Frame = 2 Query: 68 NAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTE-------DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 N + Y +K+ ++ E + +NLR + + N ++++ LQ G +GEV++ + +++VK +YVV +D +++ RV L + +++ LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +GI PKG+LLYGPPGTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F Sbjct: 15 NIVQYYTQKI---QDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELF 231
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38 Identity = 77/221 (34.84%), Postives = 134/221 (60.63%), Query Frame = 2 Query: 44 GEDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 G +P + + Y+K + + +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F Sbjct: 31 GPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVF 251
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38 Identity = 77/221 (34.84%), Postives = 134/221 (60.63%), Query Frame = 2 Query: 44 GEDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 G +P + + Y+K + + +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F Sbjct: 31 GPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVF 251
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38 Identity = 77/221 (34.84%), Postives = 134/221 (60.63%), Query Frame = 2 Query: 44 GEDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 G +P + + Y+K + + +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F Sbjct: 31 GPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVF 251
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38 Identity = 79/208 (37.98%), Postives = 132/208 (63.46%), Query Frame = 2 Query: 83 YRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 Y++ + + +E R V++ + K+E + ++L ++SV I+G+ L P+D+ IV +++G +VV S VD+E L T V L + I+ LP EVD + M + +V+Y VGGL Q +E++E++ELPL+ +L+ ++GI PP+GVLLYGPPGTGKT+L +A+A++ A F++V S + KY+GE R++R++F Sbjct: 13 YKQMERKLRLLEIREGYVRKEIETLKREERHSREELDRVKSVPLIMGQFLEPIDSSTAIVGSTAGSNFVVRILSTVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGESEKPSVTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVF 220
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38 Identity = 77/221 (34.84%), Postives = 134/221 (60.63%), Query Frame = 2 Query: 44 GEDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 G +P + + Y+K + + +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP E D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F Sbjct: 31 GPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVF 251
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38 Identity = 84/206 (40.78%), Postives = 128/206 (62.14%), Query Frame = 2 Query: 89 KKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 +++ H +E S E L+ +K+ + + L+ ++ IG + +D++ IV + + P Y V S VDKE L G V+L T++I+ L + DP+V M + SYS +GGL QI+E++ES+ELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A+ A FL++V S +I KY+G+ RL R++F Sbjct: 63 ERIKDHLLLEEEFVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIF 268
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38 Identity = 80/176 (45.45%), Postives = 117/176 (66.48%), Query Frame = 2 Query: 179 EDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 E ++ L+ +G + +D+ IV ++ GP + V S VDK KL G V+L+ TL+++ + EVDP+V M E SYS +GGL Q++E++E+IELPL +PEL+ +GIKPPKGV+LYG PGTGKTLLA+A+A+ A FL+VV S +I KY+G+ +L+RE+F Sbjct: 95 EKIIEELRGDPLTVGNLEEIIDDNHAIVSSTVGPEHYVRIMSFVDKSKLYLGATVLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELF 270
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.843e-37 Identity = 76/221 (34.39%), Postives = 133/221 (60.18%), Query Frame = 2 Query: 44 GEDPVRRRNAMTEYRKKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 G +P + + Y+K + + +E + +K+ + KKEF ++++K +QS+ +IG+ L +D IV +++G Y V S +D+E L V L + ++ LP D + + + +V Y+ +GG+ Q +E+RE++ELPL + EL+ ++GI PP+GVL+YGPPG GKT+LA+A+A + A F++VV S + KY+GE R++R++F Sbjct: 31 GPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVASTTGSNYYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVF 251 The following BLAST results are available for this feature:
BLAST of CF832526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 354
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832526 ID=CF832526; Name=CF832526; organism=Citrus sinensis; type=EST; length=712bpback to top |