CF832536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BORBZ (Ribosome-recycling factor OS=Borrelia burgdorferi (strain ZS7) GN=frr PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.145e-30 Identity = 62/139 (44.60%), Postives = 99/139 (71.22%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 + DKI ++Y+G + ++ I P++ ++IQP+DK+ L IE+AI++SDL M P++DG VIR+ +P LTSERR+++ K K AEE K++ RNIR+D +K +KE +++ED++K + D+QK TD Y+KKID+I Sbjct: 35 IFDKIFIQYHGQRTPITQVSSIRIPEARLVVIQPWDKTILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKISTRNIRQDLNNKVKKQEKESEITEDSLKRILDDIQKSTDIYIKKIDAI 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BORBU (Ribosome-recycling factor OS=Borrelia burgdorferi GN=frr PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.145e-30 Identity = 64/139 (46.04%), Postives = 97/139 (69.78%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 + D+I ++Y+ + ++ I P++ ++IQP+DKS L IE+AI++SDL M P+NDG VIR+ +P LTSERR+E+ K K AEE K++ RNIR+D +K +KE +++ED +K + D+QK TD Y+KKIDSI Sbjct: 35 IFDRICIQYHDRRTPITQVSSIRIPEARLVVIQPWDKSILNKIEQAILNSDLSMNPSNDGSVIRIKVPNLTSERRQEIVKHAKKIAEEHKISTRNIRQDLNNKVKKQEKESEITEDCLKRILDDIQKSTDMYIKKIDSI 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BORAP (Ribosome-recycling factor OS=Borrelia afzelii (strain PKo) GN=frr PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.145e-30 Identity = 62/139 (44.60%), Postives = 99/139 (71.22%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 + DKI ++Y+G + ++ I P++ ++IQP+DK+ L IE+AI++SDL M P++DG VIR+ +P LTSERR+++ K K AEE K++ RNIR+D +K +KE +++ED++K + D+QK TD Y+KKID+I Sbjct: 35 IFDKIFIQYHGQRTPITQVSSIRIPEARLVVIQPWDKTILNKIEQAILNSDLSMNPSSDGSVIRIKVPALTSERRQDIVKHAKKIAEEHKISTRNIRQDLNNKVKKQEKESEITEDSLKRILDDIQKSTDIYIKKIDAI 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_VIBPA (Ribosome-recycling factor OS=Vibrio parahaemolyticus GN=frr PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 66/143 (46.15%), Postives = 95/143 (66.43%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 ++P +L I VEYYG+ L +A + D+ +L I +DK + +EKAI+ SDLG+ P + G +IR+ LP LT ERRK+L K+V +AE G+VAVRNIRRDA + L K+K++SED + ++QKLTD +KKID + Sbjct: 32 AHPSLLSGISVEYYGAATPLNQVANVVAEDARTLAITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEV 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_VIBCM (Ribosome-recycling factor OS=Vibrio cholerae serotype O1 (strain M66-2) GN=frr PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 64/143 (44.76%), Postives = 97/143 (67.83%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 ++P +L I V+YYG+P L +A + D+ +L I +D+ + +EKAI+ SDLG+ P + G +IR+ LP LT ERR++L K+V +AE G+VAVRNIRRDA + L K+K++SED+ + ++QKLTD +KKID + Sbjct: 32 AHPSLLTGISVDYYGAPTPLNQVANVIAEDARTLAITVFDRELTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDKEISEDDERRAQEEIQKLTDAAVKKIDDV 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_VIBCH (Ribosome-recycling factor OS=Vibrio cholerae GN=frr PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 64/143 (44.76%), Postives = 97/143 (67.83%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 ++P +L I V+YYG+P L +A + D+ +L I +D+ + +EKAI+ SDLG+ P + G +IR+ LP LT ERR++L K+V +AE G+VAVRNIRRDA + L K+K++SED+ + ++QKLTD +KKID + Sbjct: 32 AHPSLLTGISVDYYGAPTPLNQVANVIAEDARTLAITVFDRELTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDKEISEDDERRAQEEIQKLTDAAVKKIDDV 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_VIBC3 (Ribosome-recycling factor OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=frr PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 64/143 (44.76%), Postives = 97/143 (67.83%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 ++P +L I V+YYG+P L +A + D+ +L I +D+ + +EKAI+ SDLG+ P + G +IR+ LP LT ERR++L K+V +AE G+VAVRNIRRDA + L K+K++SED+ + ++QKLTD +KKID + Sbjct: 32 AHPSLLTGISVDYYGAPTPLNQVANVIAEDARTLAITVFDRELTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDKEISEDDERRAQEEIQKLTDAAVKKIDDV 174
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_SACEN (Ribosome-recycling factor OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=frr PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 61/145 (42.07%), Postives = 96/145 (66.21%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +NP M I V+YYGSP L +A I+ P++ ++I+PYD S L ++EKAI SDLG+ P+NDG++IR+++PQ+T ERRKE+ K+ + EEG++ VR IRR + +++ K+ + ED +L+ LT Y+ +ID + K Sbjct: 32 ANPAMFSGIVVDYYGSPTPLNQLASISVPEARLVVIKPYDASQLGAMEKAIRDSDLGVNPSNDGQLIRVSIPQMTEERRKEMVKLAKHKGEEGRITVRGIRRKVKEEIDRIVKDGEAGEDEGTRGEKELENLTHRYVAQIDELVK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_MYXXD (Ribosome-recycling factor OS=Myxococcus xanthus (strain DK 1622) GN=frr PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 62/142 (43.66%), Postives = 98/142 (69.01%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYKQ 440 +L+ + V+YYG+P L +A +N P+ + I+P++KS LK IEKA+ ++LG+ P NDGE+IRL P LT ERRK+++K V + EE KV +RN+RRDA + + K+KK++ED+ K ++ +QK TD + ++D I K+ Sbjct: 36 ILEGVRVDYYGTPTPLSGVASVNAPEPRLITIKPWEKSVLKDIEKALREANLGINPMNDGEMIRLPFPPLTEERRKDIAKQVKTKGEEFKVTIRNLRRDANEVLKTQLKDKKITEDDHKRITEVVQKQTDAGITQVDEIVKK 177
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_GEOBB (Ribosome-recycling factor OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=frr PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.414e-30 Identity = 61/139 (43.88%), Postives = 97/139 (69.78%), Query Frame = 3 Query: 15 MLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +LD I+V+ YG+ L +A + P++ ++ I P+D + IEKAI++S+LG+ P NDG++IRLTLP LT ERRK++ K + + AE+ KVA+RNIRRDA+ +KL+K+K +SED K ++Q T+ ++ K+D + Sbjct: 36 LLDDIKVDSYGTLSPLNQVATLAIPEARTITISPWDSKMIAPIEKAIMNSNLGLNPANDGKMIRLTLPPLTEERRKDIVKQLKRDAEDAKVALRNIRRDAIDQLKKLEKDKSISEDEQKRAEKEVQDFTNSHVAKVDEV 174 The following BLAST results are available for this feature:
BLAST of CF832536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832536 ID=CF832536; Name=CF832536; organism=Citrus sinensis; type=EST; length=651bpback to top |