CF832535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SALCH (Ribosome-recycling factor OS=Salmonella choleraesuis GN=frr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31 Identity = 65/142 (45.77%), Postives = 102/142 (71.83%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SALAR (Ribosome-recycling factor OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=frr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31 Identity = 65/142 (45.77%), Postives = 102/142 (71.83%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_SALA4 (Ribosome-recycling factor OS=Salmonella agona (strain SL483) GN=frr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31 Identity = 65/142 (45.77%), Postives = 102/142 (71.83%), Query Frame = -2 Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650 ++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_RHOBA (Ribosome-recycling factor OS=Rhodopirellula baltica GN=frr PE=3 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31 Identity = 65/133 (48.87%), Postives = 94/133 (70.68%), Query Frame = -2 Query: 252 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLT 650 +NP ++D I+VE YGS LK +A I TP+ +LI+PYD +++K IEKAIV+ DLG+ P NDG VIRL +P L+ E RK++ + + AEE KV++RNIRRDA KA E +K+K+++ED+ +Q+LT Sbjct: 33 ANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQILIRPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAKVSIRNIRRDANKAAETAEKDKEMTEDDRDKTKDQVQELT 165
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_RALME (Ribosome-recycling factor OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=frr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31 Identity = 62/143 (43.36%), Postives = 104/143 (72.73%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++ +LD ++V+YYGS V + +A ++ D+ ++ +QP++K ++++EKAI DLG+ P G+VIR+ +P LT ERR+EL+KVV +AE KVAVRN+RRDA + ++KL K+K +SED+ + ++QKLTD+++ +ID + Sbjct: 33 AHTGLLDHVQVDYYGSMVPISQVAAVSLADARTISVQPWEKKMVQAVEKAIRDGDLGLNPATMGDVIRVPMPPLTEERRRELTKVVKGEAEGAKVAVRNLRRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDKFVAEIDKL 175
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_MYCBT (Ribosome-recycling factor OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=frr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31 Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 +NP M +I ++YYG+ + +A IN P++ ++I+PY+ + L++IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL K + EE KV+VRNIRR A++ +++KE + ED V DL K T +Y+ +ID + K Sbjct: 32 ANPGMFSRITIDYYGAATLITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_MYCBP (Ribosome-recycling factor OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=frr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31 Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 +NP M +I ++YYG+ + +A IN P++ ++I+PY+ + L++IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL K + EE KV+VRNIRR A++ +++KE + ED V DL K T +Y+ +ID + K Sbjct: 32 ANPGMFSRITIDYYGAATLITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_HELAH (Ribosome-recycling factor OS=Helicobacter acinonychis (strain Sheeba) GN=frr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31 Identity = 64/141 (45.39%), Postives = 99/141 (70.21%), Query Frame = -2 Query: 216 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 638 +LD I+V+YYG+P +L + + + D+++L I P++K+ LK IE+AI +++G+ PNNDGE I+L P +T+E+RK ++K E+ KVAVRNIR+DA +KL+K+K++SED K +QK+TDE +KKID K Sbjct: 36 ILDHIKVDYYGTPTALNQVGSVMSLDATTLQISPWEKNLLKEIERAIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVRNIRQDANNKVKKLEKDKEISEDESKKAQEQVQKITDEAIKKIDESVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_BIFAA (Ribosome-recycling factor OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=frr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31 Identity = 65/143 (45.45%), Postives = 97/143 (67.83%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 +NPA+L+ I V+YYG+P LK++A I P+ +L + P+D S ++EKA+ SDLG +P DG VIRLT+P+LT ERRKE K+ +AE+GKVAVRNIRR A ++ +K K+ + ED L +L K+T + ++D++ Sbjct: 31 ANPALLNGITVDYYGAPTPLKAVATIGVPEPRTLAVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKIAKGKAEDGKVAVRNIRRKAKESLDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDAL 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_BAUCH (Ribosome-recycling factor OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=frr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31 Identity = 65/146 (44.52%), Postives = 103/146 (70.55%), Query Frame = -2 Query: 213 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 650 +NP +LD I+V+YYGS + L+ +A I D+ +L+I +D+S +K +EKAI+ SDLG+TP+ G +IR+ LP LT ERR+ L K+V +AE+GK++VRNIRRDA + L K K +S D + S++QK+T+ +++++D I + Sbjct: 32 ANPNLLDNIKVDYYGSIMPLRQLANIIVEDTRTLVITLFDQSIIKRVEKAIIISDLGLTPDLSGTIIRVQLPSLTEERRRNLIKIVRNEAEQGKISVRNIRRDANDHIKILLKNKAISIDEERRSQSEIQKITEAWIRRLDQILSE 177 The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bpback to top |