CF832555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_BORBU (50S ribosomal protein L2 OS=Borrelia burgdorferi GN=rplB PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.980e-20 Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 +K I+ +G+ G + G A + +GN LP+ +IP G V N+E +VG G L R++G YA+I++ D + VKL SG ++I C A IG++ + KAG + ++ +R PKVRGVAMNPV+HPHGGG + G Sbjct: 102 EKRYIISPKGIKVGDVLESGPNAPIKIGNALPLENIPIGRTVHNIELNVGKGGQLIRSAGGYAMILA--SDGNYVTVKLSSGEMRLIFKKCIATIGEIGNEDYANISIGKAGKS--RWLGRR---PKVRGVAMNPVDHPHGGGEGKTSG 243
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RK2_PELHO (50S ribosomal protein L2, chloroplastic OS=Pelargonium hortorum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.980e-20 Identity = 58/143 (40.56%), Postives = 81/143 (56.64%), Query Frame = -2 Query: 380 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 808 +K + G G + G + + +GN LP+ +IP G + N+E +G G LARA+G A +IS + + VKLPSG ++I C A +GQV G K L +AG+ ++ KR P VRGVAMNPV+HPHGGG Sbjct: 98 EKRYILHPRGARIGDTIVSGTEVPIKMGNALPLTNIPLGTAIHNIEITLGKGGQLARAAGAVAKLIS--KEGKSAAVKLPSGEVRLISQNCSATVGQVGNVGVNRKSLGRAGS--KRWLGKR---PVVRGVAMNPVDHPHGGG 233
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_SODGM (50S ribosomal protein L2 OS=Sodalis glossinidius (strain morsitans) GN=rplB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20 Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +A +G+ G+ + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + I S CRA +G+V + L KAG + R P VRG AMNPV+HPHGGG ++ G Sbjct: 100 ERRYILAPKGLKAGEQIQSGVDAAIKAGNALPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGAYVTLRLRSGEMRKIQSECRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_SHEWM (50S ribosomal protein L2 OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=rplB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20 Identity = 56/149 (37.58%), Postives = 83/149 (55.70%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +AA+GM G + G A + VGN LP+R+IP G+VV VE G +AR++G Y +++ D + ++L SG + +P CRA +G+V + L KAG + R P VRGVAMNP++HPHGGG + G Sbjct: 100 ERRYILAAKGMQAGDKIQSGIDAEIKVGNALPLRNIPVGSVVHAVEMKPGKGAQIARSAGTYVQVVAR--DGEYATLRLRSGEMRKVPVDCRATMGEVGNAEHMLRQLGKAG-----AKRWRGVRPTVRGVAMNPIDHPHGGGEGRTSG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_SHESH (50S ribosomal protein L2 OS=Shewanella sediminis (strain HAW-EB3) GN=rplB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20 Identity = 57/149 (38.26%), Postives = 83/149 (55.70%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +AA+GM G + G A + VGN LP+R+IP G+VV VE G +AR++G Y +++ D + ++L SG + +P CRA +G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 100 ERRYILAAKGMQAGDPIQSGIDAEIKVGNALPLRNIPIGSVVHAVEMKPGKGAQIARSAGTYVQVVAR--DGEYATLRLRSGEMRKVPVDCRATLGEVGNAEHMLRQLGKAG-----AKRWRGVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_CHLT3 (50S ribosomal protein L2 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=rplB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.586e-20 Identity = 58/167 (34.73%), Postives = 88/167 (52.69%), Query Frame = -2 Query: 320 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 808 +K +A G+ G + CG +A + VGN LP+++IP G V N+E G G +AR++G YAV+++ + D +K+PSG + + C+A +G + G E L G A R+ W P+ RG+AMNPV+HP GGG + +P GQK Sbjct: 100 EKRYILAPNGIKVGDLIECGPEADIKVGNALPLKNIPVGIEVHNIEMRPGKGGQMARSAGSYAVLVA--KEGDYATLKMPSGELRKVRVECKATVGVI---GNLEHENLSLGKA------GRSRWLGIRPQTRGMAMNPVDHPMGGGEGKSKSGGGRKHPKSPWGQK 255
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_SALTY (50S ribosomal protein L2 OS=Salmonella typhimurium GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 100 ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_SALTI (50S ribosomal protein L2 OS=Salmonella typhi GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 100 ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_SALSV (50S ribosomal protein L2 OS=Salmonella schwarzengrund (strain CVM19633) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 100 ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_SALPK (50S ribosomal protein L2 OS=Salmonella paratyphi A (strain AKU_12601) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 100 ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241 The following BLAST results are available for this feature:
BLAST of CF832555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832555 ID=CF832555; Name=CF832555; organism=Citrus sinensis; type=EST; length=815bpback to top |