CF832535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_PROAC (Ribosome-recycling factor OS=Propionibacterium acnes GN=frr PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.245e-34 Identity = 67/145 (46.21%), Postives = 103/145 (71.03%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 +NPAM +K+ VEYYG+P L+ +A P++ ++LI P+DKS + +EKAI SDLG+ P+NDG V+R LP LT ERRKE K+ +AEEG++AVRN+RR + +K +K+K++SED + L +L ++T +Y+++ID + K Sbjct: 31 ANPAMFNKLMVEYYGTPTPLQQLASFQVPEARTVLIAPFDKSCVNDVEKAIRDSDLGVNPSNDGNVVRCVLPALTEERRKEYIKMAKTKAEEGRIAVRNVRRASNDVVKKQEKDKEISEDEMTRLEKELDQVTRKYVEQIDELLK 175
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_VESOH (Ribosome-recycling factor OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=frr PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.124e-34 Identity = 68/141 (48.23%), Postives = 103/141 (73.05%), Query Frame = -2 Query: 228 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 650 ++P++L++I + YYGS V L +A I+T DS +L P++K + IEKAI++SDLG+ P G+VIR+ LP LT ERR EL K++ +AE+ K+A+RNIRRDA +++L KEK++S+D + D+QK+TDEY+KKI+ Sbjct: 32 AHPSLLEQIHINYYGSMVPLSQVANISTEDSRTLKASPWEKDMVSVIEKAIMTSDLGLNPQTIGQVIRIHLPPLTQERRGELVKIIKDEAEKAKIAIRNIRRDANSDFKELLKEKEISKDEARKAEYDIQKITDEYIKKIE 172
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LEGPL (Ribosome-recycling factor OS=Legionella pneumophila (strain Lens) GN=frr PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.124e-34 Identity = 68/143 (47.55%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N ++LD + V+YYGSP L +A I T DS ++L+ P++KS + +IEKAI++SDLG+ P G IR+ +P LT ERRKEL KVV + E+G+V++RNIRRDA ++L KEK +SED+ + + +QKLTD Y+ ++D++ Sbjct: 32 ANASLLDHVMVDYYGSPTPLSQVANITTSDSRTILVTPWEKSMVAAIEKAILNSDLGLNPATAGTAIRVPMPPLTEERRKELIKVVRHEGEQGRVSIRNIRRDANNQLKELVKEKAISEDDERRAAEAIQKLTDRYISEVDAV 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LEGPH (Ribosome-recycling factor OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=frr PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.124e-34 Identity = 68/143 (47.55%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N ++LD + V+YYGSP L +A I T DS ++L+ P++KS + +IEKAI++SDLG+ P G IR+ +P LT ERRKEL KVV + E+G+V++RNIRRDA ++L KEK +SED+ + + +QKLTD Y+ ++D++ Sbjct: 32 ANASLLDHVMVDYYGSPTPLSQVANITTSDSRTILVTPWEKSMVAAIEKAILNSDLGLNPATAGTAIRVPMPPLTEERRKELIKVVRHEGEQGRVSIRNIRRDANNQLKELVKEKAISEDDERRAAEAIQKLTDRYISEVDAV 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LEGPC (Ribosome-recycling factor OS=Legionella pneumophila (strain Corby) GN=frr PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.124e-34 Identity = 68/143 (47.55%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N ++LD + V+YYGSP L +A I T DS ++L+ P++KS + +IEKAI++SDLG+ P G IR+ +P LT ERRKEL KVV + E+G+V++RNIRRDA ++L KEK +SED+ + + +QKLTD Y+ ++D++ Sbjct: 32 ANASLLDHVMVDYYGSPTPLSQVANITTSDSRTILVTPWEKSMVAAIEKAILNSDLGLNPATAGTAIRVPMPPLTEERRKELIKVVRHEGEQGRVSIRNIRRDANNQLKELVKEKAISEDDERRAAEAIQKLTDRYISEVDAV 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LEGPA (Ribosome-recycling