CF832535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SHEB2 (Ribosome-recycling factor OS=Shewanella baltica (strain OS223) GN=frr PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.798e-33 Identity = 64/143 (44.76%), Postives = 102/143 (71.33%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD I+V YYG+ L +A + DS +L + +D+S+++++EKAI+SSDLG+ P + G +R+ LP LT ERRK+ KVV +AE G++A+RN+RRDA+ +KL+K K +ED+V+ ++QK TD ++KKID I Sbjct: 32 AHPSLLDSIQVSYYGTMTPLNQVANVGVEDSRTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRNEAENGRIAIRNVRRDAISEVKKLEKAKACTEDDVRRSEEEVQKFTDAHIKKIDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_PSEA6 (Ribosome-recycling factor OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=frr PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.798e-33 Identity = 71/143 (49.65%), Postives = 103/143 (72.03%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD I V YYG+P LK +A + DS +L + +DKS+ +++EKAI+ SDLG+ P + G VIR+ +P LT ERRK+L +VV +AE G+VAVRNIRRDA ++L KEK++SED+ +QKLTDE++K+ID I Sbjct: 32 AHPSLLDSIMVPYYGAPTPLKQLANVIAEDSRTLALTVFDKSAAQAVEKAIMQSDLGLNPMSAGTVIRIPMPALTEERRKDLIRVVRNEAEGGRVAVRNIRRDANGDIKELLKEKEISEDDAHRGEDAIQKLTDEFVKQIDDI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_HAEPS (Ribosome-recycling factor OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=frr PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.798e-33 Identity = 65/143 (45.45%), Postives = 104/143 (72.73%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 + P++LD I+VEYYGS L+ +A + D+ +L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V + E+GKV++RNIRRDA + L+KEK++SE++ + D+QK+TD Y+KK+D I Sbjct: 32 AQPSLLDAIQVEYYGSATPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKVSIRNIRRDANDKIKTLEKEKQISENDERKAQDDIQKITDIYIKKVDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_BORPE (Ribosome-recycling factor OS=Bordetella pertussis GN=frr PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.798e-33 Identity = 69/146 (47.26%), Postives = 103/146 (70.55%), Query Frame = -2 Query: 213 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 650 ++ +LD ++VEYYGSPV + +A +N D+ ++ +QPY+KS IEKAI SDLG+ P + GE IR+ +P LT ERR++L+KVV + E+ KVAVRN+RR+A +A +KL K+K++SED+ + D+QKLTD + ID + Q Sbjct: 33 AHTGILDHVQVEYYGSPVPISQVANVNLVDARTISVQPYEKSMAGPIEKAIRESDLGLNPVSMGETIRVPMPALTEERRRDLTKVVKSEGEDAKVAVRNLRREANEALKKLVKDKEISEDDERRAQDDVQKLTDRAVGDIDKMIVQ 178
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_BORPA (Ribosome-recycling factor OS=Bordetella parapertussis GN=frr PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.798e-33 Identity = 69/146 (47.26%), Postives = 103/146 (70.55%), Query Frame = -2 Query: 213 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 650 ++ +LD ++VEYYGSPV + +A +N D+ ++ +QPY+KS IEKAI SDLG+ P + GE IR+ +P LT ERR++L+KVV + E+ KVAVRN+RR+A +A +KL K+K++SED+ + D+QKLTD + ID + Q Sbjct: 33 AHTGILDHVQVEYYGSPVPISQVANVNLVDARTISVQPYEKSMAGPIEKAIRESDLGLNPVSMGETIRVPMPALTEERRRDLTKVVKSEGEDAKVAVRNLRREANEALKKLVKDKEISEDDERRAQDDVQKLTDRAVGDIDKMIVQ 178
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_BORBR (Ribosome-recycling factor OS=Bordetella bronchiseptica GN=frr PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.798e-33 Identity = 69/146 (47.26%), Postives = 103/146 (70.55%), Query Frame = -2 Query: 213 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 650 ++ +LD ++VEYYGSPV + +A +N D+ ++ +QPY+KS IEKAI SDLG+ P + GE IR+ +P LT ERR++L+KVV + E+ KVAVRN+RR+A +A +KL K+K++SED+ + D+QKLTD + ID + Q Sbjct: 33 AHTGILDHVQVEYYGSPVPISQVANVNLVDARTISVQPYEKSMAGPIEKAIRESDLGLNPVSMGETIRVPMPALTEERRRDLTKVVKSEGEDAKVAVRNLRREANEALKKLVKDKEISEDDERRAQDDVQKLTDRAVGDIDKMIVQ 178
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SHEB9 (Ribosome-recycling factor OS=Shewanella baltica (strain OS195) GN=frr PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.348e-33 Identity = 63/143 (44.06%), Postives = 102/143 (71.33%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD I+V YYG+ L +A + DS +L + +D+S+++++EKAI+SSDLG+ P + G +R+ LP LT ERRK+ KVV +AE G++A+RN+RRDA+ +KL+K K +ED+V+ ++QK TD ++KK+D I Sbjct: 32 AHPSLLDSIQVSYYGTMTPLNQVANVGVEDSRTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRNEAENGRIAIRNVRRDAISEVKKLEKAKACTEDDVRRSEEEVQKFTDAHIKKVDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SHEB8 (Ribosome-recycling factor OS=Shewanella baltica (strain OS185) GN=frr PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.348e-33 Identity = 63/143 (44.06%), Postives = 102/143 (71.33%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD I+V YYG+ L +A + DS +L + +D+S+++++EKAI+SSDLG+ P + G +R+ LP LT ERRK+ KVV +AE G++A+RN+RRDA+ +KL+K K +ED+V+ ++QK TD ++KK+D I Sbjct: 32 AHPSLLDSIQVSYYGTMTPLNQVANVGVEDSRTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRNEAENGRIAIRNVRRDAISEVKKLEKAKACTEDDVRRSEEEVQKFTDAHIKKVDEI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LEPBP (Ribosome-recycling factor OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=frr PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.348e-33 Identity = 70/146 (47.95%), Postives = 101/146 (69.18%), Query Frame = -2 Query: 213 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 650 +NP M++ + V+YYG+ L + +I P+ +LI P++K LK IEKAI ++ LG+TPNNDG IR+ +P+LT ERRKEL+KVV ++AEE KVA+RNIRRDA +K Q E +S+D VK +QK+TD Y+ K+ + K+ Sbjct: 32 ANPMMVEDVRVDYYGTLTPLNQLGKIACPEPRVILITPFEKGMLKDIEKAIFAASLGLTPNNDGSSIRINIPELTGERRKELAKVVKQKAEEKKVAIRNIRRDANDELKKHQSE--MSQDEVKGHQDKIQKITDSYIAKLGDLEKE 175
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_LEPBA (Ribosome-recycling factor OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=frr PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.348e-33 Identity = 70/146 (47.95%), Postives = 101/146 (69.18%), Query Frame = -2 Query: 213 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 650 +NP M++ + V+YYG+ L + +I P+ +LI P++K LK IEKAI ++ LG+TPNNDG IR+ +P+LT ERRKEL+KVV ++AEE KVA+RNIRRDA +K Q E +S+D VK +QK+TD Y+ K+ + K+ Sbjct: 32 ANPMMVEDVRVDYYGTLTPLNQLGKIACPEPRVILITPFEKGMLKDIEKAIFAASLGLTPNNDGSSIRINIPELTGERRKELAKVVKQKAEEKKVAIRNIRRDANDELKKHQSE--MSQDEVKGHQDKIQKITDSYIAKLGDLEKE 175 The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bpback to top |