CF832526
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.249e-34 Identity = 81/241 (33.61%), Postives = 135/241 (56.02%), Query Frame = 2 Query: 23 PTATMSEGEDPVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTED-------DLKSLQS-----VGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 P ++ EG+ + + + Y +++ Q +I+ ++ + E + + D ++LQS V + + ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F Sbjct: 21 PIRSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 261
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.249e-34 Identity = 67/142 (47.18%), Postives = 96/142 (67.61%), Query Frame = 2 Query: 281 RYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 ++VV +V + G RV D I LP ++DP V M E+ +V+Y VGG +QI LRE +ELPL++PE F+++GI PPKG++LYGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F Sbjct: 124 KFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELF 265
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.249e-34 Identity = 69/155 (44.52%), Postives = 103/155 (66.45%), Query Frame = 2 Query: 242 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 ++ + +V +YVVG K + +G RV +D I LP ++DP V M E+ + +YS +GG +QI ++RE +ELP+++PE F+R+GI PPKGVL YGPPG+GKTL+ARA+A+ A F++VV S ++ KYIGE AR++RE+F Sbjct: 137 EDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELF 291
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5) HSP 1 Score: 144.436 bits (363), Expect = 5.549e-34 Identity = 69/155 (44.52%), Postives = 103/155 (66.45%), Query Frame = 2 Query: 242 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F Sbjct: 107 EDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 261
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 5.549e-34 Identity = 69/155 (44.52%), Postives = 103/155 (66.45%), Query Frame = 2 Query: 242 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F Sbjct: 107 EDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 261
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 5.549e-34 Identity = 69/155 (44.52%), Postives = 103/155 (66.45%), Query Frame = 2 Query: 242 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F Sbjct: 107 EDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 261
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_BOVIN (26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 5.549e-34 Identity = 69/155 (44.52%), Postives = 103/155 (66.45%), Query Frame = 2 Query: 242 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F Sbjct: 107 EDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 261
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 143.28 bits (360), Expect = 1.236e-33 Identity = 69/155 (44.52%), Postives = 102/155 (65.81%), Query Frame = 2 Query: 242 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 ++ + I+ ++VV +V + G RV +D I LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGVLL+GPPGTGKTL ARA+A+ DA F+ V+ S ++ KY+GE AR++RE+F Sbjct: 107 EDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELF 261
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.698e-33 Identity = 75/229 (32.75%), Postives = 138/229 (60.26%), Query Frame = 2 Query: 23 PTATMSEGEDPVRRRNAMTEYRKKLLQ-HKEIESRVRSVKENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 PT + P R NA+ ++ ++ + E+++++ V+ ++E N+ + + ++L++ + V ++ ++K + V+ S + L G RV ++ + ++ R L E D M ++ +V+Y+ +GGL DQ+RE+RE++E PL+NPE F VG++PP GVLL+GPPGTGKT+LA+A+A+ DA+F+K+ S ++ K+IGE +RL+R++F Sbjct: 11 PTLDVDPESTPAERLNALQDHYVDIVAVNGELQAQLDDVEARREELREEVNRLQRENETLKTASLYLATVEDLPEDGSAVIKQHGNNQEVLTELSPRLADTLEVGDRVAIN-DSFSVQRVLDDETDARAQAMEVDESPSVTYADIGGLDDQLREVREAVEDPLVNPEKFDAVGVEPPSGVLLHGPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLF 238
BLAST of CF832526 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.013e-33 Identity = 66/154 (42.86%), Postives = 100/154 (64.94%), Query Frame = 2 Query: 245 NERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF 706 N + I+ ++VV K+ + G RV +D I LP ++D V M E+ +++Y VGG +QI +LRE +E+PL++PE F+ +GI PPKGVL+YGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++R++F Sbjct: 103 NAKYIITVKQIAKFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLF 256 The following BLAST results are available for this feature:
BLAST of CF832526 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 354
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832526 ID=CF832526; Name=CF832526; organism=Citrus sinensis; type=EST; length=712bpback to top |