Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_LAWIP (Ribosome-recycling factor OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=frr PE=3 SV=1)
HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37
Identity = 69/142 (48.59%), Postives = 109/142 (76.76%), Query Frame = -2
Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650
++ +++D I+V+YYG+P + +A I PDSSS+ IQP+DK++ IEKAI+ S+LG+TP NDG++IR+TLP LT +RRK+L K+ K E+ K+A+RNIRRDA + ++L+K K +SED +K + D+QK+TD Y+K++++
Sbjct: 35 ASTSIVDTIKVDYYGTPTPINQLASIAIPDSSSITIQPWDKTAFNPIEKAILKSELGLTPINDGKIIRITLPPLTEDRRKDLVKLARKYGEDTKIAIRNIRRDANEQLKRLEKNKFISEDELKGFTEDIQKMTDNYIKEVET 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_LACLA (Ribosome-recycling factor OS=Lactococcus lactis subsp. lactis GN=frr PE=3 SV=1)
HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37
Identity = 71/143 (49.65%), Postives = 106/143 (74.13%), Query Frame = -2
Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650
+N ++LD+++V YYG+P L +A I P++ L++ P+DKS LK IEKA+ SDLG+TP NDG VIRL +P LT ERR+EL K + K E KVA+RNIRRDA+ +K +K K+++ED++KDL +++QK+TD+ +K+ D +
Sbjct: 32 ANASLLDRVQVVYYGAPTPLNQLASITIPEARVLMVTPFDKSILKDIEKALYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKYIESAKVAIRNIRRDAMDTAKKSEKAKEITEDDLKDLENNIQKVTDDAVKEADRL 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_BDEBA (Ribosome-recycling factor OS=Bdellovibrio bacteriovorus GN=frr PE=3 SV=1)
HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37
Identity = 76/143 (53.15%), Postives = 105/143 (73.43%), Query Frame = -2
Query: 213 AMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 641
+MLD I V YYG+P L +A I+TPD+ S LI P++ + LK IE+AI+ S+LGM P NDG+VIRL +P LT ERRK+L+K V K AEE +VAVR RRDA +KLQK+K +SED K +D+QK+TD+++KK+D + ++
Sbjct: 36 SMLDGIRVNYYGTPSPLSQVASISTPDAKSFLIAPWEVAILKDIEQAIIKSELGMAPMNDGKVIRLKVPDLTEERRKDLAKQVKKIAEEARVAVRMARRDANDEVKKLQKDKAVSEDEGKKAEADIQKVTDDFIKKVDQVAEE 178
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_BACWK (Ribosome-recycling factor OS=Bacillus weihenstephanensis (strain KBAB4) GN=frr PE=3 SV=1)
HSP 1 Score: 154.836 bits (390), Expect = 3.501e-37
Identity = 72/145 (49.66%), Postives = 108/145 (74.48%), Query Frame = -2
Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650
++ ++LDK++V+YYG+P + +A I P++ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KVAVRN+RRD+ +KL+K ++ED+++ + D+QK TD+Y+ K+D I K
Sbjct: 32 ASSSVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDSNDDLKKLEKAGDITEDDLRGYTEDIQKETDKYIAKVDEIAK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_CLONN (Ribosome-recycling factor OS=Clostridium novyi (strain NT) GN=frr PE=3 SV=1)
HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37
Identity = 72/143 (50.35%), Postives = 105/143 (73.43%), Query Frame = -2
Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650
+NPAMLD++ VEYYGS + +A +++P+ LLIQP+DK+SLK IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK++ K V K EE K+A+R+IRR+ + L+K ++ED K+ S +QK+TD+Y+ +ID+I
Sbjct: 32 ANPAMLDRVNVEYYGSETPINQLANVSSPEPRVLLIQPWDKNSLKDIEKAILQSDLGLNPSNDGSVIRLIIPELTEETRKDIVKKVKKIGEESKIAIRSIRREGNDKIKNLKKNNDITEDEAKEGESSVQKITDKYITEIDNI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_CLOD6 (Ribosome-recycling factor OS=Clostridium difficile (strain 630) GN=frr PE=3 SV=1)
HSP 1 Score: 154.451 bits (389), Expect = 4.572e-37
Identity = 73/143 (51.05%), Postives = 107/143 (74.83%), Query Frame = -2
Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650
+N MLDKI V+YYG+P + I I+ P+ L+I P+DKS++ IEKAI +SDLG+ P+NDGEVIRL++P LT ERRKEL+K +K AEE KV +RN RRDA + +K++K +L+ED +K ++QK+TD+++K+ID++
Sbjct: 32 ANAQMLDKIRVDYYGTPTPINQIGAISVPEPRILMISPWDKSAMHEIEKAIANSDLGLNPSNDGEVIRLSVPALTEERRKELAKKASKAAEEFKVRIRNERRDANEKIKKMEKGGELTEDELKKAQDEVQKMTDKFIKEIDTL 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_STRSY (Ribosome-recycling factor OS=Streptococcus suis (strain 05ZYH33) GN=frr PE=3 SV=1)
HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37
Identity = 75/143 (52.45%), Postives = 103/143 (72.03%), Query Frame = -2
Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650
+N ++LD+I VEYYGSP L +A I P++ LLI P+DKS LK IE+A+ +SDLG+TP +DG VIRL +P LT E RK L+K V K E KVA+RNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID +
Sbjct: 32 ANASLLDRISVEYYGSPTPLNQLAGITVPEARVLLITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVIPALTEETRKNLAKDVKKVGENSKVAIRNIRRDAMDEAKKAEKAKEITEDELKTLEKDIQKVTDDAIKTIDKM 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_STRS2 (Ribosome-recycling factor OS=Streptococcus suis (strain 98HAH33) GN=frr PE=3 SV=1)
HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37
Identity = 75/143 (52.45%), Postives = 103/143 (72.03%), Query Frame = -2
Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650
+N ++LD+I VEYYGSP L +A I P++ LLI P+DKS LK IE+A+ +SDLG+TP +DG VIRL +P LT E RK L+K V K E KVA+RNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID +
Sbjct: 32 ANASLLDRISVEYYGSPTPLNQLAGITVPEARVLLITPFDKSILKDIERALNASDLGLTPQSDGTVIRLVIPALTEETRKNLAKDVKKVGENSKVAIRNIRRDAMDEAKKAEKAKEITEDELKTLEKDIQKVTDDAIKTIDKM 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_LACLS (Ribosome-recycling factor OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=frr PE=3 SV=1)
HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37
Identity = 70/143 (48.95%), Postives = 106/143 (74.13%), Query Frame = -2
Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650
+N ++LD+++V YYG+P L +A I P++ L++ P+DKS LK IEK++ SDLG+TP NDG VIRL +P LT ERR+EL K + K E KVA+RNIRRDA+ +K +K K+++ED++KDL +++QK+TD+ +K+ D +
Sbjct: 32 ANASLLDRVQVVYYGAPTPLNQLASITIPEARVLMVTPFDKSILKDIEKSLYESDLGITPANDGSVIRLVIPMLTEERRRELVKEMGKYIESAKVAIRNIRRDAMDTAKKSEKAKEITEDDLKDLENEIQKVTDDAVKEADRL 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_DESRM (Ribosome-recycling factor OS=Desulfotomaculum reducens (strain MI-1) GN=frr PE=3 SV=1)
HSP 1 Score: 154.066 bits (388), Expect = 5.972e-37
Identity = 76/145 (52.41%), Postives = 107/145 (73.79%), Query Frame = -2
Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650
+ P++LDK+ V YYG+P L +A I+ P++ L+IQP+DKS + +EKAI+ SD+G+TP++DG VIRL +PQLT ERR EL KV+ K+AEEG+VAVRNIRRD + + QK+ + ED K +LQKLTD+Y+K+ID + K
Sbjct: 32 ATPSILDKVTVSYYGTPTPLNQLANISVPEARVLVIQPWDKSVIPEVEKAILKSDVGITPSSDGTVIRLIIPQLTQERRTELVKVIKKKAEEGRVAVRNIRRDTNDSIKAKQKD-GIPEDEAKRGQDELQKLTDKYVKEIDEMVK 175
The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 500
50 100 150 200 250 300 350 400 450 500 550 600 650 Expect = 3.50e-37 / Id = 48.59 Expect = 3.50e-37 / Id = 49.65 Expect = 3.50e-37 / Id = 53.15 Expect = 3.50e-37 / Id = 49.66 Expect = 4.57e-37 / Id = 50.35 Expect = 4.57e-37 / Id = 51.05 Expect = 5.97e-37 / Id = 52.45 Expect = 5.97e-37 / Id = 52.45 Expect = 5.97e-37 / Id = 48.95 Expect = 5.97e-37 / Id = 52.41 Sequence RRF_LAWIP RRF_LACLA RRF_BDEBA RRF_BACWK RRF_CLONN RRF_CLOD6 RRF_STRSY RRF_STRS2 RRF_LACLS RRF_DESRM
Match Name E-value Identity Description
RRF_LAWIP 3.501e-37 48.59 Ribosome-recycling factor OS=Lawsonia intracellula... [more]
RRF_LACLA 3.501e-37 49.65 Ribosome-recycling factor OS=Lactococcus lactis su... [more]
RRF_BDEBA 3.501e-37 53.15 Ribosome-recycling factor OS=Bdellovibrio bacterio... [more]
RRF_BACWK 3.501e-37 49.66 Ribosome-recycling factor OS=Bacillus weihenstepha... [more]
RRF_CLONN 4.572e-37 50.35 Ribosome-recycling factor OS=Clostridium novyi (st... [more]
RRF_CLOD6 4.572e-37 51.05 Ribosome-recycling factor OS=Clostridium difficile... [more]
RRF_STRSY 5.972e-37 52.45 Ribosome-recycling factor OS=Streptococcus suis (s... [more]
RRF_STRS2 5.972e-37 52.45 Ribosome-recycling factor OS=Streptococcus suis (s... [more]
RRF_LACLS 5.972e-37 48.95 Ribosome-recycling factor OS=Lactococcus lactis su... [more]
RRF_DESRM 5.972e-37 52.41 Ribosome-recycling factor OS=Desulfotomaculum redu... [more]
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