CF832536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SALPB (Ribosome-recycling factor OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 65/142 (45.77%), Postives = 101/142 (71.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P +LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SALNS (Ribosome-recycling factor OS=Salmonella newport (strain SL254) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 65/142 (45.77%), Postives = 101/142 (71.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P +LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SALHS (Ribosome-recycling factor OS=Salmonella heidelberg (strain SL476) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 65/142 (45.77%), Postives = 101/142 (71.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P +LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SALG2 (Ribosome-recycling factor OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 65/142 (45.77%), Postives = 101/142 (71.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P +LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SALEP (Ribosome-recycling factor OS=Salmonella enteritidis PT4 (strain P125109) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 65/142 (45.77%), Postives = 101/142 (71.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P +LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SALDC (Ribosome-recycling factor OS=Salmonella dublin (strain CT_02021853) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 65/142 (45.77%), Postives = 101/142 (71.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P +LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SALCH (Ribosome-recycling factor OS=Salmonella choleraesuis GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 65/142 (45.77%), Postives = 101/142 (71.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P +LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SALAR (Ribosome-recycling factor OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 65/142 (45.77%), Postives = 101/142 (71.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P +LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SALA4 (Ribosome-recycling factor OS=Salmonella agona (strain SL483) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 65/142 (45.77%), Postives = 101/142 (71.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P +LD I VEYYG+P L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L+K+V +AE+ +VAVRN+RRDA + L K+K +SED+ + ++QK+TD +KK+D+ Sbjct: 32 ASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMGPAVEKAIMASDLGLNPSSAGTDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKAISEDDDRRSQEEVQKMTDAAIKKVDA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_RHOBA (Ribosome-recycling factor OS=Rhodopirellula baltica GN=frr PE=3 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 65/133 (48.87%), Postives = 94/133 (70.68%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLT 401 +NP ++D I+VE YGS LK +A I TP+ +LI+PYD +++K IEKAIV+ DLG+ P NDG VIRL +P L+ E RK++ + + AEE KV++RNIRRDA KA E +K+K+++ED+ +Q+LT Sbjct: 33 ANPGLVDSIKVEVYGSLTPLKQLASIGTPEPQQILIRPYDATTIKDIEKAIVAGDLGLNPQNDGRVIRLNVPPLSGEVRKKMVSRIKELAEEAKVSIRNIRRDANKAAETAEKDKEMTEDDRDKTKDQVQELT 165 The following BLAST results are available for this feature:
BLAST of CF832536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832536 ID=CF832536; Name=CF832536; organism=Citrus sinensis; type=EST; length=651bpback to top |