CF832555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_PYRIL (50S ribosomal protein L2P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl2p PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.971e-36 Identity = 79/162 (48.77%), Postives = 101/162 (62.35%), Query Frame = -2 Query: 314 LFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 799 L AAEG+Y GQ + G A GN++ + +PEG +V NVE GD G ARA G YAV++ P+ + T ++LPSG + S RA +G VAGGGR EKP LKAG YH+ + K +P VRG AM+P HPHGGG+H G + V + APPGQKVG Sbjct: 67 LNFAAEGLYVGQEIEVGDLAAPKTGNIVILGRVPEGTMVFNVEKRAGDGGKFARAGGTYAVVVGQKPEENKTIIRLPSGKVVEVDSRGRATVGIVAGGGRIEKPFLKAGKKYHRAKAKAWKYPTVRGKAMSPYAHPHGGGSHPKGG--TPVPKTAPPGQKVG 226
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_NITMS (50S ribosomal protein L2P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.277e-35 Identity = 73/161 (45.34%), Postives = 100/161 (62.11%), Query Frame = -2 Query: 308 AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 790 A G G+ + G K+ + GNV+ +++IP+G +VCN+E H GD G + +++G A + SH + T VKLPSG + RAMIG +AGGG +E+P + AG + F+ K +P VRGVA HPHGGG HQH+G +STV RD PPG KVG I Sbjct: 72 AVLGAKVGETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVKSAGTDATVFSHGDEGVT--VKLPSGKFTTLNPKNRAMIGTLAGGGASERPFMSAGGKWRNFKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRDTPPGAKVGSI 230
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_METHJ (50S ribosomal protein L2P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl2p PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.339e-35 Identity = 75/162 (46.30%), Postives = 95/162 (58.64%), Query Frame = -2 Query: 308 IAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 793 + EGM G + G A + GN LP++ IP G+ VCN+E + D G RASG A + V++PSG+ K CRA IG VAGGGR+EKP +KAG YHK + + WP+VRG AMN ++HP GGG HQH G TV R PG+KVG I Sbjct: 69 LVTEGMGIGDVLTWGADAEIRNGNTLPLQEIPTGSSVCNIEAYPNDGGKFVRASGVQATVTDKMEGR--VAVRMPSGSTKWFNGQCRATIGIVAGGGRSEKPFVKAGKKYHKMKNTASNWPRVRGFAMNVIDHPFGGGGHQHAGRPKTVSRGTSPGRKVGHI 228
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_METB6 (50S ribosomal protein L2P OS=Methanoregula boonei (strain 6A8) GN=rpl2p PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.279e-35 Identity = 73/164 (44.51%), Postives = 98/164 (59.76%), Query Frame = -2 Query: 314 KELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 805 K + EG+ G+ V G + GN LP++SIP G+ +CN+E D G R++G AV++ + D V++PSG K + CRA +G VAGGGR EKP +KAGN HK R + WP+VRGVAMN ++HP GGG HQH G T+ R PG+ VG Sbjct: 65 KVYILVTEGIGIGETVAWGADVKVKNGNTLPLQSIPTGSYICNIESRPNDGGKFVRSTGVQAVVV--DKIGDRIGVRMPSGKTKWFNARCRATVGIVAGGGRVEKPFVKAGNKSHKMRNTASNWPRVRGVAMNVIDHPFGGGGHQHPGRPKTIARGTSPGRTVG 226
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_CENSY (50S ribosomal protein L2P OS=Cenarchaeum symbiosum GN=rpl2p PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.366e-34 Identity = 73/161 (45.34%), Postives = 98/161 (60.87%), Query Frame = -2 Query: 308 AAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 790 A G G + G K+ + GNV+ V++IP+G VCNVE H GD G + +++G A + SH +KLPSG + RAM+G +AGGG +E+P + AG + +FR K +P VRGVA HPHGGG HQH+G +STV R+APPG KVG I Sbjct: 71 AVLGTRVGSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVKSAGGNATVFSHGEGGVV--LKLPSGRFSTLNPKNRAMVGTLAGGGVSERPFMSAGGKWRRFRSKGRKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRNAPPGAKVGSI 229
