CF832573

Overview
NameCF832573
Unique NameCF832573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:241..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_MYCTU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis GN=metE PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.333e-55
Identity = 107/191 (56.02%), Postives = 137/191 (71.73%), Query Frame = -2 
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQP  +T  Q+ALAI+DE  DL+ AGI VIQ+DE ALRE LPLR+++ A YL WAV +FR+   GV D TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L      + +  G+GPGVYDIHSPR+PS EE+AD +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  568 SFVRDDQPLADTANQVALAIRDETVDLQSAGIAVIQVDEPALRELLPLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDL-NAIGFANGVGPGVYDIHSPRVPSAEEMADSLRAALRAVPAERLWVNPDCGLKTRNVDEVTASLHNMVAAAREVR 757
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_MYCTA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=metE PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.333e-55
Identity = 107/191 (56.02%), Postives = 137/191 (71.73%), Query Frame = -2 
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQP  +T  Q+ALAI+DE  DL+ AGI VIQ+DE ALRE LPLR+++ A YL WAV +FR+   GV D TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L      + +  G+GPGVYDIHSPR+PS EE+AD +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  568 SFVRDDQPLADTANQVALAIRDETVDLQSAGIAVIQVDEPALRELLPLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDL-NAIGFANGVGPGVYDIHSPRVPSAEEMADSLRAALRAVPAERLWVNPDCGLKTRNVDEVTASLHNMVAAAREVR 757
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_MYCBP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=metE PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.333e-55
Identity = 107/191 (56.02%), Postives = 137/191 (71.73%), Query Frame = -2 
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQP  +T  Q+ALAI+DE  DL+ AGI VIQ+DE ALRE LPLR+++ A YL WAV +FR+   GV D TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L      + +  G+GPGVYDIHSPR+PS EE+AD +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  568 SFVRDDQPLADTANQVALAIRDETVDLQSAGIAVIQVDEPALRELLPLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDL-NAIGFANGVGPGVYDIHSPRVPSAEEMADSLRAALRAVPAERLWVNPDCGLKTRNVDEVTASLHNMVAAAREVR 757
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_MYCBO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mycobacterium bovis GN=metE PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.333e-55
Identity = 107/191 (56.02%), Postives = 137/191 (71.73%), Query Frame = -2 
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQP  +T  Q+ALAI+DE  DL+ AGI VIQ+DE ALRE LPLR+++ A YL WAV +FR+   GV D TQIHTH+CYS F ++I +I D+DADV +IE +RS  ++L      + +  G+GPGVYDIHSPR+PS EE+AD +   L  +    LWVNPDCGLKTR   EV  +L NMVAAA+ +R
Sbjct:  568 SFVRDDQPLADTANQVALAIRDETVDLQSAGIAVIQVDEPALRELLPLRRADQAEYLRWAVGAFRLATSGVSDATQIHTHLCYSEFGEVIGAIADLDADVTSIEAARSHMEVLDDL-NAIGFANGVGPGVYDIHSPRVPSAEEMADSLRAALRAVPAERLWVNPDCGLKTRNVDEVTASLHNMVAAAREVR 757
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_STRGG (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=metE PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.047e-55
Identity = 110/196 (56.12%), Postives = 138/196 (70.41%), Query Frame = -2 
Query:  206 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYG--AGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 787
            SFVR+DQP  +T  Q+ALA++DEV DLE  G +VIQ+DE ALRE LPLR +EHA YL+WA  SFRI   GV+  TQIHTHMCY+ F DI+ +I D+DADVI++E +RS    + V RE   +G     GPGVYDIHSPRIP  EE A  + K L  +    LWVNPDCGLKTR + E + +L N+VAAA+ +R +L
Sbjct:  577 SFVRDDQPLGDTARQVALALRDEVNDLEANGTSVIQVDEPALRETLPLRAAEHAAYLEWATESFRIATSGVRPDTQIHTHMCYAEFGDIVQAIDDLDADVISLEAARSH---MQVARELAAHGYPREAGPGVYDIHSPRIPGAEEAAALLRKGLEAIPAERLWVNPDCGLKTRGWPETRASLENLVAAARQIRAEL 769
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BACP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=metE PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.047e-55
Identity = 112/195 (57.44%), Postives = 140/195 (71.79%), Query Frame = -2 
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            SF R D  R +  +QIA A++ EVE LE+AGI VIQ+DE ALREGLPL++S+ A YL+WA  SFR++   VQ+ TQIHTHMCYSNF DI+ +I D+DADVITIE+SRS    L  + E   Y  G+G GVYDIHSPR+PS EE++  I+  L V  T+  WVNPDCGLKTR+  E   AL NMV AA++ R +LA
Sbjct:  566 SFPRTDISRKDIAFQIAFALRKEVEALEEAGIQVIQVDEPALREGLPLKESDWADYLNWAAESFRLSTSSVQNETQIHTHMCYSNFEDIVDTIEDLDADVITIEHSRSHGGFLD-YLEKHPYLKGLGLGVYDIHSPRVPSVEEMSQIIDDALNVCPTDRFWVNPDCGLKTRQEPETIAALKNMVTAAEVARKKLA 759
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_STAES (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=metE PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.197e-55
Identity = 115/196 (58.67%), Postives = 135/196 (68.88%), Query Frame = -2 
