CF832573

Overview
NameCF832573
Unique NameCF832573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:241..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_RUTMC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=metE PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 8.844e-63
Identity = 121/191 (63.35%), Postives = 144/191 (75.39%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQPR  TC Q++LAI+DEV DLEK+ IN+IQIDEAALREGLPLRKS+   YLDWA+ ++R++  GV D TQIHTHMCYS FNDII +I  MDADVITIE SRSD +LL +F E   Y   IGPGVYDIHSP IPS + I + + K    +    LWVNPDCGLKTR + EV  AL+NMV A++ LR
Sbjct:  567 SFVRDDQPRATTCLQLSLAIRDEVLDLEKSNINIIQIDEAALREGLPLRKSQWQTYLDWAIRAYRVSANGVSDETQIHTHMCYSEFNDIIEAIAQMDADVITIETSRSDMELLDIFDE-FDYPNEIGPGVYDIHSPNIPSVDSIVELMQKAAKYIPIKRLWVNPDCGLKTRHWDEVNLALTNMVLASQQLR 756          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_DICDI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Dictyostelium discoideum GN=metE PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.508e-62
Identity = 120/191 (62.83%), Postives = 144/191 (75.39%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQPR ETC+QI LAI+DEV DLE  GI  IQIDE A+REGLPLR S+   YL WA+ SF +++ GV+D+TQIH+HMCYS+FNDI  SI  MD DV+TIENS+SD KLL  F E   Y   IGPG+YDIHSPRIPS E++ DR+ +ML  L TN+LW+NPDCGLKTR+    + AL NMV  AK  R
Sbjct:  629 SFVRDDQPRSETCFQIGLAIRDEVTDLENKGIACIQIDEPAIREGLPLRLSDWNQYLKWAIDSFLLSSTGVKDSTQIHSHMCYSDFNDIFESIQRMDTDVLTIENSKSDLKLLKAF-EKYGYTNEIGPGLYDIHSPRIPSVEDMKDRVEQMLKYLSTNLLWINPDCGLKTREPETTRLALINMVKVAKQFR 818          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_ALHEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=metE PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.573e-62
Identity = 123/198 (62.12%), Postives = 145/198 (73.23%), Query Frame = -2
Query:  194 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASAK 787
            SFVR+DQPR ETC QIALA++DEV DLE AGI  IQIDE ALREGLPL++ +   YLDWAV  FR+T    QD TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL VF EG +Y   IGPGVYDIHSP  PS + +   + K    +    LWVNPDCGLKTR + EV+PAL NMVAAA++LR +   A+
Sbjct:  568 SFVRDDQPRSETCRQIALALRDEVADLEAAGIPAIQIDEPALREGLPLQQRQWPGYLDWAVDCFRLTASVAQDATQIHTHMCYSEFNDIMGAIATLDADVITIETSRSDMELLEVF-EGFEYPNEIGPGVYDIHSPNTPSVDWMVRLMEKAARRIPVERLWVNPDCGLKTRAWAEVEPALQNMVAAAEILRERYGQAQ 764          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BRAJA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bradyrhizobium japonicum GN=metE PE=3 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 4.389e-62
Identity = 123/191 (64.40%), Postives = 145/191 (75.92%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+D PR E C Q+ALA++DEV DLE AG  +IQIDEAALREGLPLR+S+   YLDWA   FRI + GV D TQIHTHMCYS FNDII +I  MDADVI+IE SRS  +LL  FR   +Y   IGPGVYDIHSPR+P T+E+ + I      L+ + LWVNPDCGLKTRK+ EV+PAL+NMVAAA+ LR
Sbjct:  584 SFVRDDIPRSEVCRQLALAMRDEVRDLENAGAAMIQIDEAALREGLPLRRSDWKAYLDWAGDCFRICSSGVTDQTQIHTHMCYSEFNDIIGAIAAMDADVISIETSRSKMELLDAFRR-YEYPNQIGPGVYDIHSPRVPETDEMKELIVLARTRLQDSQLWVNPDCGLKTRKWEEVRPALANMVAAARELR 773          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_NITWN (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=metE PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.732e-62
