CF832535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_MYCGI (Ribosome-recycling factor OS=Mycobacterium gilvum (strain PYR-GCK) GN=frr PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.174e-30 Identity = 57/145 (39.31%), Postives = 97/145 (66.90%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 +NP M ++I ++YYG+ + ++ IN P++ ++I+PY+ + L+ IE AI +SDLG+ P NDG +IR+++PQLT ERR++L K + E+ KV++RNIRR A++ +++K+ ED+V DL K T +Y ++D + K Sbjct: 32 ANPGMFNRIHIDYYGASTPITQLSSINVPEARMVVIKPYEANQLRPIEDAIRNSDLGVNPTNDGNIIRVSIPQLTEERRRDLVKQAKSKGEDAKVSIRNIRRKAMEELARIKKDGDAGEDDVTRAEKDLDKSTHQYTSQVDDLVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_MYCA1 (Ribosome-recycling factor OS=Mycobacterium avium (strain 104) GN=frr PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.174e-30 Identity = 61/145 (42.07%), Postives = 96/145 (66.21%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 +NP M +I ++YYG+ + +A IN P++ ++I+PY+ S + +IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL K + E+ KV+VRNIRR A++ +++K+ + ED V DL K T +Y+ +ID + K Sbjct: 32 ANPGMFSRIVIDYYGAATPITQLASINVPEARLVVIKPYEASQVGAIETAIRNSDLGVNPTNDGTLIRVAVPQLTEERRRELVKQAKSKGEDAKVSVRNIRRKAMEELHRIRKDGEAGEDEVGRAEKDLDKTTHQYITQIDELVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_GEOBB (Ribosome-recycling factor OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=frr PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.174e-30 Identity = 61/143 (42.66%), Postives = 100/143 (69.93%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++ ++LD I+V+ YG+ L +A + P++ ++ I P+D + IEKAI++S+LG+ P NDG++IRLTLP LT ERRK++ K + + AE+ KVA+RNIRRDA+ +KL+K+K +SED K ++Q T+ ++ K+D + Sbjct: 32 ASTSLLDDIKVDSYGTLSPLNQVATLAIPEARTITISPWDSKMIAPIEKAIMNSNLGLNPANDGKMIRLTLPPLTEERRKDIVKQLKRDAEDAKVALRNIRRDAIDQLKKLEKDKSISEDEQKRAEKEVQDFTNSHVAKVDEV 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CHLSY (Ribosome-recycling factor OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=frr PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.174e-30 Identity = 65/143 (45.45%), Postives = 98/143 (68.53%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++ A+++ + VE YG + L +A I+ P+ ++IQPYD + +K+IEKAI SDLG+ P+NDG VIRL +P LT ERR+EL K+V + EE K++VRN RRDA+ +KL+ EK +SED + +Q+LTD +++D I Sbjct: 32 ASSALVEHLHVEAYGMTMPLNQLANISVPEPRLIVIQPYDANMIKAIEKAIQQSDLGLNPSNDGRVIRLPVPPLTEERRRELVKMVRHRVEEVKISVRNQRRDAIDDLKKLEAEKLISEDELHRGQERIQQLTDRCTRELDQI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CHLAA (Ribosome-recycling factor OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=frr PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.174e-30 Identity = 65/143 (45.45%), Postives = 98/143 (68.53%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++ A+++ + VE YG + L +A I+ P+ ++IQPYD + +K+IEKAI SDLG+ P+NDG VIRL +P LT ERR+EL K+V + EE K++VRN RRDA+ +KL+ EK +SED + +Q+LTD +++D I Sbjct: 32 ASSALVEHLHVEAYGMTMPLNQLANISVPEPRLIVIQPYDANMIKAIEKAIQQSDLGLNPSNDGRVIRLPVPPLTEERRRELVKMVRHRVEEVKISVRNQRRDAIDDLKKLEAEKLISEDELHRGQERIQQLTDRCTRELDQI 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_CAMLR (Ribosome-recycling factor OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=frr PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.174e-30 