CF832526

Overview
NameCF832526
Unique NameCF832526
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10082 contig Csv1_Contig10082:15..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.929e-36
Identity = 71/155 (45.81%), Postives = 103/155 (66.45%), Query Frame = 2
Query:  242 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            ++ + ++      ++VVG   +V    +  G RV +D +   I   LP  +DP V  M  E+  +V+YS VGG  DQI +LRE +ELPL++PE F  +GI PPKG+LLYGPPGTGKTL ARA+A+  DA F++V+ S ++ KY+GE AR++RE+F
Sbjct:  141 EDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELF 295          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.929e-36
Identity = 70/155 (45.16%), Postives = 105/155 (67.74%), Query Frame = 2
Query:  242 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            D+ + ++      ++VVG   KV    +  G RV +D     I   LP ++DP V  M  E+  +V+Y+ VGG  +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLARA+A+  DA F++V+ S ++ KY+GE AR++RE+F
Sbjct:  100 DDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 254          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 7.744e-36
Identity = 84/232 (36.21%), Postives = 137/232 (59.05%), Query Frame = 2
Query:   38 SEGEDPVRRRNAMTEY---RKKLLQHKEIESRVRSVKE---NLRAAKKEFNKTEDD---LKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            S+G D   +  A+T +   R KLL+ + I+  +   +E   N    K +  + E++   +  L+     +G +   +D++  IV  + G  + V   S VDKE+L  G  V+L+     ++  L  + DP+V  M  E     +Y+ VGGL  QI+E++E++ELPL +PE +  +GI+PPKGV+LYG PGTGKTLLA+A+A+   A FL++V S +I KY+G+  +++RE+F
Sbjct:   43 SKGPDAASKLPAVTPHARCRLKLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELF 274          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.321e-35
Identity = 81/206 (39.32%), Postives = 128/206 (62.14%), Query Frame = 2
Query:   89 KKLLQHKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            KKL     +E  + S+ E  ++++   N  +  ++ L+     +G +   +D+   I+    G  Y V   S VDK+ L  G  V+L+    +++  L  E+DP+V  M  E   + +Y+ +GGL +QI+E++ES+ELPL NPEL+  +GIKPPKGV+LYG PGTGKTLLA+A+A+   A FL+VV + +I +Y+GE  +L+RE+F
Sbjct:   51 KKLAHLLSLEDNILSLCEPDKSSEGS-NSQKHVVEQLRGSPLSVGTLEEFVDDHHGIITTGVGLEYYVNIMSFVDKDLLEPGCTVLLNYKDNSVVGVLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVILYGLPGTGKTLLAKAVANQTSATFLRVVGTELIQEYLGEGPKLVRELF 255          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.725e-35
Identity = 69/155 (44.52%), Postives = 105/155 (67.74%), Query Frame = 2
Query:  242 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            ++ + ++      ++VVG   KV    +  G RV +D     I   LP ++DP V  M  E+  +V+Y+ VGG  +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLARA+A+  DA F++V+ S ++ KY+GE AR++RE+F
Sbjct:  100 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 254          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.725e-35
Identity = 69/155 (44.52%), Postives = 105/155 (67.74%), Query Frame = 2
Query:  242 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            ++ + ++      ++VVG   KV    +  G RV +D     I   LP ++DP V  M  E+  +V+Y+ VGG  +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLARA+A+  DA F++V+ S ++ KY+GE AR++RE+F
Sbjct:   99 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 253          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.725e-35
Identity = 69/155 (44.52%), Postives = 105/155 (67.74%), Query Frame = 2
Query:  242 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            ++ + ++      ++VVG   KV    +  G RV +D     I   LP ++DP V  M  E+  +V+Y+ VGG  +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLARA+A+  DA F++V+ S ++ KY+GE AR++RE+F
Sbjct:  100 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 254          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.562e-35
