CF832536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_MYCBT (Ribosome-recycling factor OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +NP M +I ++YYG+ + +A IN P++ ++I+PY+ + L++IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL K + EE KV+VRNIRR A++ +++KE + ED V DL K T +Y+ +ID + K Sbjct: 32 ANPGMFSRITIDYYGAATLITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_MYCBP (Ribosome-recycling factor OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +NP M +I ++YYG+ + +A IN P++ ++I+PY+ + L++IE AI +SDLG+ P NDG +IR+ +PQLT ERR+EL K + EE KV+VRNIRR A++ +++KE + ED V DL K T +Y+ +ID + K Sbjct: 32 ANPGMFSRITIDYYGAATLITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_JANMA (Ribosome-recycling factor OS=Janthinobacterium sp. (strain Marseille) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 63/139 (45.32%), Postives = 97/139 (69.78%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +LD + VEYYG+P +L +A + D+ ++ +QP++K + +EKAI +DLG+ P GE+IR+ P LT ERRKE+ K+V +AE+ K+AVRNIRRDA ++ +KL KEK SED + ++QKLTD+++ +ID + Sbjct: 37 ILDHVMVEYYGNPTNLSQVANVTLIDARTIGVQPFEKKMVAVVEKAIREADLGLNPATQGELIRVPTPPLTEERRKEMVKLVKSEAEDAKIAVRNIRRDANESLKKLVKEKACSEDEERRAQDEIQKLTDKFVIEIDKL 175
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CORGL (Ribosome-recycling factor OS=Corynebacterium glutamicum GN=frr PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 61/143 (42.66%), Postives = 96/143 (67.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP M + + EYYG P + ++ I P+ LLI+PY+ SS++ IE AI +SDLG+ P NDG+V+R+T+PQLT ERRK++ K+ + E+GK+A+RNIRR + +KLQK+ ED V+ +L K+T ++ ++D + Sbjct: 32 ANPAMFNGVMAEYYGVPTPITQMSGITVPEPRMLLIKPYEMSSMQVIENAIRNSDLGVNPTNDGQVLRVTIPQLTEERRKDMVKLAKGKGEDGKIAIRNIRRKGMDQLKKLQKDGDAGEDEVQAAEKELDKVTAGFVAQVDEV 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BURM1 (Ribosome-recycling factor OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 61/139 (43.88%), Postives = 101/139 (72.66%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +LD ++V+YYGS V + +A + D+ ++ +QP++K+ + +EKAI +DLG+ P G++IR+ +P LT ERR+EL+KVV + E KVA+RN+RRDA +A +KL K+K++SED+ + D+QKLTD+++ +ID + Sbjct: 37 LLDHVQVDYYGSMVPISQVANLTLVDARTIGVQPWEKNMVAKVEKAIREADLGLNPATAGDLIRVPMPPLTEERRRELTKVVKGEGETAKVAIRNLRRDANEALKKLVKDKEISEDDERRAGDDVQKLTDKHVAEIDKL 175
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BRASO (Ribosome-recycling factor OS=Bradyrhizobium sp. (strain ORS278) GN=frr PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.395e-31 Identity = 63/139 (45.32%), Postives = 100/139 (71.94%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 M++ ++VE YGS + L +A ++ P+ L +Q +D+S +K++EKAIV S+LG++P +G+VIRL +P+L ERRKEL KV K AE+ +VAVR++RRD L +KL+K ++SED+ + L+ D+QK TD + +ID + Sbjct: 38 MVEPVQVEAYGSHMPLNQLATVSVPEPRLLSVQVWDRSMVKAVEKAIVDSNLGLSPATEGQVIRLRIPELNQERRKELVKVAHKYAEQARVAVRHVRRDGLDTLKKLEKNHEMSEDDQERLAGDVQKATDSVISEIDQL 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_RUTMC (Ribosome-recycling factor OS=Ruthia magnifica subsp. Calyptogena magnifica GN=frr PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.352e-31 Identity = 62/138 (44.93%), Postives = 98/138 (71.01%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 +L++I V+YYGS V L +A I+ DS + + P++K + IEKAI++S+LG+ P G+++R+ LP LT ERR EL K+V +AE+ KVA+RNIRRDA +++L KEK++S D + + +QK+TD Y+K+I++ Sbjct: 36 LLEQIHVDYYGSMVPLSQVANISVEDSRTFKVSPWEKDMVAVIEKAIMTSNLGLNPQTMGQIMRIPLPPLTQERRGELVKIVKDEAEQAKVAIRNIRRDANSDFKELLKEKEISRDGARKAENSIQKITDTYIKEIEA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_RICCK (Ribosome-recycling factor OS=Rickettsia canadensis (strain McKiel) GN=frr PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.352e-31 Identity = 65/142 (45.77%), Postives = 97/142 (68.31%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 440 +LD + VE YGS + L +A I+TPD+ ++ +Q +DKS + +EK I ++LG+TP DG++IRL +P LT ERRKEL K+ K E+ K+++RNIRRD + +KL+K L++D LS +QKLT++Y K+DS KQ Sbjct: 37 LLDSVIVEAYGSKIPLSQVASISTPDARTINVQVWDKSMVSLVEKGITIANLGLTPATDGQLIRLPIPILTEERRKELVKLAHKYGEDTKISLRNIRRDGNEELKKLEKNNILTKDEHHSLSEQVQKLTNDYSNKVDSAIKQ 178
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_RHOP5 (Ribosome-recycling factor OS=Rhodopseudomonas palustris (strain BisA53) GN=frr PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.352e-31 Identity = 63/139 (45.32%), Postives = 102/139 (73.38%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 ML+ ++V+ YG+ + L +A I+ P+ L +Q +DKS +K++EKAIV S+LG++P+ +G+VIRL +P+L ERRKEL KV K AE +VAVR++RRD L +KL+K ++SED+ + L+ D+QK+TD ++++D + Sbjct: 38 MLEPVQVDAYGTHMPLIQVATISVPEPRLLSVQVWDKSMIKAVEKAIVDSNLGLSPSTEGQVIRLRIPELNEERRKELVKVAHKYAEAARVAVRHVRRDGLDTLKKLEKNHEISEDDQERLAHDVQKVTDATIQEVDQL 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_MYCA9 (Ribosome-recycling factor OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=frr PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.352e-31 Identity = 61/145 (42.07%), Postives = 96/145 (66.21%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +NP M ++ ++YYG+P + +A IN P++ ++I+PY+ + LK+IE AI +SDLG+ P+NDG +IR+ +PQLT ERR+EL K + E+ KV +RNIRR A +++K+ + ED V DL K T +Y+ +ID + K Sbjct: 32 ANPGMFQRVVIDYYGTPTPITQVAGINVPEARMVVIKPYESNQLKAIEDAIRNSDLGLNPSNDGSIIRVAIPQLTEERRRELVKQAKGKGEDAKVTLRNIRRKANDELNRIKKDGEAGEDEVGRAEKDLDKTTAQYVSQIDELVK 176 The following BLAST results are available for this feature:
BLAST of CF832536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832536 ID=CF832536; Name=CF832536; organism=Citrus sinensis; type=EST; length=651bpback to top |