CF832535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CLOTH (Ribosome-recycling factor OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=frr PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.623e-34 Identity = 66/143 (46.15%), Postives = 100/143 (69.93%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N A+LD+I V+YYG P + + I+ P+ ++IQP+D LK IEK I SD+G+ PNNDG+VIRL P LT ERRKEL+K+ K E+ KVA+R+IRRD ++ + ++K +++ED++K D+Q LTD+Y+ +ID + Sbjct: 30 ANAAILDRITVDYYGVPTPINQLGTISVPEPRVIVIQPWDAQILKEIEKEIQKSDIGINPNNDGKVIRLVFPPLTEERRKELTKLAKKYGEDAKVAIRSIRRDGIEKKKAMKKNGEITEDDLKSAEKDIQNLTDKYIAEIDKL 172
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CLOB8 (Ribosome-recycling factor OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=frr PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.623e-34 Identity = 72/143 (50.35%), Postives = 99/143 (69.23%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +NP MLD+I VEYYGS L +A ++ P+ L+I P++K LK IEKAI+ SDLG+ P++DG +IRL +P+LT E RK L K V K EE KVA+R+IR+ A + L+K++ LSED VK ++QK TD +K+IDSI Sbjct: 32 ANPTMLDRIHVEYYGSMCPLSQVANVSAPEPRVLMITPWEKPLLKEIEKAILKSDLGLNPSSDGSIIRLVIPELTEETRKTLVKNVKKTGEEAKVAIRSIRKTANDKIKALKKDEDLSEDQVKKAEDEVQKKTDAVVKEIDSI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SHESW (Ribosome-recycling factor OS=Shewanella sp. (strain W3-18-1) GN=frr PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.732e-34 Identity = 65/143 (45.45%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD I+V YYG+ L +A + DS +L + +D+S+++++EKAI+SSDLG+ P + G +R+ LP LT ERRK+ KVV +AE G+VA+RN+RRDA+ +KL+K K+ +ED+V+ D+QK TD ++KK+D I Sbjct: 32 AHPSLLDSIQVSYYGTMTPLNQVANVGVEDSRTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRVAIRNVRRDAISEVKKLEKAKECTEDDVRRFEDDVQKFTDAHIKKVDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SHEPC (Ribosome-recycling factor OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=frr PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.732e-34 Identity = 65/143 (45.45%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD I+V YYG+ L +A + DS +L + +D+S+++++EKAI+SSDLG+ P + G +R+ LP LT ERRK+ KVV +AE G+VA+RN+RRDA+ +KL+K K+ +ED+V+ D+QK TD ++KK+D I Sbjct: 32 AHPSLLDSIQVSYYGTMTPLNQVANVGVEDSRTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRVAIRNVRRDAISEVKKLEKAKECTEDDVRRFEDDVQKFTDAHIKKVDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_OCEIH (Ribosome-recycling factor OS=Oceanobacillus iheyensis GN=frr PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.732e-34 Identity = 66/145 (45.52%), Postives = 101/145 (69.66%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 +NP++LD + V+YYG+ L +A + P++ L I PYDKS++ IEKAI +DLG++P++DG +IR+ +P LT ERRK+L KVV K +EE KV +RNIRRD +K++K L+ED+++ D+Q T++Y+ KID + K Sbjct: 32 ANPSILDSVFVDYYGASTPLNQLASVGAPEARLLTITPYDKSAIGDIEKAIQKADLGLSPSSDGNIIRINIPALTQERRKDLVKVVGKYSEEAKVQIRNIRRDTNDQLKKMEKNGDLTEDDLRGFQDDVQTSTNDYINKIDQLAK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_DESAA (Ribosome-recycling factor OS=Desulfatibacillum alkenivorans (strain AK-01) GN=frr PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.732e-34 Identity = 65/143 (45.45%), Postives = 104/143 (72.73%), Query Frame = -2 Query: 213 AMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 641 +MLD ++++YYG+P + A + P+S + IQP+D S +K IEKAI+ SDLG+ P+NDG++IR+ +P LT +RRKE+ K+V K +EEGK++VRNIRRDA + + ++K+ ++ED ++QK+TD+++KK+D I Q Sbjct: 35 SMLDGVKLDYYGTPTPINQAATVAIPESRLITIQPWDASVIKDIEKAILKSDLGLNPSNDGKIIRIAIPPLTEDRRKEMVKLVNKMSEEGKISVRNIRRDANETIKSMKKDGDIAEDLAFKGQDEVQKITDDFVKKVDDICAQ 177
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CORJK (Ribosome-recycling factor OS=Corynebacterium jeikeium (strain K411) GN=frr PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.732e-34 Identity = 64/143 (44.76%), Postives = 102/143 (71.33%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +NP+M + + EYYG P + +A I+ P+ LLI+PY++S++ +IE AI +SDLG+ P NDG+V+R+T+PQLT ERRKE+ KV + E+ K+A+RNIRR ++ K+QK+ + ED V+ DL+K+T Y++++DS+ Sbjct: 32 ANPSMFNGVVAEYYGVPTPITQMATISVPEPRMLLIKPYEQSTMDAIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKEMVKVAKSKGEDAKIAIRNIRRKGMEQLGKIQKDGEAGEDEVRAAEKDLEKITHSYVEQVDSL 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_ACIC1 (Ribosome-recycling factor OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=frr PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.732e-34 Identity = 69/145 (47.59%), Postives = 99/145 (68.28%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 +NPA+ KI VEYYG+P L +A D+ ++I PYDK SL++IEKAI SDLG+ P +DG VIR+ +P LT ERR++ K+ +AEE +VA+RNIRR A A +KLQK+ ++ ED+V+ +L +LT +Y+ ID + K Sbjct: 32 ANPALFSKITVEYYGTPTPLNQLASFTVADARLIVIHPYDKGSLRAIEKAIRDSDLGVNPTDDGSVIRVAIPPLTEERRRDYIKMARHEAEEARVAIRNIRRHAKDALDKLQKDGEVGEDDVRRAEKELDELTHKYVAHIDEMLK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_PORG3 (Ribosome-recycling factor OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=frr PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.180e-34 Identity = 69/146 (47.26%), Postives = 102/146 (69.86%), Query Frame = -2 Query: 213 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 650 ++P +LD I V YYG+ L +A INTPD+ ++++ P+++S +K IEKAI+ S LG+TP N+GE+IRL LP LT ERR++L K + AE+ KV+VRN RRDA+ A +K K ED KD +++QK+ D Y+KKID ++ + Sbjct: 33 ASPKLLDGIMVMYYGNATPLTQVASINTPDAKTIVVTPWERSLIKDIEKAIMDSPLGITPENNGELIRLGLPPLTEERRRQLVKQIKGDAEDAKVSVRNARRDAIDAIKKSVKTDGTPEDVAKDAEAEMQKVHDRYIKKIDELFAE 178
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_PASMU (Ribosome-recycling factor OS=Pasteurella multocida GN=frr PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 8.071e-34 Identity = 64/143 (44.76%), Postives = 104/143 (72.73%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 + P++LD I+VEYYGSP L+ +A + D+ +L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V +AE+GK+AVRN+RRDA + L K+K++SED + ++QK+TD ++KK+D + Sbjct: 32 AQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEAEQGKIAVRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDTFVKKVDEV 174 The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bpback to top |