CF832536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_RALME (Ribosome-recycling factor OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=frr PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.749e-31 Identity = 62/139 (44.60%), Postives = 102/139 (73.38%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +LD ++V+YYGS V + +A ++ D+ ++ +QP++K ++++EKAI DLG+ P G+VIR+ +P LT ERR+EL+KVV +AE KVAVRN+RRDA + ++KL K+K +SED+ + ++QKLTD+++ +ID + Sbjct: 37 LLDHVQVDYYGSMVPISQVAAVSLADARTISVQPWEKKMVQAVEKAIRDGDLGLNPATMGDVIRVPMPPLTEERRRELTKVVKGEAEGAKVAVRNLRRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDKFVAEIDKL 175
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_PSYCK (Ribosome-recycling factor OS=Psychrobacter cryohalolentis (strain K5) GN=frr PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.749e-31 Identity = 63/142 (44.37%), Postives = 101/142 (71.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P ML + V YYGSP L +A +N DS +LL+QP+D++ +++I+KAI +DLG+ P +VIR+ +P LT E RK++ K+ +AE +V++RNIRRD + ++L KEK++SED+ + S D+QK+TD+Y++ IDS Sbjct: 32 AHPGMLTGVMVSYYGSPTPLNQVASVNVEDSRTLLVQPFDRTMVQAIDKAIREADLGLNPMT-ADVIRVPMPALTEETRKDMQKLARGEAENSRVSIRNIRRDMMNDIKELAKEKEISEDDERRASDDIQKITDKYIETIDS 172
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_HAEI8 (Ribosome-recycling factor OS=Haemophilus influenzae (strain 86-028NP) GN=frr PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.749e-31 Identity = 61/143 (42.66%), Postives = 100/143 (69.93%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 + P +LD I+VEYYG+ L+ +A + D+ +L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V + E+GKVA+RN+RRDA + L K+K++SE+ ++QK+TD Y+KK+D + Sbjct: 32 AQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEGEQGKVAIRNVRRDANDKIKALLKDKEISENEQHKAEEEIQKITDIYIKKVDEV 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_ERWT9 (Ribosome-recycling factor OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=frr PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.749e-31 Identity = 66/142 (46.48%), Postives = 102/142 (71.83%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P +LD I V+YYGS L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L KVV +AE+G+V+VRN+RRDA + L K+K++SED+ + D+QK+TD ++KK+D+ Sbjct: 32 ASPSILDGIMVDYYGSATPLRQLASVTVEDSRTLKINVFDRSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVVRGEAEQGRVSVRNVRRDANDKLKALLKDKEISEDDDRRAQEDVQKMTDIFIKKVDA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BIFLO (Ribosome-recycling factor OS=Bifidobacterium longum GN=frr PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.749e-31 Identity = 64/143 (44.76%), Postives = 97/143 (67.83%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP +L+ I V+YYG+P +K++A I P+ +L + P+D S ++EKA+ +SDLG++PN DG VIRLT+P+LT +RRKE K+ +AE+GKVAVRNIRR + +K K+ ++ ED L DL K+T +ID++ Sbjct: 30 ANPALLNGITVDYYGAPTPIKAVASIGVPEPRTLSVTPFDASQAGAVEKALRNSDLGISPNRDGNVIRLTMPELTEDRRKEYVKLAKGKAEDGKVAVRNIRRKTKETIDKAVKDGEMGEDEGDRLLKDLDKVTKSVTDEIDTL 172
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BIFLD (Ribosome-recycling factor OS=Bifidobacterium longum (strain DJO10A) GN=frr PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.749e-31 Identity = 64/143 (44.76%), Postives = 97/143 (67.83%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP +L+ I V+YYG+P +K++A I P+ +L + P+D S ++EKA+ +SDLG++PN DG VIRLT+P+LT +RRKE K+ +AE+GKVAVRNIRR + +K K+ ++ ED L DL K+T +ID++ Sbjct: 30 ANPALLNGITVDYYGAPTPIKAVASIGVPEPRTLSVTPFDASQAGAVEKALRNSDLGISPNRDGNVIRLTMPELTEDRRKEYVKLAKGKAEDGKVAVRNIRRKTKETIDKAVKDGEMGEDEGDRLLKDLDKVTKSVTDEIDTL 172
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BAUCH (Ribosome-recycling factor OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=frr PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.749e-31 Identity = 65/146 (44.52%), Postives = 103/146 (70.55%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 440 +NP +LD I+V+YYGS + L+ +A I D+ +L+I +D+S +K +EKAI+ SDLG+TP+ G +IR+ LP LT ERR+ L K+V +AE+GK++VRNIRRDA + L K K +S D + S++QK+T+ +++++D I + Sbjct: 32 ANPNLLDNIKVDYYGSIMPLRQLANIIVEDTRTLVITLFDQSIIKRVEKAIIISDLGLTPDLSGTIIRVQLPSLTEERRRNLIKIVRNEAEQGKISVRNIRRDANDHIKILLKNKAISIDEERRSQSEIQKITEAWIRRLDQILSE 177
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_ALHEH (Ribosome-recycling factor OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=frr PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.749e-31 Identity = 67/142 (47.18%), Postives = 96/142 (67.61%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 440 +LD I V YYG+ V L A + D+ +L + P++KS + +EKAI SSDLG+TP G VIR+ +P LT +RRKEL KVV +AE+ +VA+RNIRRDA ++L KEK++SED + +QKLTD+Y ++D I ++ Sbjct: 36 LLDHISVTYYGTEVPLNQAASVKVEDARTLSVIPFEKSMVPEVEKAIQSSDLGLTPTTAGTVIRIPMPPLTEDRRKELVKVVRSEAEQARVAIRNIRRDANSDLKELLKEKEISEDEERGGEDAIQKLTDKYTGEVDRILQE 177
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_THERP (Ribosome-recycling factor OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=frr PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.896e-31 Identity = 63/144 (43.75%), Postives = 102/144 (70.83%), Query Frame = 3 Query: 9 PVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 440 P +L+ +EV YYG+P L +A I+ P++ L++Q +D++++ ++EKAI S+LG+ P+ DG+ +R+ LP LT ERR++L K+V ++ EE KVA+RNIRRDAL ++L K K++SED+ + LQ LT+ Y+ + D + KQ Sbjct: 34 PSLLEHLEVNYYGTPTPLNQLATISAPEARLLVVQVWDRNAVSAVEKAIRQSELGLNPSVDGQTLRIQLPPLTEERRRQLVKLVHEEVEETKVAIRNIRRDALADIKELLKNKEISEDDERRAEQRLQDLTNRYIAEADKLGKQ 177
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_MYCTU (Ribosome-recycling factor OS=Mycobacterium tuberculosis GN=frr PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.896e-31 Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +NP M +I ++YYG+ + +A IN P++ ++I+PY+ + L++IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL K + EE KV+VRNIRR A++ +++KE + ED V DL K T +Y+ +ID + K Sbjct: 32 ANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVK 176 The following BLAST results are available for this feature:
BLAST of CF832536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832536 ID=CF832536; Name=CF832536; organism=Citrus sinensis; type=EST; length=651bpback to top |