CF832535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CLOBA (Ribosome-recycling factor OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=frr PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 8.623e-36 Identity = 75/143 (52.45%), Postives = 101/143 (70.63%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +NP+MLDKI+++YYGS L A I++P+ L+I P++K LK IEKAI+ SDLG+ P+NDG +IRL +P+LT E RK+L K V K EE KVA+R+IRRDA + L+K+ LSED VK D+QK TD +K+ID I Sbjct: 32 ANPSMLDKIQIDYYGSMCPLSQAANISSPEPRVLMITPWEKQLLKEIEKAILKSDLGLNPSNDGSIIRLVIPELTEETRKDLVKKVKKTGEESKVAIRSIRRDANDKIKALKKDGDLSEDQVKKGEDDVQKKTDAIIKEIDKI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STRSV (Ribosome-recycling factor OS=Streptococcus sanguinis (strain SK36) GN=frr PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.126e-35 Identity = 72/143 (50.35%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N ++LD+I VEYYG L IA I P++ LL+ P+DKSS+K IE+A+ +SDLG+TP +DG VIRL +P LT E R++L+K V K E KVA+RNIRRDA+ +K +K K+++ED +K L D+QK+TD+ +K ID + Sbjct: 32 ANASLLDRIHVEYYGVETPLNQIASITIPEARVLLVTPFDKSSIKDIERALNASDLGITPASDGSVIRLVIPALTEETRRDLAKEVKKVGENAKVAIRNIRRDAMDEAKKQEKAKEITEDELKTLEKDIQKVTDDAVKHIDEM 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LACJO (Ribosome-recycling factor OS=Lactobacillus johnsonii GN=frr PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.126e-35 Identity = 69/146 (47.26%), Postives = 106/146 (72.60%), Query Frame = -2 Query: 213 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 650 +N ++LD I+V YYG P L ++ ++ P++ L++ PYDKS+L IE AI++SDLG+TP NDG VIR+ +PQLT ERR+E++K V K AE+GK+AVRN+RRDA+ ++ +K+ ++ED + L +QK+TD+ K+ID + Q Sbjct: 32 ANASLLDGIKVNYYGVPTPLTQMSSVSIPEARVLMVTPYDKSTLDDIEHAILASDLGITPANDGTVIRIVIPQLTGERRQEIAKQVGKLAEKGKIAVRNVRRDAMDTLKRQEKDGDITEDEQRSLEKQVQKVTDDATKEIDKLADQ 177
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_EXIS2 (Ribosome-recycling factor OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=frr PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.126e-35 Identity = 70/141 (49.65%), Postives = 105/141 (74.47%), Query Frame = -2 Query: 228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650 +N ++LD ++V+YYGSP L +A +NTP++ +LI P+DKS + IEKAI +DLG+ P++DG VIRL +P LT +RRKEL K+V K EEGKVA+RNIRRD + +K +K+ L+ED+++ + D+Q LTD+++K +D Sbjct: 32 ANVSILDPVQVDYYGSPTPLNQVANVNTPEARLILITPWDKSMVTEIEKAIQRADLGLAPSSDGTVIRLAIPPLTEDRRKELVKLVKKYTEEGKVALRNIRRDTNEQLKKQEKDGVLTEDDLRGYTEDVQTLTDKFVKVLD 172
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LACGA (Ribosome-recycling factor OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=frr PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.471e-35 Identity = 69/146 (47.26%), Postives = 106/146 (72.60%), Query Frame = -2 Query: 213 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 650 +N ++L+ I+V+YYG P L ++ ++ P++ L++ PYDKSSL IE AI++SDLG+TP NDG VIR+ +PQLT ERR+E++K V K AE+GK+AVRN+RRDA+ ++ +K ++ED + L +QK+TD+ K+ID + Q Sbjct: 32 ANASLLEGIKVDYYGVPTPLTQMSSVSIPEARVLMVTPYDKSSLDDIEHAILASDLGITPANDGTVIRIVIPQLTGERRQEIAKQVGKLAEKGKIAVRNVRRDAMDTLKRQEKNGDITEDEQRSLEKQVQKVTDDATKEIDKLADQ 177
