CF832535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LAWIP (Ribosome-recycling factor OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=frr PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 69/142 (48.59%), Postives = 109/142 (76.76%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++ +++D I+V+YYG+P + +A I PDSSS+ IQP+DK++ IEKAI+ S+LG+TP NDG++IR+TLP LT +RRK+L K+ K E+ K+A+RNIRRDA + ++L+K K +SED +K + D+QK+TD Y+K++++ Sbjct: 35 ASTSIVDTIKVDYYGTPTPINQLASIAIPDSSSITIQPWDKTAFNPIEKAILKSELGLTPINDGKIIRITLPPLTEDRRKDLVKLARKYGEDTKIAIRNIRRDANEQLKRLEKNKFISEDELKGFTEDIQKMTDNYIKEVET 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LACLA (Ribosome-recycling factor OS=Lactococcus lactis subsp. lactis GN=frr PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 71/143 (49.65%), Postives = 106/143 (74.13%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N ++LD+++V YYG+P L +A I P++ L++ P+DKS LK IEKA+ SDLG+TP NDG VIRL +P LT ERR+EL K + K E KVA+RNIRRDA+ +K +K K+++ED++KDL +++QK+TD+ +K+ D + Sbjct: 32 ANASLLDRVQVVYYGAPTPLNQLASITIPEARVLMVTPFDKSILKDIEKALYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKYIESAKVAIRNIRRDAMDTAKKSEKAKEITEDDLKDLENNIQKVTDDAVKEADRL 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_BDEBA (Ribosome-recycling factor OS=Bdellovibrio bacteriovorus GN=frr PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 76/143 (53.15%), Postives = 105/143 (73.43%), Query Frame = -2 Query: 213 AMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 641 +MLD I V YYG+P L +A I+TPD+ S LI P++ + LK IE+AI+ S+LGM P NDG+VIRL +P LT ERRK+L+K V K AEE +VAVR RRDA +KLQK+K +SED K +D+QK+TD+++KK+D + ++ Sbjct: 36 SMLDGIRVNYYGTPSPLSQVASISTPDAKSFLIAPWEVAILKDIEQAIIKSELGMAPMNDGKVIRLKVPDLTEERRKDLAKQVKKIAEEARVAVRMARRDANDEVKKLQKDKAVSEDEGKKAEADIQKVTDDFIKKVDQVAEE 178
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_BACWK (Ribosome-recycling factor OS=Bacillus weihenstephanensis (strain KBAB4) GN=frr PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37 Identity = 72/145 (49.66%), Postives = 108/145 (74.48%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 ++ ++LDK++V+YYG+P + +A I P++ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KVAVRN+RRD+ +KL+K ++ED+++ + D+QK TD+Y+ K+D I K Sbjct: 32 ASSSVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDSNDDLKKLEKAGDITEDDLRGYTEDIQKETDKYIAKVDEIAK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CLONN (Ribosome-recycling factor OS=Clostridium novyi (strain NT) GN=frr PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37 Identity = 72/143 (50.35%), Postives = 105/143 (73.43%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +NPAMLD++ VEYYGS + +A +++P+ LLIQP+DK+SLK IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK++ K V K EE K+A+R+IRR+ + L+K ++ED K+ S +QK+TD+Y+ +ID+I Sbjct: 32 ANPAMLDRVNVEYYGSETPINQLANVSSPEPRVLLIQPWDKNSLKDIEKAILQSDLGLNPSNDGSVIRLIIPELTEETRKDIVKKVKKIGEESKIAIRSIRREGNDKIKNLKKNNDITEDEAKEGESSVQKITDKYITEIDNI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CLOD6 (Ribosome-recycling factor OS=Clostridium difficile (strain 630) GN=frr PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37 Identity = 73/143 (51.05%), Postives = 107/143 (74.83%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N MLDKI V+YYG+P + I I+ P+ L+I P+DKS++ IEKAI +SDLG+ P+NDGEVIRL++P LT ERRKEL+K +K AEE KV +RN RRDA + +K++K +L+ED +K ++QK+TD+++K+ID++ Sbjct: 32 ANAQMLDKIRVDYYGTPTPINQIGAISVPEPRILMISPWDKSAMHEIEKAIANSDLGLNPSNDGEVIRLSVPALTEERRKELAKKASKAAEEFKVRIRNERRDANEKIKKMEKGGELTEDELKKAQDEVQKMTDKFIKEIDTL 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STRSY (Ribosome-recycling factor OS=Streptococcus suis (strain 05ZYH33) GN=frr PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 75/143 (52.45%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N ++LD+I VEYYGSP L +A I P++ LLI P+DKS LK IE+A+ +SDLG+TP +DG VIRL +P LT E RK L+K V K E KVA+RNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 32 ANASLLDRISVEYYGSPTPLNQLAGITVPEARVLLITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVIPALTEETRKNLAKDVKKVGENSKVAIRNIRRDAMDEAKKAEKAKEITEDELKTLEKDIQKVTDDAIKTIDKM 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STRS2 (Ribosome-recycling factor OS=Streptococcus suis (strain 98HAH33) GN=frr PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 75/143 (52.45%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N ++LD+I VEYYGSP L +A I P++ LLI P+DKS LK IE+A+ +SDLG+TP +DG VIRL +P LT E RK L+K V K E KVA+RNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 32 ANASLLDRISVEYYGSPTPLNQLAGITVPEARVLLITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVIPALTEETRKNLAKDVKKVGENSKVAIRNIRRDAMDEAKKAEKAKEITEDELKTLEKDIQKVTDDAIKTIDKM 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LACLS (Ribosome-recycling factor OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=frr PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 70/143 (48.95%), Postives = 106/143 (74.13%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N ++LD+++V YYG+P L +A I P++ L++ P+DKS LK IEK++ SDLG+TP NDG VIRL +P LT ERR+EL K + K E KVA+RNIRRDA+ +K +K K+++ED++KDL +++QK+TD+ +K+ D + Sbjct: 32 ANASLLDRVQVVYYGAPTPLNQLASITIPEARVLMVTPFDKSILKDIEKSLYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKYIESAKVAIRNIRRDAMDTAKKSEKAKEITEDDLKDLENEIQKVTDDAVKEADRL 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_DESRM (Ribosome-recycling factor OS=Desulfotomaculum reducens (strain MI-1) GN=frr PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37 Identity = 76/145 (52.41%), Postives = 107/145 (73.79%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 + P++LDK+ V YYG+P L +A I+ P++ L+IQP+DKS + +EKAI+ SD+G+TP++DG VIRL +PQLT ERR EL KV+ K+AEEG+VAVRNIRRD + + QK+ + ED K +LQKLTD+Y+K+ID + K Sbjct: 32 ATPSILDKVTVSYYGTPTPLNQLANISVPEARVLVIQPWDKSVIPEVEKAILKSDVGITPSSDGTVIRLIIPQLTQERRTELVKVIKKKAEEGRVAVRNIRRDTNDSIKAKQKD-GIPEDEAKRGQDELQKLTDKYVKEIDEMVK 175 The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bpback to top |