factor OS=Legionella pneumophila (strain Paris) GN=frr PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.124e-34 Identity = 68/143 (47.55%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N ++LD + V+YYGSP L +A I T DS ++L+ P++KS + +IEKAI++SDLG+ P G IR+ +P LT ERRKEL KVV + E+G+V++RNIRRDA ++L KEK +SED+ + + +QKLTD Y+ ++D++ Sbjct: 32 ANASLLDHVMVDYYGSPTPLSQVANITTSDSRTILVTPWEKSMVAAIEKAILNSDLGLNPATAGTAIRVPMPPLTEERRKELIKVVRHEGEQGRVSIRNIRRDANNQLKELVKEKAISEDDERRAAEAIQKLTDRYISEVDAV 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_KOSOT (Ribosome-recycling factor OS=Kosmotoga olearia (strain TBF 19.5.1) GN=frr PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.774e-34 Identity = 65/145 (44.83%), Postives = 112/145 (77.24%), Query Frame = -2 Query: 213 NPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 647 +PA+L++I+V+YYG P + +A IN + SL+I+P++K+ L IEKAI++S+LG+TP NDG V+RL P T+E+R++ K+ + AE+GK+AVRNIRRD LK ++++K K+++ED+++ +LQKLTD+Y++++D ++++ Sbjct: 33 SPAILEEIKVDYYGVPTPINQLATINVSEDRSLIIRPWEKNMLSHIEKAILASNLGLTPINDGNVVRLNFPIPTTEQREKWVKLSKEIAEKGKIAVRNIRRDVLKEAKEMEKNKEMTEDDLRRFEEELQKLTDKYVEEMDKLFEK 177
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_GEOSL (Ribosome-recycling factor OS=Geobacter sulfurreducens GN=frr PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.774e-34 Identity = 64/143 (44.76%), Postives = 106/143 (74.13%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N +LD+I V++YG+P L +A + P+ ++ IQP++ + IEKAI++++LG TP+NDG++IR++LP LT ERRKE+ K + K AE+ K+A+RNIRRDA+ +KL+K+KK+SED++K ++Q +T+ Y+ K+D + Sbjct: 32 ANTGLLDEIRVDFYGNPSPLNQVATLAVPEPRTITIQPWETKMIPVIEKAILNANLGFTPSNDGKLIRISLPPLTEERRKEIVKSLKKTAEDAKIAIRNIRRDAIDGLKKLEKDKKISEDDLKRAEKEVQDVTNVYVAKVDEV 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_PARD8 (Ribosome-recycling factor OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=frr PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.623e-34 Identity = 66/144 (45.83%), Postives = 105/144 (72.92%), Query Frame = -2 Query: 219 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIY 650 +NP +LD ++V YYG+PV L ++A + PD+ +++I P++K ++ IEK I+ S+LG+TP N+GEVIRL +P LT ERR++L K ++AE K++VRN RRDA++A +K K + ED KD +++QK+ D+++KKID +Y Sbjct: 34 ANPKILDCVKVMYYGAPVPLTNVATVTVPDARTIMITPWEKKIIRDIEKGILDSELGITPENNGEVIRLGIPPLTEERRRQLVKQCKQEAENAKISVRNARRDAIEALKKSIKSDGVPEDVEKDAEAEVQKIHDKFIKKIDELY 177
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LACPL (Ribosome-recycling factor OS=Lactobacillus plantarum GN=frr PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.623e-34 Identity = 69/143 (48.25%), Postives = 101/143 (70.63%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N ++L++I +YYG+ L +A I P+ L++ P+DKS+LK IEKAI++SDLG++P NDG IRL +PQLT ERRKEL+K V + E KVAVRN+RRDA++A +K K+ + ++D + L QKLTD+ K +D+I Sbjct: 34 ANASLLNRISADYYGAQTPLNQMAAITVPEPRVLMVTPFDKSALKEIEKAILASDLGISPANDGSAIRLVIPQLTEERRKELAKDVKAEGERAKVAVRNVRRDAMEALKKGHKDGQFTDDQLHQLEDQAQKLTDQAGKDVDAI 176 The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bpback to top |