Identity = 121/191 (63.35%), Postives = 141/191 (73.82%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+D PR   C QIALAI+DEV DLE+AG  +IQIDEAALREGLPLR+SE   YLDWAV  FR+   GV D TQIHTHMCYS FNDII +I  MDADVI+IE SRS  +LL  F+   KY   IGPGVYDIHSPR+P+ +E+   +      L    +W+NPDCGLKTRK+ EV+PAL NMV AAKL+R
Sbjct:  582 SFVRDDVPRSLACRQIALAIRDEVSDLEQAGATMIQIDEAALREGLPLRRSEWKTYLDWAVECFRLCASGVADATQIHTHMCYSEFNDIIDAIASMDADVISIETSRSKMELLDAFKT-YKYPNEIGPGVYDIHSPRVPAVDEMTGLLKLARERLSDRQIWINPDCGLKTRKWEEVRPALVNMVEAAKLMR 771          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_XYLFA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa GN=metE PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 7.487e-62
Identity = 121/193 (62.69%), Postives = 145/193 (75.13%), Query Frame = -2
Query:  209 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 787
            SFVR+DQ R +TC QIALA++DEV+DLEKAGI VIQIDE A+REGLPLR+ E A YL+WAV SFRI +  V+DTTQIHTHMCYS FNDII ++  +DADVI+IE SRS  +LL  F +  +Y   IGPGVYDIHSPR+P  EE+   + K  AVL    LWVNPDCGLKTR + E + AL  MV AA+ LR +
Sbjct:  567 SFVRDDQERAQTCRQIALALRDEVQDLEKAGIKVIQIDEPAIREGLPLRRGEWADYLNWAVESFRIASSNVRDTTQIHTHMCYSEFNDIIEAVAALDADVISIETSRSRMELLDAFVK-FRYPNAIGPGVYDIHSPRVPQEEEMVLLLKKARAVLPPEQLWVNPDCGLKTRGWKETRAALQTMVHAAQRLRAE 758          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_XYLFT (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=metE PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.778e-62
Identity = 121/193 (62.69%), Postives = 144/193 (74.61%), Query Frame = -2
Query:  209 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 787
            SFVR+DQ R +TC QIALA++DEV+DLEKAGI VIQIDE A+REGLPLR+ E A YL+WAV SFRI +  V DTTQIHTHMCYS FNDII ++  +DADVI+IE SRS  +LL  F +  +Y   IGPGVYDIHSPR+P  EE+   + K  AVL    LWVNPDCGLKTR + E + AL  MV AA+ LR +
Sbjct:  567 SFVRDDQERAQTCRQIALALRDEVQDLEKAGIKVIQIDEPAIREGLPLRRGEWADYLNWAVESFRIASSNVHDTTQIHTHMCYSEFNDIIEAVAALDADVISIETSRSRMELLDAFVK-FRYPNAIGPGVYDIHSPRVPQEEEMVLLLKKARAVLPPEQLWVNPDCGLKTRGWKETRAALQTMVHAAQRLRAE 758          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_XYLFM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M12) GN=metE PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.778e-62
Identity = 121/193 (62.69%), Postives = 144/193 (74.61%), Query Frame = -2
Query:  209 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 787
            SFVR+DQ R +TC QIALA++DEV+DLEKAGI VIQIDE A+REGLPLR+ E A YL+WAV SFRI +  V DTTQIHTHMCYS FNDII ++  +DADVI+IE SRS  +LL  F +  +Y   IGPGVYDIHSPR+P  EE+   + K  AVL    LWVNPDCGLKTR + E + AL  MV AA+ LR +
Sbjct:  567 SFVRDDQERAQTCRQIALALRDEVQDLEKAGIKVIQIDEPAIREGLPLRRGEWADYLNWAVESFRIASSNVHDTTQIHTHMCYSEFNDIIEAVAALDADVISIETSRSRMELLDAFVK-FRYPNAIGPGVYDIHSPRVPQEEEMVLLLKKARAVLPPEQLWVNPDCGLKTRGWKETRAALQTMVHAAQRLRAE 758          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_XYLF2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Xylella fastidiosa (strain M23) GN=metE PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.778e-62
Identity = 121/193 (62.69%), Postives = 144/193 (74.61%), Query Frame = -2
