CF832555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_PHOLL (50S ribosomal protein L2 OS=Photorhabdus luminescens subsp. laumondii GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 56/149 (37.58%), Postives = 82/149 (55.03%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +A +G+ G + G A++ GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + S CRA +G+V + L KAG + R P VRG AMNPV+HPHGGG ++ G Sbjct: 100 ERRYILAPKGLKAGDQIQSGVDASIKTGNALPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGSYVTLRLRSGEMRKVLSDCRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_PELPD (50S ribosomal protein L2 OS=Pelobacter propionicus (strain DSM 2379) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 59/149 (39.60%), Postives = 87/149 (58.39%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 +K +A + G V G +A + GN LP+++IP G ++ NVE +G LAR++G +A +++ + ++VKLPSG +++ C A IGQV + L KAG A ++ KR PKVRGVAMNPV+HPHGGG + G Sbjct: 100 EKRYILAPLDLKVGDTVLSGPEADIKPGNALPLKAIPLGTIIHNVELKLGKGAQLARSAGTFAQLMA--KEGRYSQVKLPSGEVRMVLQDCYATIGQVGNVDHEKVSLGKAGRA--RWLGKR---PKVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_KLEP7 (50S ribosomal protein L2 OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 100 ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_KLEP3 (50S ribosomal protein L2 OS=Klebsiella pneumoniae (strain 342) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 100 ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_GEOUR (50S ribosomal protein L2 OS=Geobacter uraniireducens (strain Rf4) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 58/149 (38.93%), Postives = 85/149 (57.05%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 +K IA + G V G A + GN LP+RSIP G ++ N+E +G LAR++G +A +++ ++ +VKLPSG +++ C A +GQV + KAG + ++ KR PKVRGVAMNPV+HPHGGG + G Sbjct: 100 EKRYIIAPLDLKVGDTVISGPSADIKPGNALPIRSIPLGTIIHNIELKIGKGAQLARSAGTFAQLMA--KEDKYAQVKLPSGEVRMVLLDCIATVGQVGNIDHENVSIGKAGRS--RWLGKR---PKVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_ERWT9 (50S ribosomal protein L2 OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G +AR++G Y I++ T R++ SG + + S CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 100 ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQIARSAGTYVQIVAREGSYVTLRLR--SGEMRKVESDCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_ENT38 (50S ribosomal protein L2 OS=Enterobacter sp. (strain 638) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 56/149 (37.58%), Postives = 81/149 (54.36%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG A R P VRG AMNPV+HPHGGG ++ G Sbjct: 100 ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVAR--DGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARW-----RGIRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_DESAP (50S ribosomal protein L2 OS=Desulforudis audaxviator (strain MP104C) GN=rplB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.377e-20 Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = -2 Query: 380 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 808 +K +A G+ GQ + G +A + VGN LP+R+IP G ++ N+E + G + R++G A +++ + D V+LPSG ++ P CRA IGQV + KAG A P VRGV MNPV+HPHGGG Sbjct: 100 EKRYIVAPAGLKVGQEIMSGPQADIKVGNALPLRNIPPGVLIHNIELYPGHGARVVRSAGGSAQLMA--KEGDYAHVRLPSGEVRLFPLDCRATIGQVGNVEHENIVIGKAGRARW-----LGIRPTVRGVVMNPVDHPHGGG 235
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RK2_CUCSA (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.410e-20 Identity = 54/147 (36.73%), Postives = 78/147 (53.06%), Query Frame = -2 Query: 380 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 808 +K + G G + G + + +GN LP+ +P G + N+E +G G LARA+G A +I+ + + +KLPSG ++I C A +GQV G +K L +AG+ CW P VRGV MNPV+HPHGGG Sbjct: 98 EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGG 233
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_YERPY (50S ribosomal protein L2 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=rplB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.760e-20 Identity = 55/149 (36.91%), Postives = 81/149 (54.36%), Query Frame = -2 Query: 362 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 808 ++ +A +G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG + R P VRG AMNPV+HPHGGG ++ G Sbjct: 100 ERRYILAPKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGSYVTLRLRSGEMRKVQADCRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGGGEGRNFG 241 The following BLAST results are available for this feature:
BLAST of CF832555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832555 ID=CF832555; Name=CF832555; organism=Citrus sinensis; type=EST; length=815bpback to top |