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_METMJ (50S ribosomal protein L2P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.663e-33 Identity = 72/165 (43.64%), Postives = 93/165 (56.36%), Query Frame = -2 Query: 314 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 808 +K +A EG+ G V G T+ GN LP+ IP GA VCN+E D G R+SG A++I D+ +++PSG K C A +G VAGGGR EKP +KAG + R WP+V+GV MN ++HP GGG HQH G TV R PG+KVG Sbjct: 64 EKIYVLATEGLGVGDTVSWGTGGTVKNGNTLPLGEIPVGAYVCNIEARPNDGGKFVRSSGVQALVIG-KADDGRVGIRMPSGKNKWFNGACMATVGIVAGGGRGEKPFVKAGKKHFHVRSSSERWPRVKGVCMNVIDHPFGGGGHQHCGRPKTVARGTSPGRKVG 227
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_THEVO (50S ribosomal protein L2P OS=Thermoplasma volcanium GN=rpl2p PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.478e-33 Identity = 73/160 (45.62%), Postives = 95/160 (59.38%), Query Frame = -2 Query: 314 IAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 793 IA G Y GQ + G T+ G + +IP+G+ V N+E GD G R++G +A+++SH +KLPSG+ + CRA +G VA G + P+LKAG H R K VRGVAMN V HPHGGGNHQH+G STV R+APPG+KVG Sbjct: 65 IAFTGAYVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSHG---SRVTLKLPSGSMRDFDPRCRATVGVVAASGIIDAPILKAGTHVHYLRSKAKRPYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPPGRKVG 221
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_THEPD (50S ribosomal protein L2P OS=Thermofilum pendens (strain Hrk 5) GN=rpl2p PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.322e-32 Identity = 75/166 (45.18%), Postives = 104/166 (62.65%), Query Frame = -2 Query: 308 KELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 805 K I EG+ GQ +Y G KA ++G+++ + ++PEG +V N+E GD G LAR+SG YA++++H+ N T ++LPS K + S RA IG VA GGR EKP+LKAG +H R K +P VRG AM+ HP GGG+H + R+APPG+KVG I Sbjct: 70 KMYMIPPEGLAVGQKIYYGAKAPAVLGSIVEIGNVPEGTIVSNIEIRPGDGGKLARSSGAYALVLAHS--NGKTLIQLPSKKVKEVSSEARATIGMVAAGGRIEKPMLKAGKMWHWSRAKSFKYPTVRGKAMSAYAHPAGGGHHPK--GLTPAPRNAPPGRKVGHI 231
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_THEAC (50S ribosomal protein L2P OS=Thermoplasma acidophilum GN=rpl2p PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.560e-32 Identity = 72/165 (43.64%), Postives = 96/165 (58.18%), Query Frame = -2 Query: 314 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 808 +K IA G + GQ + G ++ G + +IP+G+ V N+E GD G R++G +A+++SH +KLPSG + CRA +G VA G + P+LKAG H R K VRGVAMN V HPHGGGNHQH+G STV R+APPG+KVG Sbjct: 60 KKAYQIAFTGAFVGQNIVAGNVDSVSPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSHGQH---VTLKLPSGRMRDFDPRCRATLGVVAASGIKDPPILKAGTHVHYLRSKAKRPYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPPGRKVG 221
BLAST of CF832555 vs. ExPASy Swiss-Prot
Match: RL2_PICTO (50S ribosomal protein L2P OS=Picrophilus torridus GN=rpl2p PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.493e-31 Identity = 73/165 (44.24%), Postives = 95/165 (57.58%), Query Frame = -2 Query: 314 QKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 808 +K IA G Y Q ++ G + +G+V + +IP+G+ V N+E GD G RA+G A++ISH +KLPSG K CRA +G +AG G + P+LKAG + K VRGVAMN V HPHGGGNHQH+G STV R PPG+KVG Sbjct: 60 EKNYMIAFNGAYVNQEIHVGDIDSPAIGDVTYLANIPDGSYVYNIESIPGDGGKFCRAAGTAALVISHGA---YVSLKLPSGVNKEFHPRCRATVGFIAGSGARDIPILKAGTHIKYLQSKAKRPYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRGTPPGRKVG 221 The following BLAST results are available for this feature:
BLAST of CF832555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832555 ID=CF832555; Name=CF832555; organism=Citrus sinensis; type=EST; length=815bpback to top |