CF832532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS263_ARATH (40S ribosomal protein S26-3 OS=Arabidopsis thaliana GN=RPS26C PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.695e-39 Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 283 MTFKR NGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+GYTLPKLYAK QYCVSCAIHSH Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26_ORYSJ (40S ribosomal protein S26 OS=Oryza sativa subsp. japonica GN=RPS26 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 4.932e-39 Identity = 71/82 (86.59%), Postives = 77/82 (93.90%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 283 MTFKR NGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+DGY LPKLYAK+ +CVSCAIH+H Sbjct: 1 MTFKRRNGGRNKHGRGHVKYIRCSNCAKCCPKDKAIKRFQVRNIVEQAAIRDVQEACVHDGYVLPKLYAKVHHCVSCAIHAH 82
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS262_ARATH (40S ribosomal protein S26-2 OS=Arabidopsis thaliana GN=RPS26B PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 6.442e-39 Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 283 MTFKR NGGRNKH RGHV IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+GYTLPKLYAK QYCVSCAIHSH Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS261_ARATH (40S ribosomal protein S26-1 OS=Arabidopsis thaliana GN=RPS26A PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 6.442e-39 Identity = 73/82 (89.02%), Postives = 76/82 (92.68%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 283 MTFKR NGGRNKH RGHV IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+GYTLPKLYAK QYCVSCAIHSH Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26_DROME (40S ribosomal protein S26 OS=Drosophila melanogaster GN=RpS26 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.785e-31 Identity = 59/81 (72.84%), Postives = 69/81 (85.19%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 280 MT KR NGGRNKH RGHVK +RC+NC +C PKDKAIK+F++RNIVE AAVRD+ EA ++D Y LPKLYAK+ YCVSCAIHS Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIHS 81
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26_CAEEL (40S ribosomal protein S26 OS=Caenorhabditis elegans GN=rps-26 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.453e-30 Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 280 MTFKR N GRNK RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A Y Y LPKLY K+ YC++CAIHS Sbjct: 1 MTFKRRNHGRNKKNRGHVAFIRCTNCGRCCPKDKAIKKFVVRNIVEAAAVRDIGDASAYTQYALPKLYHKLHYCIACAIHS 81
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26_ANOGA (40S ribosomal protein S26 OS=Anopheles gambiae GN=RpS26 PE=3 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.185e-30 Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 280 MT KR NGGR KH RGHVK +RC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A VY Y LPKLYAK+ YCVSCAIHS Sbjct: 1 MTKKRRNGGRCKHNRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYCVSCAIHS 81
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26B_SCHPO (40S ribosomal protein S26-B OS=Schizosaccharomyces pombe GN=rps26b PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.466e-30 Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 280 MT KR N GRNKHGRGHVKF+RC NC + PKDKAIKR+ +RN+VE AA+RD+ EA VY YT+PKLY K+QYCVSCAIHS Sbjct: 1 MTQKRRNNGRNKHGRGHVKFVRCINCSRAVPKDKAIKRWTIRNMVETAAIRDLSEASVYSEYTIPKLYIKLQYCVSCAIHS 81
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26_SCHCO (40S ribosomal protein S26 OS=Schizophyllum commune GN=RPS26 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.138e-30 Identity = 58/82 (70.73%), Postives = 66/82 (80.49%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHSH 283 MT KR NGGRNK GRGHV F+RCSNC +C KDKAIKRF VRN+VE AA+RD+ +A VY Y +PKLY K+ YCVSCAIHSH Sbjct: 1 MTKKRRNGGRNKSGRGHVTFVRCSNCSRCVAKDKAIKRFTVRNMVESAAIRDISDASVYPEYAIPKLYIKIAYCVSCAIHSH 82
BLAST of CF832532 vs. ExPASy Swiss-Prot
Match: RS26_OCTVU (40S ribosomal protein S26 OS=Octopus vulgaris GN=RPS26 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.138e-30 Identity = 58/81 (71.60%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 38 MTFKRSNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDGYTLPKLYAKMQYCVSCAIHS 280 MT KR N GR K GRGHVK+IRC+NC +C PKDKAIK+F++RNIVE AAVRD+ +A VY+ Y LPKLYAK+ YCVSCAIHS Sbjct: 1 MTSKRRNNGRGKKGRGHVKYIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYEVYALPKLYAKLLYCVSCAIHS 81 The following BLAST results are available for this feature:
BLAST of CF832532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832532 ID=CF832532; Name=CF832532; organism=Citrus sinensis; type=EST; length=652bpback to top |