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LACCB (Ribosome-recycling factor OS=Lactobacillus casei (strain BL23) GN=frr PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.471e-35 Identity = 71/143 (49.65%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N ++L++I VEYYG+P L +A I P+ L + PYDKSSLK+IE A+ +SDLG+ P NDG+VIRL +PQLT ERRKE++K V K +E K+A+RNIRR+ L ++ +K+ ++ED++ L D+QK TD+ K+ID I Sbjct: 32 ANASLLNQITVEYYGAPTPLNQMAAITIPEPRVLQVSPYDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKYSESAKIAIRNIRREGLDKLKRQEKDGDITEDDLHRLEKDMQKATDDATKRIDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LACC3 (Ribosome-recycling factor OS=Lactobacillus casei (strain ATCC 334) GN=frr PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.471e-35 Identity = 71/143 (49.65%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N ++L++I VEYYG+P L +A I P+ L + PYDKSSLK+IE A+ +SDLG+ P NDG+VIRL +PQLT ERRKE++K V K +E K+A+RNIRR+ L ++ +K+ ++ED++ L D+QK TD+ K+ID I Sbjct: 32 ANASLLNQITVEYYGAPTPLNQMAAITIPEPRVLQVSPYDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGKYSESAKIAIRNIRREGLDKLKRQEKDGDITEDDLHRLEKDMQKATDDATKRIDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CLOBB (Ribosome-recycling factor OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=frr PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.471e-35 Identity = 75/143 (52.45%), Postives = 100/143 (69.93%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +NP+MLDKI+++YYGS L A I++P+ L+I P++K LK IEKAI+ SDLG+ P+NDG +IRL +P+LT E RK+L K V K EE KVA+R+IRRDA + L+K+ LSED VK D+QK TD +K ID I Sbjct: 32 ANPSMLDKIQIDYYGSMCPLSQAANISSPEPRVLMITPWEKQLLKEIEKAILKSDLGLNPSNDGSIIRLVIPELTEETRKDLVKKVKKTGEESKVAIRSIRRDANDKIKALKKDGDLSEDQVKKGEDDVQKKTDAIIKDIDKI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CLOPS (Ribosome-recycling factor OS=Clostridium perfringens (strain SM101 / Type A) GN=frr PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.509e-35 Identity = 71/143 (49.65%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +NP MLD+I+VEYYGS L +A +++P+ L+I P++K LK IEKAI+ SDLG+ PNNDG +IRL +P+LT E RK L K V K E+ KVA+R+IR+DA + +KE ++ED +K D+QK+TD+++K+ID+I Sbjct: 32 ANPTMLDRIQVEYYGSMCPLNQVANVSSPEPRLLVITPWEKPMLKEIEKAILKSDLGINPNNDGTIIRLLVPELTEETRKNLVKNVKKVGEQAKVAIRSIRKDANDKVKNFKKEGTITEDEMKKGEDDIQKVTDKFVKEIDTI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CLOPE (Ribosome-recycling factor OS=Clostridium perfringens GN=frr PE=3 SV=2) HSP 1 Score: 148.673 bits (374), Expect = 2.509e-35 Identity = 71/143 (49.65%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +NP MLD+I+VEYYGS L +A +++P+ L+I P++K LK IEKAI+ SDLG+ PNNDG +IRL +P+LT E RK L K V K E+ KVA+R+IR+DA + +KE ++ED +K D+QK+TD+++K+ID+I Sbjct: 32 ANPTMLDRIQVEYYGSMCPLNQVANVSSPEPRLLVITPWEKPMLKEIEKAILKSDLGINPNNDGTIIRLLVPELTEETRKNLVKNVKKVGEQAKVAIRSIRKDANDKVKNFKKEGTITEDEMKKGEDDIQKVTDKFVKEIDTI 174 The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bpback to top |