CF832535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_MYCS2 (Ribosome-recycling factor OS=Mycobacterium smegmatis GN=frr PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.866e-32 Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 +NP M ++I ++YYGS + +A IN P++ ++I+PY+ S L++IE AI +SDLG+ P+NDG +IR+ +PQLT ERR+EL K + E+ KV+VRNIRR A++ +++K+ + ED V DL K T Y +ID + K Sbjct: 32 ANPGMFNRINIDYYGSMTPITQLASINVPEARLVVIKPYEASQLRAIEDAIRNSDLGVNPSNDGNIIRVAIPQLTEERRRELVKQAKSKGEDAKVSVRNIRRKAMEELSRIKKDGEAGEDEVSRAEKDLDKSTHTYTAQIDELVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_DEIGD (Ribosome-recycling factor OS=Deinococcus geothermalis (strain DSM 11300) GN=frr PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.866e-32 Identity = 64/144 (44.44%), Postives = 102/144 (70.83%), Query Frame = -2 Query: 219 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIY 650 +NP +L K+ VEYYGS + + +A I TPD+ +L+I P+D+ +L IEKAI SDLG+ PNN G+ I ++LP LT ERRK+L K AEE +VA+R+IR+ AL ++++K + + +D +K +++QK+TDEY+K+++ + Sbjct: 34 ANPGILKKVMVEYYGSSMPIDQVASITTPDARTLVITPWDRGALNPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKNYAEEARVAIRSIRKHAL---DEVKKVEGVGDDEIKRAEAEVQKITDEYIKRVEDTF 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CORGB (Ribosome-recycling factor OS=Corynebacterium glutamicum (strain R) GN=frr PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.866e-32 Identity = 62/143 (43.36%), Postives = 98/143 (68.53%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +NPAM + + EYYG P + ++ I+ P+ LLI+PY+ SS++ IE AI +SDLG+ P NDG+V+R+T+PQLT ERRK++ K+ + E+GK+A+RNIRR + +KLQK+ ED V+ +L K+T ++ ++D + Sbjct: 32 ANPAMFNGVMAEYYGVPTPITQMSSISVPEPRMLLIKPYEMSSMQVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDMVKLAKGKGEDGKIAIRNIRRKGMDQLKKLQKDGDAGEDEVQAAEKELDKVTAGFVAQVDEV 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_THICR (Ribosome-recycling factor OS=Thiomicrospira crunogena (strain XCL-2) GN=frr PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.289e-31 Identity = 58/143 (40.56%), Postives = 102/143 (71.33%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++LD ++V+YYGS V + +A +N D+ +L +QP+++S + +EKAI++SD+G+ P G V+R+ +P LT ERRKE K+ +AE+ KVA+RNIRRDA ++ L K+K++++D ++ +QK TDE++ ++D + Sbjct: 32 AHPSILDAVKVDYYGSEVPVSQVANVNVEDARTLTVQPWEQSMVSVVEKAIMTSDIGVNPVTTGNVMRIPMPPLTEERRKEFIKLAKSEAEQTKVAIRNIRRDANADFKNLNKDKEITDDELRQAEEQIQKATDEHVSQVDQM 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STAAW (Ribosome-recycling factor OS=Staphylococcus aureus (strain MW2) GN=frr PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.289e-31 Identity = 66/143 (46.15%), Postives = 100/143 (69.93%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N +L+ + V+YYG+P ++ +A IN P++ L+I PYDK+S+ IEKAI++++LG+ P +DGEVIR+ +P LT ERRKE K V K EE KV+VRNIRRD +K +K ++ED ++ + D+QK TD +K+ID + Sbjct: 31 ANSNLLNGVTVDYYGAPTPVQQLASINVPEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQM 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STAAU (Ribosome-recycling factor OS=Staphylococcus aureus GN=frr PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.289e-31 Identity = 66/143 (46.15%), Postives = 100/143 (69.93%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N +L+ + V+YYG+P ++ +A IN P++ L+I PYDK+S+ IEKAI++++LG+ P +DGEVIR+ +P LT ERRKE K V K EE KV+VRNIRRD +K +K ++ED ++ + D+QK TD +K+ID + Sbjct: 31 ANSNLLNGVTVDYYGAPTPVQQLASINVPEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQM 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STAAS (Ribosome-recycling factor OS=Staphylococcus aureus (strain MSSA476) GN=frr PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.289e-31 Identity = 66/143 (46.15%), Postives = 100/143 (69.93%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N +L+ + V+YYG+P ++ +A IN P++ L+I PYDK+S+ IEKAI++++LG+ P +DGEVIR+ +P LT ERRKE K V K EE KV+VRNIRRD +K +K ++ED ++ + D+QK TD +K+ID + Sbjct: 31 ANSNLLNGVTVDYYGAPTPVQQLASINVPEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQM 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STAAR (Ribosome-recycling factor OS=Staphylococcus aureus (strain MRSA252) GN=frr PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.289e-31 Identity = 66/143 (46.15%), Postives = 100/143 (69.93%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N +L+ + V+YYG+P ++ +A IN P++ L+I PYDK+S+ IEKAI++++LG+ P +DGEVIR+ +P LT ERRKE K V K EE KV+VRNIRRD +K +K ++ED ++ + D+QK TD +K+ID + Sbjct: 31 ANSNLLNGVTVDYYGAPTPVQQLASINVPEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQM 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STAAN (Ribosome-recycling factor OS=Staphylococcus aureus (strain N315) GN=frr PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.289e-31 Identity = 66/143 (46.15%), Postives = 100/143 (69.93%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N +L+ + V+YYG+P ++ +A IN P++ L+I PYDK+S+ IEKAI++++LG+ P +DGEVIR+ +P LT ERRKE K V K EE KV+VRNIRRD +K +K ++ED ++ + D+QK TD +K+ID + Sbjct: 31 ANSNLLNGVTVDYYGAPTPVQQLASINVPEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQM 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_STAAM (Ribosome-recycling factor OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=frr PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.289e-31 Identity = 66/143 (46.15%), Postives = 100/143 (69.93%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +N +L+ + V+YYG+P ++ +A IN P++ L+I PYDK+S+ IEKAI++++LG+ P +DGEVIR+ +P LT ERRKE K V K EE KV+VRNIRRD +K +K ++ED ++ + D+QK TD +K+ID + Sbjct: 31 ANSNLLNGVTVDYYGAPTPVQQLASINVPEARLLVISPYDKTSVADIEKAIIAANLGVNPTSDGEVIRIAVPALTEERRKERVKDVKKIGEEAKVSVRNIRRDMNDQLKKDEKNGDITEDELRSGTEDVQKATDNSIKEIDQM 173 The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bpback to top |