CF832573

Overview
NameCF832573
Unique NameCF832573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:241..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_HERA2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=metE PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.756e-56
Identity = 112/195 (57.44%), Postives = 140/195 (71.79%), Query Frame = -2 
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            SFVR+D PR     QI LA++DEV DLE AGIN+IQIDE A REGLPLR+++   YLDWAV +FRI     + +TQIHTHMCYS+FNDII +I  +DADVI+IE++RS   LL+   EG +Y   IGPGVYDIHSP IP+ E++  R+ ++L  L    LW+NPDCGLKTR Y EV  AL  MV A K +R Q++
Sbjct:  556 SFVRDDLPRSAVAAQIGLALRDEVTDLEAAGINIIQIDEPAFREGLPLRRNDWQNYLDWAVRAFRIATSDAKPSTQIHTHMCYSDFNDIIAAIAALDADVISIEDARSAGSLLAGL-EG-RYTQQIGPGVYDIHSPNIPTVEQLVARMRQLLNYLPAEQLWINPDCGLKTRTYAEVAAALQAMVTATKQVRNQIS 748
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BURP6 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 668) GN=metE PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.599e-56
Identity = 116/197 (58.88%), Postives = 138/197 (70.05%), Query Frame = -2 
Query:  197 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 787
            SFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F E   Y   IGPGVYDIHSPR+P  +EI   I   L  +    LWVNPDCGLKTR++ +V  AL+ MV AAK +R ++  A
Sbjct:  566 SFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF-ETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIPAQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKVEEA 761
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BURP1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 1710b) GN=metE PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.599e-56
Identity = 116/197 (58.88%), Postives = 138/197 (70.05%), Query Frame = -2 
Query:  197 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 787
            SFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F E   Y   IGPGVYDIHSPR+P  +EI   I   L  +    LWVNPDCGLKTR++ +V  AL+ MV AAK +R ++  A
Sbjct:  566 SFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF-ETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIPAQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKVEEA 761
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BURP0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia pseudomallei (strain 1106a) GN=metE PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.599e-56
Identity = 116/197 (58.88%), Postives = 138/197 (70.05%), Query Frame = -2 
Query:  197 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 787
            SFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F E   Y   IGPGVYDIHSPR+P  +EI   I   L  +    LWVNPDCGLKTR++ +V  AL+ MV AAK +R ++  A
Sbjct:  566 SFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF-ETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIPAQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKVEEA 761
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BURMS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain SAVP1) GN=metE PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.599e-56
Identity = 116/197 (58.88%), Postives = 138/197 (70.05%), Query Frame = -2 
Query:  197 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 787
            SFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F E   Y   IGPGVYDIHSPR+P  +EI   I   L  +    LWVNPDCGLKTR++ +V  AL+ MV AAK +R ++  A
Sbjct:  566 SFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF-ETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIPAQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKVEEA 761
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BURMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei GN=metE PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.599e-56
Identity = 116/197 (58.88%), Postives = 138/197 (70.05%), Query Frame = -2 
Query:  197 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 787
            SFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F E   Y   IGPGVYDIHSPR+P  +EI   I   L  +    LWVNPDCGLKTR++ +V  AL+ MV AAK +R ++  A
Sbjct:  566 SFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF-ETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIPAQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKVEEA 761
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BURM9 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain NCTC 10229) GN=metE PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.599e-56
Identity = 116/197 (58.88%), Postives = 138/197 (70.05%), Query Frame = -2 
Query:  197 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 787
            SFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F E   Y   IGPGVYDIHSPR+P  +EI   I   L  +    LWVNPDCGLKTR++ +V  AL+ MV AAK +R ++  A
Sbjct:  566 SFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF-ETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIPAQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKVEEA 761
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BURM7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia mallei (strain NCTC 10247) GN=metE PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.599e-56
Identity = 116/197 (58.88%), Postives = 138/197 (70.05%), Query Frame = -2 
Query:  197 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 787
            SFVR+DQPR  T  QIALA++ E  DLEKAGI +IQIDE ALREGLPL+  E A YLDWAV +F I   GV D TQIHTHMCYS F DI+ SI  +DADVI+IE +RS+ +LL  F E   Y   IGPGVYDIHSPR+P  +EI   I   L  +    LWVNPDCGLKTR++ +V  AL+ MV AAK +R ++  A
Sbjct:  566 SFVRDDQPRATTALQIALALRQETLDLEKAGIGMIQIDEPALREGLPLKARERAAYLDWAVRAFGIAASGVADDTQIHTHMCYSEFGDILPSIAALDADVISIETTRSNMELLDAF-ETFDYPNEIGPGVYDIHSPRVPDADEIERLILLALERIPAQRLWVNPDCGLKTREWRQVDAALAAMVDAAKRVRQKVEEA 761
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_LACPL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactobacillus plantarum GN=metE PE=3 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.700e-56
Identity = 111/197 (56.35%), Postives = 143/197 (72.59%), Query Frame = -2 
Query:  197 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 787
            SFVR+D PR +   QIALA++ EV++LEKAGI +IQ+DE ALREGLPL++     YLD AV+SF+IT  GVQ+ TQIHTHMCYSNF DII++I  +DADVI+IE SRS  +++S F E   Y   IG GVYDIHSPR+PS  EI   I + L V++    W+NPDCGLKTR+ +E   AL NM+AA   ++ QL ++
Sbjct:  571 SFVRDDIPRAQVQNQIALALRQEVQNLEKAGIKIIQVDEPALREGLPLKQRHWQAYLDEAVYSFKITTTGVQNDTQIHTHMCYSNFADIINTIKALDADVISIETSRSHGEIISAF-EQTGYDQEIGLGVYDIHSPRVPSVAEIEANIQRALRVIDARQFWINPDCGLKTRQESETLAALKNMIAARNAIQAQLTTS 766
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_VIBHB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=metE PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.139e-56
Identity = 110/195 (56.41%), Postives = 138/195 (70.77%), Query Frame = -2 
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            +F R D  R E   Q+ALA++DEV DL+ +GIN+IQIDE A+REGLPL+K +H  YL WAV +F+I+    +  TQIHTHMCYS FN+II S+  +DADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP IP+ E I   + K    +    LWVNPDCGLKTR + E + AL+N+V+AAK LRT+LA
Sbjct:  567 TFPREDITRKEIAEQLALALRDEVSDLQDSGINIIQIDEPAIREGLPLKKRDHDAYLQWAVDAFKISAASAKPETQIHTHMCYSEFNEIIDSVAALDADVITIETSRSNMELLKAF-EAFNYPNEIGPGVYDIHSPNIPTQEWIEALLKKAAEKVPVQRLWVNPDCGLKTRNWDETEAALANLVSAAKKLRTELA 760
The following BLAST results are available for this feature:
BLAST of CF832573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
METE_HERA22.756e-5657.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP63.599e-5658.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP13.599e-5658.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURP03.599e-5658.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURMS3.599e-5658.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURMA3.599e-5658.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURM93.599e-5658.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURM73.599e-5658.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACPL4.700e-5656.355-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_VIBHB6.139e-5656.415-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832573 ID=CF832573; Name=CF832573; organism=Citrus sinensis; type=EST; length=788bp
TTTTTTTTTTTTTTTAGAAAATAGAAGCCAATTGCTCAATAGTGCATAAT
ATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTATTCGAATAG
GTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAAAAAAAAAA
TCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTCACTTGGCA
CTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATGTTTGAGAG
GGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACAGTCAGGGT
TAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGTTGATTCTG
TCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATGTCATACAC
ACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCACGGAAGACAGACA
GGAGCTTCTCATCAGAACGAGAGTTCTCAATGGTGATCACATCAGCATCC
ATGTCGATAATTGAGTGGATAATGTCGTTGAAGTTGGAGTAGCACATGTG
GGTGTGGATCTGGGTAGTGTCCTGGACGCCACAGTTGGTGATTCTGAAGG
AGTGGACTGCCCAGTCCAAGTAGAAAGCATGCTCAGATTTCCTAAGAGGC
AATCCTTCCCTCAAGGCAGCCTCATCAATTTGAATAACGTTAATGCCTGC
CTTCTCAAGATCCTCGACTTCGTCCTTGATGGCCAAAGCAATCTGGTAGC
AGGTTTCATGTCTGGGCTGGTCATTTCTAACAAAGGAC
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