CF832536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_ENT38 (Ribosome-recycling factor OS=Enterobacter sp. (strain 638) GN=frr PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.352e-31 Identity = 68/142 (47.89%), Postives = 100/142 (70.42%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P +LD I VEYYG+P L+ +A + D+ +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRKEL KVV +AE +VAVRN+RRDA + L K+K++SED+ + D+QKLTD +KK+D+ Sbjct: 32 ASPSLLDGIIVEYYGTPTPLRQLASVTVEDTRTLKINVFDRSLGPAVEKAIMASDLGLNPSSAGTDIRVPLPALTEERRKELIKVVRGEAEGARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKLDA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BIFAA (Ribosome-recycling factor OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=frr PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.352e-31 Identity = 64/143 (44.76%), Postives = 96/143 (67.13%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP +L+ I V+YYG+P LK++A I P+ +L + P+D S ++EKA+ SDLG +P DG VIRLT+P+LT ERRKE K+ +AE+GKVAVRNIRR A ++ +K K+ + ED L +L K+T + ++D++ Sbjct: 31 ANPALLNGITVDYYGAPTPLKAVATIGVPEPRTLAVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKIAKGKAEDGKVAVRNIRRKAKESLDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDAL 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_ACIAC (Ribosome-recycling factor OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=frr PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.352e-31 Identity = 61/143 (42.66%), Postives = 102/143 (71.33%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP +LD ++VEYYGS V L +A ++ D+ ++ +QP++K IEKAI S+LG+ P + G++IR+ +P ++ ERRKE++K+ + E KVAVRN+RRDA ++ +KL K+K SED K +D+QK+TD+++ ++D++ Sbjct: 33 ANPALLDSVQVEYYGSMVPLSQVANVSLIDARTISVQPWEKGMGAKIEKAIRESELGLNPASMGDLIRVPMPPMSEERRKEMTKLARNEGEGAKVAVRNLRRDANESVKKLVKDKLASEDEQKRAEADIQKVTDKHIAEVDAL 175
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_PHOPR (Ribosome-recycling factor OS=Photobacterium profundum GN=frr PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.091e-30 Identity = 67/143 (46.85%), Postives = 99/143 (69.23%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 ++P +LD I VEYYG+ LK +A + DS +L I +D+ IEKAI+ SDLG+ P + G VIR+ LP LT ERR++L K+V K+AE+G+VA+RNIRRDA + L K+K++SED+ + ++QKLTD +K I+++ Sbjct: 32 AHPSLLDTIYVEYYGANTPLKQLANVVAEDSRTLAITVFDRELTPKIEKAIMMSDLGLNPMSAGTVIRVPLPPLTEERRRDLVKIVRKEAEQGRVAIRNIRRDANADLKALLKDKEISEDDDRRAQDEIQKLTDVAVKNIEAV 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_NITMU (Ribosome-recycling factor OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=frr PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.091e-30 Identity = 63/139 (45.32%), Postives = 96/139 (69.06%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +LD + V+YYG+P ++ +A I+ D+ ++ + P++K L +IEKAI +SDLG+ P GE+IR+ +P LT ERR++L+KVV + E +VA+RNIRRDA + L KEKK++ED + D+QKLTD Y+ ID + Sbjct: 36 LLDHVTVDYYGNPTAINQVANISLADARTITVAPWEKKMLGAIEKAIRNSDLGLNPTTVGELIRVPMPPLTEERRRDLTKVVKHEGEAARVAMRNIRRDANAHLKDLLKEKKIAEDEERKGQEDIQKLTDRYIADIDKL 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_LEPCP (Ribosome-recycling factor OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=frr PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.091e-30 Identity = 65/143 (45.45%), Postives = 101/143 (70.63%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 ++P +LD++ V+YYGS + L +A + D+ ++ +QP++KS + IEKAI SDLG+ P++ G++IR+ +P LT ERRKEL+KVV E+ KVAVRN+RRDA +KL K+K +SED+ + ++QKLTD + +ID + Sbjct: 33 AHPGILDQVHVDYYGSNLPLSQVANVTLIDARTISVQPWEKSMAQKIEKAIRESDLGLNPSSMGDLIRVPMPALTEERRKELTKVVRHAGEDSKVAVRNLRRDANDQAKKLLKDKLISEDDERRSVDEVQKLTDRVIAEIDRL 175
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_EDWI9 (Ribosome-recycling factor OS=Edwardsiella ictaluri (strain 93-146) GN=frr PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.091e-30 Identity = 67/142 (47.18%), Postives = 100/142 (70.42%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDS 428 ++P +LD I+VEYYG+ L+ +A I DS +L + +D+S +IEKAI++SDLG+ P + G VIR+ LP LT ERRK+L K+V +AE G+V+VRN+RRDA + L K+K++SED + ++QK+TD +KKID+ Sbjct: 32 AHPNLLDGIQVEYYGTATPLRQLANIVAEDSRTLALTVFDRSMSGAIEKAILTSDLGLNPASAGTVIRVPLPPLTEERRKDLIKLVRSEAESGRVSVRNVRRDANDKVKALLKDKEISEDEDRKSQEEIQKITDLMIKKIDA 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_DESPS (Ribosome-recycling factor OS=Desulfotalea psychrophila GN=frr PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.091e-30 Identity = 65/139 (46.76%), Postives = 96/139 (69.06%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +LD I V YGS + L +A + P+S + +QP+D + IEKAI+ S LG+ P NDG+V+RL +PQLT +RRK+L K V K AEE +VA+RN+RRDA+ + +K+K++SED++ L D QK TD Y+K++D + Sbjct: 35 ILDDITVVAYGSTMPLNQVATLTIPESRMIALQPWDPQMIPPIEKAILKSGLGLNPVNDGKVVRLNIPQLTEDRRKDLVKQVKKIAEEFRVAIRNVRRDAIDTLKLQKKDKEISEDDLFKLQDDAQKETDIYIKQLDEV 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BORT9 (Ribosome-recycling factor OS=Borrelia turicatae (strain 91E135) GN=frr PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.091e-30 Identity = 63/143 (44.06%), Postives = 100/143 (69.93%), Query Frame = 3 Query: 6 NPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIY 434 N + DK+ V+YYG L +A ++ P++ ++IQP+DKS L IE+AI+SSDL M P++DG V+R+ +P LT ERRKE+ K K AEE KVA RN+R++ +K +K+ +++ED+++ + D+Q+ T+ Y+KKID I+ Sbjct: 32 NSSLFDKVLVDYYGEKTPLTRVANVSIPEARLIVIQPWDKSLLSKIEQAILSSDLSMNPSSDGAVLRIKVPVLTVERRKEIVKQAKKIAEEYKVAARNVRQELNSKAKKQEKDSQITEDDLRRILDDIQRDTNSYIKKIDEIF 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_TOLAT (Ribosome-recycling factor OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=frr PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.425e-30 Identity = 62/143 (43.36%), Postives = 99/143 (69.23%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 + P +LD I VEYYGS L+ +A + DS +L + +D+S ++++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L K+V +AE+ +V+VRN+RRD + L K+K +SED+ + ++QKLTD ++K +D + Sbjct: 32 AQPALLDGIMVEYYGSATPLRQVANVVAEDSRTLAVSVFDRSMIQAVEKAIMTSDLGLNPSSAGTTIRVPLPALTEERRKDLIKLVRAEAEQARVSVRNVRRDCNADLKALLKDKDISEDDDRRAQEEIQKLTDSFVKLVDDL 174 The following BLAST results are available for this feature:
BLAST of CF832536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832536 ID=CF832536; Name=CF832536; organism=Citrus sinensis; type=EST; length=651bpback to top |