Query:  209 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 787
            SFVR+DQ R +TC QIALA++DEV+DLEKAGI VIQIDE A+REGLPLR+ E A YL+WAV SFRI +  V DTTQIHTHMCYS FNDII ++  +DADVI+IE SRS  +LL  F +  +Y   IGPGVYDIHSPR+P  EE+   + K  AVL    LWVNPDCGLKTR + E + AL  MV AA+ LR +
Sbjct:  567 SFVRDDQERAQTCRQIALALRDEVQDLEKAGIKVIQIDEPAIREGLPLRRGEWADYLNWAVESFRIASSNVHDTTQIHTHMCYSEFNDIIEAVAALDADVISIETSRSRMELLDAFVK-FRYPNAIGPGVYDIHSPRVPQEEEMVLLLKKARAVLPPEQLWVNPDCGLKTRGWKETRAALQTMVHAAQRLRAE 758          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_SALRD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=metE PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 9.778e-62
Identity = 120/191 (62.83%), Postives = 143/191 (74.87%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQ R ETC QIALAI+DEV DLE  GI  IQIDE A REGLPLR+ +   YLDWAV  FR+ + GV+D TQIHTHMCYS FNDII +I DMDADVI++E SRS  +LL  F +   Y   IGPGVYDIHSPR+PS EE+ + I   L  LE + +WVNPDCGLKTR++ EV+P+L NMV AA+ +R
Sbjct:  575 SFVRDDQSRAETCRQIALAIRDEVLDLEDVGIQAIQIDEPAFREGLPLREHQWDDYLDWAVECFRLASSGVRDETQIHTHMCYSEFNDIIEAIADMDADVISVEASRSKMELLDSF-DAFDYPNEIGPGVYDIHSPRVPSVEEMEELIRTALDALEPSQMWVNPDCGLKTRRWVEVQPSLENMVQAAENVR 764          
The following BLAST results are available for this feature:
BLAST of CF832573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
METE_RUTMC8.844e-6363.355-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DICDI1.508e-6262.835-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ALHEH2.573e-6262.125-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BRAJA4.389e-6264.405-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITWN5.732e-6263.355-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFA7.487e-6262.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFT9.778e-6262.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLFM9.778e-6262.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_XYLF29.778e-6262.695-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALRD9.778e-6262.835-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832573 ID=CF832573; Name=CF832573; organism=Citrus sinensis; type=EST; length=788bp
TTTTTTTTTTTTTTTAGAAAATAGAAGCCAATTGCTCAATAGTGCATAAT
ATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTATTCGAATAG
GTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAAAAAAAAAA
TCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTCACTTGGCA
CTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATGTTTGAGAG
GGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACAGTCAGGGT
TAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGTTGATTCTG
TCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATGTCATACAC
ACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCACGGAAGACAGACA
GGAGCTTCTCATCAGAACGAGAGTTCTCAATGGTGATCACATCAGCATCC
ATGTCGATAATTGAGTGGATAATGTCGTTGAAGTTGGAGTAGCACATGTG
GGTGTGGATCTGGGTAGTGTCCTGGACGCCACAGTTGGTGATTCTGAAGG
AGTGGACTGCCCAGTCCAAGTAGAAAGCATGCTCAGATTTCCTAAGAGGC
AATCCTTCCCTCAAGGCAGCCTCATCAATTTGAATAACGTTAATGCCTGC
CTTCTCAAGATCCTCGACTTCGTCCTTGATGGCCAAAGCAATCTGGTAGC
AGGTTTCATGTCTGGGCTGGTCATTTCTAACAAAGGAC
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