Identity = 63/144 (43.75%), Postives = 95/144 (65.97%), Query Frame = -2 Query: 216 NPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 647 N +LD + V+YYGS L +A + D+S++ I P++K LK+IE AI ++++G+ PNNDGE ++L P +T E+R+E +K E+ KVA+RNIR+DA A +KL+K+K +SED K ++QK TD Y KID + K Sbjct: 33 NINILDHVHVDYYGSQTPLNQVATVLATDASTISITPWEKPMLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENAKSAKAMGEKAKVAIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKQTDNYTTKIDELVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_VIBFM (Ribosome-recycling factor OS=Vibrio fischeri (strain MJ11) GN=frr PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.145e-30 Identity = 68/143 (47.55%), Postives = 95/143 (66.43%), Query Frame = -2 Query: 222 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 650 ++P++L I VEYYG+ L +A + DS +L I +DK +EKAI+ SDLG+ P + G VIR+ LP LT ERRK+L K+V +AE G+VAVRNIRRDA + L KEK++SED+ + ++QKLTD +K ID + Sbjct: 32 AHPSLLSGISVEYYGAKTPLNQVANVVAEDSRTLAITVFDKELAGLVEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRKDLVKIVRGEAENGRVAVRNIRRDANGDVKALLKEKEISEDDDRRAQDEIQKLTDAAVKSIDEV 174
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_RHOOB (Ribosome-recycling factor OS=Rhodococcus opacus (strain B4) GN=frr PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.145e-30 Identity = 59/145 (40.69%), Postives = 97/145 (66.90%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 +NP M ++I ++YYG+ + +A IN P++ ++++PY+ S L +IE AI +SDLG+ P+NDG +IR+++PQLT ERR+EL K + E+ KV+VRN+RR A+ ++QK+ + ED V +L K T Y+ ++D + K Sbjct: 32 ANPGMFNRIGIDYYGAFTPITQLASINVPEARLVVVKPYEASQLNAIETAIRNSDLGVNPSNDGNLIRISVPQLTEERRRELVKQAKSKGEDAKVSVRNVRRKAMDELSRIQKDGEAGEDEVGRAEKELDKTTARYVAQVDELVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_MYCUA (Ribosome-recycling factor OS=Mycobacterium ulcerans (strain Agy99) GN=frr PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.145e-30 Identity = 60/145 (41.38%), Postives = 96/145 (66.21%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 +NP M +I ++YYG+ + +A IN P++ ++I+PY+ + L +IE AI +SDLG+ P NDG +IR+ +PQLT ERR++L K + EE +V+VRNIRR A++ +++K+ + ED V DL K T +Y+ +ID + K Sbjct: 32 ANPGMFSRIVIDYYGTHTPITQLASINVPEARMVVIKPYEANQLHAIETAIRNSDLGVNPTNDGTIIRVAVPQLTEERRRDLVKQAKHKGEEARVSVRNIRRKAMEELHRIRKDGEAGEDEVARAEKDLDKSTHQYVAQIDELVK 176
BLAST of CF832535 vs. ExPASy Swiss-Prot
Match: RRF_MYCMM (Ribosome-recycling factor OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=frr PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.145e-30 Identity = 60/145 (41.38%), Postives = 96/145 (66.21%), Query Frame = -2 Query: 216 SNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 650 +NP M +I ++YYG+ + +A IN P++ ++I+PY+ + L +IE AI +SDLG+ P NDG +IR+ +PQLT ERR++L K + EE +V+VRNIRR A++ +++K+ + ED V DL K T +Y+ +ID + K Sbjct: 32 ANPGMFSRIVIDYYGTHTPITQLASINVPEARMVVIKPYEANQLHAIETAIRNSDLGVNPTNDGTIIRVAVPQLTEERRRDLVKQAKHKGEEARVSVRNIRRKAMEELHRIRKDGEAGEDEVARAEKDLDKSTHQYVAQIDELVK 176 The following BLAST results are available for this feature:
BLAST of CF832535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832535 ID=CF832535; Name=CF832535; organism=Citrus sinensis; type=EST; length=651bpback to top |