Query:  200 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 787
            SF R D PR     QIALAI +EV  LE+AGI VIQ+DE ALREGLPLR   H  YL+ AVHSF++    V D TQIHTHMCYS F  IIH+I D+DADVI+IE SRS   L+  F E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +  S
Sbjct:  551 SFERVDVPRKVVQDQIALAIDEEVLALEEAGIKVIQVDEPALREGLPLRSEYHEQYLEDAVHSFKLATSSVHDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIQDF-EDINYDLGIGLGVYDIHSPRIPTEEEITTAINRSLQQIDRSLFWVNPDCGLKTRKENEVKDALTVLVNAVKKKRQESES 745
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_STAEQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metE PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.197e-55
Identity = 115/196 (58.67%), Postives = 135/196 (68.88%), Query Frame = -2 
Query:  200 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 787
            SF R D PR     QIALAI +EV  LE+AGI VIQ+DE ALREGLPLR   H  YL+ AVHSF++    V D TQIHTHMCYS F  IIH+I D+DADVI+IE SRS   L+  F E + Y  GIG GVYDIHSPRIP+ EEI   IN+ L  ++ ++ WVNPDCGLKTRK  EVK AL+ +V A K  R +  S
Sbjct:  551 SFERVDVPRKVVQDQIALAIDEEVLALEEAGIKVIQVDEPALREGLPLRSEYHEQYLEDAVHSFKLATSSVHDETQIHTHMCYSQFGQIIHAIHDLDADVISIETSRSHGDLIQDF-EDINYDLGIGLGVYDIHSPRIPTEEEITTAINRSLQQIDRSLFWVNPDCGLKTRKENEVKDALTVLVNAVKKKRQESES 745
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BIFLO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum GN=metE PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.197e-55
Identity = 114/195 (58.46%), Postives = 137/195 (70.26%), Query Frame = -2 
Query:  206 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 787
            S+ R D    E   Q+ALAI+DEV DLE AGI VIQIDEAALRE LPLRKS+ H  YLDWAV +FR+ +  V+ TTQIHTHMCYS FNDII  I  MDADVI+ E SR D  +L    +   +    GPGVYDIHSPRIPS +EI DRI ++L  ++   +W+NPDCGLKTR   E  P+L N+VAAAK +R +L
Sbjct:  572 SWPREDITHEEQTKQLALAIRDEVLDLEAAGIKVIQIDEAALREKLPLRKSDWHVKYLDWAVPAFRLVHSAVKPTTQIHTHMCYSEFNDIIRDIDAMDADVISFEASRGDLVVLDAIHDA-HFETEAGPGVYDIHSPRIPSEKEIEDRIYEILDKMDVKKVWINPDCGLKTRGNAETWPSLENLVAAAKAVRAKL 765
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BIFLD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bifidobacterium longum (strain DJO10A) GN=metE PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.197e-55
Identity = 114/195 (58.46%), Postives = 137/195 (70.26%), Query Frame = -2 
Query:  206 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 787
            S+ R D    E   Q+ALAI+DEV DLE AGI VIQIDEAALRE LPLRKS+ H  YLDWAV +FR+ +  V+ TTQIHTHMCYS FNDII  I  MDADVI+ E SR D  +L    +   +    GPGVYDIHSPRIPS +EI DRI ++L  ++   +W+NPDCGLKTR   E  P+L N+VAAAK +R +L
Sbjct:  572 SWPREDITHEEQTKQLALAIRDEVLDLEAAGIKVIQIDEAALREKLPLRKSDWHVKYLDWAVPAFRLVHSAVKPTTQIHTHMCYSEFNDIIRDIDAMDADVISFEASRGDLVVLDAIHDA-HFETEAGPGVYDIHSPRIPSEKEIEDRIYEILDKMDVKKVWINPDCGLKTRGNAETWPSLENLVAAAKAVRAKL 765
The following BLAST results are available for this feature:
BLAST of CF832573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
METE_MYCTU2.333e-5556.025-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCTA2.333e-5556.025-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBP2.333e-5556.025-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MYCBO2.333e-5556.025-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGG3.047e-5556.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BACP23.047e-5557.445-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAES5.197e-5558.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STAEQ5.197e-5558.675-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLO5.197e-5558.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BIFLD5.197e-5558.465-methyltetrahydropteroyltriglutamate--homocystein... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_02B06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832573 ID=CF832573; Name=CF832573; organism=Citrus sinensis; type=EST; length=788bp
TTTTTTTTTTTTTTTAGAAAATAGAAGCCAATTGCTCAATAGTGCATAAT
ATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTATTCGAATAG
GTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAAAAAAAAAA
TCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTCACTTGGCA
CTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATGTTTGAGAG
GGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACAGTCAGGGT
TAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGTTGATTCTG
TCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATGTCATACAC
ACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCACGGAAGACAGACA
GGAGCTTCTCATCAGAACGAGAGTTCTCAATGGTGATCACATCAGCATCC
ATGTCGATAATTGAGTGGATAATGTCGTTGAAGTTGGAGTAGCACATGTG
GGTGTGGATCTGGGTAGTGTCCTGGACGCCACAGTTGGTGATTCTGAAGG
AGTGGACTGCCCAGTCCAAGTAGAAAGCATGCTCAGATTTCCTAAGAGGC
AATCCTTCCCTCAAGGCAGCCTCATCAATTTGAATAACGTTAATGCCTGC
CTTCTCAAGATCCTCGACTTCGTCCTTGATGGCCAAAGCAATCTGGTAGC
AGGTTTCATGTCTGGGCTGGTCATTTCTAACAAAGGAC
back to top