Identity = 80/229 (34.93%), Postives = 137/229 (59.83%), Query Frame = 2
Query:   26 TATMSEGEDPVRRRNAMTEYRKKLLQHKEIESRVRS--VKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            TA ++  ++    R A    + K L+ K     ++   +K   +  K+E    ++++K ++SV  +IG++L  +D+   IV+++SG    V   S +D+E L     V L   +  ++  LP E D  ++ +  ++  + SYS +GG   Q +E+RE++ELPL +  L+ ++GI PP+GVLLYGPPGTGKT+LA+A+A +  A F++VV S  + KY+GE  RL+R++F
Sbjct:    8 TAKVTVTKEASHHREADLYQKMKSLESKLDFFNIQEEYIKYEYKNLKRELLHAQEEVKRIRSVPLLIGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVF 236          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.118e-34
Identity = 77/185 (41.62%), Postives = 112/185 (60.54%), Query Frame = 2
Query:  152 AAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            AA K+  + E  L+  +    I  +   P    R ++      ++VV     V    +  G RV +D     I   LP ++DP V  M  E+  +V+YS VGG  DQI +LRE +E PL++PE ++ +GI+PPKGVLLYGPPGTGKTL ARA+A+  DA F++V+ S ++ KY+GE AR++RE+F
Sbjct:   83 AADKQAMQQEQPLQVARCTKIITSDKHDP----RYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 263          
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 3.253e-34
Identity = 81/241 (33.61%), Postives = 134/241 (55.60%), Query Frame = 2
Query:   23 PTATMSEGEDPVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTED-------DLKSLQS-----VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706
            P   + EG+  + +    + Y +++ Q   +I+  ++ + E     + +             D ++LQS     V +    +    ++ + I+      ++VV    +V    +  G RV +D     I   LP ++DP V  M  E+  +V+YS VGG  +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+  DA F++V+ S ++ KY+GE AR++RE+F
Sbjct:   21 PIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIITADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 261          
The following BLAST results are available for this feature:
BLAST of CF832526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 354
Match NameE-valueIdentityDescription
PRS7_YEAST5.929e-3645.8126S protease regulatory subunit 7 homolog OS=Sacch... [more]
PRS7_ORYSJ5.929e-3645.1626S protease regulatory subunit 7 OS=Oryza sativa ... [more]
PRS4_CAEEL7.744e-3636.21Probable 26S protease regulatory subunit 4 OS=Caen... [more]
PRS4_ENCCU1.321e-3539.3226S protease regulatory subunit 4 homolog OS=Encep... [more]
PRS7_SPIOL1.725e-3544.5226S protease regulatory subunit 7 OS=Spinacia oler... [more]
PRS7_PRUPE1.725e-3544.5226S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7A_ARATH1.725e-3544.5226S protease regulatory subunit 7 homolog A OS=Ara... [more]
PRS6B_DICDI8.562e-3534.9326S protease regulatory subunit 6B homolog OS=Dict... [more]
PRS7_CAEEL1.118e-3441.6226S protease regulatory subunit 7 OS=Caenorhabditi... [more]
PRS7_PONAB3.253e-3433.6126S protease regulatory subunit 7 OS=Pongo abelii ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02A01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832526 ID=CF832526; Name=CF832526; organism=Citrus sinensis; type=EST; length=712bp
TTGATTTGCTCCCTTAATATCTCCGACTGCAACGATGAGCGAAGGAGAAG
ACCCCGTTAGACGCCGTAATGCCATGACGGAGTACCGTAAGAAGCTACTC
CAGCACAAAGAAATCGAATCTAGAGTTCGATCTGTTAAGGAGAATTTGAG
AGCTGCAAAGAAGGAGTTCAACAAAACAGAAGATGATTTGAAGTCTCTTC
AAAGTGTTGGGCAGATCATTGGAGAAGTTCTCAGACCTCTTGACAATGAA
CGCTTGATTGTTAAAGCTAGCAGCGGGCCCCGTTATGTGGTTGGATGCCG
CAGCAAAGTGGATAAAGAGAAGTTGACTTCGGGAACAAGAGTTGTTCTTG
ATATGACAACGCTCACAATCATGCGAGCTCTTCCTCGTGAAGTTGATCCG
GTTGTATATAACATGTTGCATGAAGATCCGGGTAATGTTAGCTATTCGGC
TGTGGGTGGTTTATCTGATCAGATCAGAGAATTAAGGGAATCTATTGAGC
TACCTTTGATGAATCCTGAGCTTTTCCTTAGAGTTGGAATTAAACCTCCC
AAGGGCGTTCTTCTTTATGGGCCTCCTGGAACTGGCAAGACATTATTAGC
ACGAGCAATTGCCAGTAACATAGATGCAAATTTTCTGAAGGTGGTTTCAA
GTGCCATTATTGATAAGTACATTGGGGAAAGTGCAAGGTTGATAAGAGAG
ATGTTTGGATAT
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