Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_SALCH (Ribosome-recycling factor OS=Salmonella choleraesuis GN=frr PE=3 SV=1)
HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 65/142 (45.77%), Postives = 102/142 (71.83%), Query Frame = -2
Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650
++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+
Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_SALAR (Ribosome-recycling factor OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=frr PE=3 SV=1)
HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 65/142 (45.77%), Postives = 102/142 (71.83%), Query Frame = -2
Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650
++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+
Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_SALA4 (Ribosome-recycling factor OS=Salmonella agona (strain SL483) GN=frr PE=3 SV=1)
HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 65/142 (45.77%), Postives = 102/142 (71.83%), Query Frame = -2
Query: 225 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 650
++P++LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+
Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_RHOBA (Ribosome-recycling factor OS=Rhodopirellula baltica GN=frr PE=3 SV=2)
HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 65/133 (48.87%), Postives = 94/133 (70.68%), Query Frame = -2
Query: 252 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLT 650
+NP ++D I+VE YGS LK +A I TP+ +LI+PYD +++K IEKAIV+ DLG+ P NDG VIRL +P L+ E RK++ + + AEE KV++RNIRRDA KA E +K+K+++ED+ +Q+LT
Sbjct: 33 ANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQILIRPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAKVSIRNIRRDANKAAETAEKDKEMTEDDRDKTKDQVQELT 165
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_RALME (Ribosome-recycling factor OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=frr PE=3 SV=1)
HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 62/143 (43.36%), Postives = 104/143 (72.73%), Query Frame = -2
Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650
++ +LD ++V+YYGS V + +A ++ D+ ++ +QP++K ++++EKAI DLG+ P G+VIR+ +P LT ERR+EL+KVV +AE KVAVRN+RRDA + ++KL K+K +SED+ + ++QKLTD+++ +ID +
Sbjct: 33 AHTGLLDHVQVDYYGSMVPISQVAAVSLADARTISVQPWEKKMVQAVEKAIRDGDLGLNPATMGDVIRVPMPPLTEERRRELTKVVKGEAEGAKVAVRNLRRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDKFVAEIDKL 175
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_MYCBT (Ribosome-recycling factor OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=frr PE=3 SV=1)
HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = -2
Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650
+NP M +I ++YYG+ + +A IN P++ ++I+PY+ + L++IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL K + EE KV+VRNIRR A++ +++KE + ED V DL K T +Y+ +ID + K
Sbjct: 32 ANPGMFSRITIDYYGAATLITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_MYCBP (Ribosome-recycling factor OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=frr PE=3 SV=1)
HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = -2
Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650
+NP M +I ++YYG+ + +A IN P++ ++I+PY+ + L++IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL K + EE KV+VRNIRR A++ +++KE + ED V DL K T +Y+ +ID + K
Sbjct: 32 ANPGMFSRITIDYYGAATLITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_HELAH (Ribosome-recycling factor OS=Helicobacter acinonychis (strain Sheeba) GN=frr PE=3 SV=1)
HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 64/141 (45.39%), Postives = 99/141 (70.21%), Query Frame = -2
Query: 216 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 638
+LD I+V+YYG+P +L + + + D+++L I P++K+ LK IE+AI +++G+ PNNDGE I+L P +T+E+RK ++K E+ KVAVRNIR+DA +KL+K+K++SED K +QK+TDE +KKID K
Sbjct: 36 ILDHIKVDYYGTPTALNQVGSVMSLDATTLQISPWEKNLLKEIERAIQEANIGVNPNNDGETIKLFFPPMTTEQRKLIAKDAKAMGEKAKVAVRNIRQDANNKVKKLEKDKEISEDESKKAQEQVQKITDEAIKKIDESVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_BIFAA (Ribosome-recycling factor OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=frr PE=3 SV=1)
HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 65/143 (45.45%), Postives = 97/143 (67.83%), Query Frame = -2
Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650
+NPA+L+ I V+YYG+P LK++A I P+ +L + P+D S ++EKA+ SDLG +P DG VIRLT+P+LT ERRKE K+ +AE+GKVAVRNIRR A ++ +K K+ + ED L +L K+T + ++D++
Sbjct: 31 ANPALLNGITVDYYGAPTPLKAVATIGVPEPRTLAVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKIAKGKAEDGKVAVRNIRRKAKESLDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDAL 173
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match:
RRF_BAUCH (Ribosome-recycling factor OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=frr PE=3 SV=1)
HSP 1 Score: 135.191 bits (339), Expect = 2.871e-31
Identity = 65/146 (44.52%), Postives = 103/146 (70.55%), Query Frame = -2
Query: 213 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 650
+NP +LD I+V+YYGS + L+ +A I D+ +L+I +D+S +K +EKAI+ SDLG+TP+ G +IR+ LP LT ERR+ L K+V +AE+GK++VRNIRRDA + L K K +S D + S++QK+T+ +++++D I +
Sbjct: 32 ANPNLLDNIKVDYYGSIMPLRQLANIIVEDTRTLVITLFDQSIIKRVEKAIIISDLGLTPDLSGTIIRVQLPSLTEERRRNLIKIVRNEAEQGKISVRNIRRDANDHIKILLKNKAISIDEERRSQSEIQKITEAWIRRLDQILSE 177
The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (
BLAST: Citrus ESTs to SwissProt )
Total hits: 500
50 100 150 200 250 300 350 400 450 500 550 600 650 Expect = 2.87e-31 / Id = 45.77 Expect = 2.87e-31 / Id = 45.77 Expect = 2.87e-31 / Id = 45.77 Expect = 2.87e-31 / Id = 48.87 Expect = 2.87e-31 / Id = 43.36 Expect = 2.87e-31 / Id = 43.45 Expect = 2.87e-31 / Id = 43.45 Expect = 2.87e-31 / Id = 45.39 Expect = 2.87e-31 / Id = 45.45 Expect = 2.87e-31 / Id = 44.52 Sequence RRF_SALCH RRF_SALAR RRF_SALA4 RRF_RHOBA RRF_RALME RRF_MYCBT RRF_MYCBP RRF_HELAH RRF_BIFAA RRF_BAUCH
Match Name E-value Identity Description
RRF_SALCH 2.871e-31 45.77 Ribosome-recycling factor OS=Salmonella choleraesu... [more]
RRF_SALAR 2.871e-31 45.77 Ribosome-recycling factor OS=Salmonella arizonae (... [more]
RRF_SALA4 2.871e-31 45.77 Ribosome-recycling factor OS=Salmonella agona (str... [more]
RRF_RHOBA 2.871e-31 48.87 Ribosome-recycling factor OS=Rhodopirellula baltic... [more]
RRF_RALME 2.871e-31 43.36 Ribosome-recycling factor OS=Ralstonia metallidura... [more]
RRF_MYCBT 2.871e-31 43.45 Ribosome-recycling factor OS=Mycobacterium bovis (... [more]
RRF_MYCBP 2.871e-31 43.45 Ribosome-recycling factor OS=Mycobacterium bovis (... [more]
RRF_HELAH 2.871e-31 45.39 Ribosome-recycling factor OS=Helicobacter acinonyc... [more]
RRF_BIFAA 2.871e-31 45.45 Ribosome-recycling factor OS=Bifidobacterium adole... [more]
RRF_BAUCH 2.871e-31 44.52 Ribosome-recycling factor OS=Baumannia cicadellini... [more]
Pages back to top