CF832536
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_STRE4 (Ribosome-recycling factor OS=Streptococcus equi subsp. equi (strain 4047) GN=frr PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.571e-37 Identity = 75/141 (53.19%), Postives = 104/141 (73.76%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKID 425 +N +LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K E KV++RNIRRDA+ +K +K K+++ED +K L D+QK TDE +K+ID Sbjct: 32 ANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKKVGETAKVSIRNIRRDAMDEAKKQEKAKEITEDELKALEKDIQKATDEAVKEID 172
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACCR (Ribosome-recycling factor OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=frr PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.571e-37 Identity = 73/145 (50.34%), Postives = 107/145 (73.79%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +N +LDK++V+YYG+P + +A I P++ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KVAVRN+RRD +KL+K +++ED+++ + D+QK TD+Y+ K+D I K Sbjct: 32 ANASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACC7 (Ribosome-recycling factor OS=Bacillus cereus (strain AH187) GN=frr PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.571e-37 Identity = 73/145 (50.34%), Postives = 107/145 (73.79%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +N +LDK++V+YYG+P + +A I P++ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KVAVRN+RRD +KL+K +++ED+++ + D+QK TD+Y+ K+D I K Sbjct: 32 ANASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACC4 (Ribosome-recycling factor OS=Bacillus cereus (strain B4264) GN=frr PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.571e-37 Identity = 73/145 (50.34%), Postives = 107/145 (73.79%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +N +LDK++V+YYG+P + +A I P++ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KVAVRN+RRD +KL+K +++ED+++ + D+QK TD+Y+ K+D I K Sbjct: 32 ANASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_BACC1 (Ribosome-recycling factor OS=Bacillus cereus (strain ATCC 10987) GN=frr PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.571e-37 Identity = 73/145 (50.34%), Postives = 107/145 (73.79%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSIYK 437 +N +LDK++V+YYG+P + +A I P++ L+IQPYDK+S+ IEKAI+ +DLG+ P+NDG VIR+ P LT ERR++L KVV K AEE KVAVRN+RRD +KL+K +++ED+++ + D+QK TD+Y+ K+D I K Sbjct: 32 ANASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAK 176
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CLOBK (Ribosome-recycling factor OS=Clostridium botulinum (strain Okra / Type B1) GN=frr PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.052e-37 Identity = 77/143 (53.85%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP MLD+IE EYYGS L + I+ P++ LLIQP+DKS+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KVA+R+IRRD + L+K+ +SED++K D+QK TD+Y+K+IDSI Sbjct: 32 ANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVLLIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAKVAIRSIRRDCNDDVKNLKKD-DVSEDDIKKAEDDIQKKTDKYIKEIDSI 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CLOBJ (Ribosome-recycling factor OS=Clostridium botulinum (strain Kyoto / Type A2) GN=frr PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.052e-37 Identity = 77/143 (53.85%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP MLD+IE EYYGS L + I+ P++ LLIQP+DKS+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KVA+R+IRRD + L+K+ +SED++K D+QK TD+Y+K+IDSI Sbjct: 32 ANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVLLIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAKVAIRSIRRDCNDDVKNLKKD-DVSEDDIKKAEDDIQKKTDKYIKEIDSI 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_CLOB6 (Ribosome-recycling factor OS=Clostridium botulinum (strain 657 / Type Ba4) GN=frr PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.052e-37 Identity = 77/143 (53.85%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP MLD+IE EYYGS L + I+ P++ LLIQP+DKS+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K EE KVA+R+IRRD + L+K+ +SED++K D+QK TD+Y+K+IDSI Sbjct: 32 ANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVLLIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKKTGEEAKVAIRSIRRDCNDDVKNLKKD-DVSEDDIKKAEDDIQKKTDKYIKEIDSI 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_THEPX (Ribosome-recycling factor OS=Thermoanaerobacter sp. (strain X514) GN=frr PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.681e-37 Identity = 75/143 (52.45%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP +LD+I V+YYG+P L +A I P+ L++QP+D S + IEKAI SDLG+ P +DG+V+RL P+LT ERRKEL K+V K+AEE KVAVR IRRDA A +K++K ++SED K ++QKLTD+Y+K+ID + Sbjct: 31 ANPALLDRIMVDYYGTPTPLNRLATITAPEPRVLVVQPWDVSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAKVAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKV 173
BLAST of CF832536 vs. ExPASy Swiss-Prot
Match: RRF_THEP3 (Ribosome-recycling factor OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=frr PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.681e-37 Identity = 75/143 (52.45%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 3 SNPVMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQKEKKLSEDNVKDLSSDLQKLTDEYMKKIDSI 431 +NP +LD+I V+YYG+P L +A I P+ L++QP+D S + IEKAI SDLG+ P +DG+V+RL P+LT ERRKEL K+V K+AEE KVAVR IRRDA A +K++K ++SED K ++QKLTD+Y+K+ID + Sbjct: 31 ANPALLDRIMVDYYGTPTPLNRLATITAPEPRVLVVQPWDVSKISDIEKAIQKSDLGINPVSDGKVLRLVFPELTEERRKELVKLVHKKAEEAKVAVRQIRRDANDAVKKMEKNGEISEDERKKREEEIQKLTDKYIKEIDKV 173 The following BLAST results are available for this feature:
BLAST of CF832536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832536 ID=CF832536; Name=CF832536; organism=Citrus sinensis; type=EST; length=651bpback to top |