CF832573

Overview
NameCF832573
Unique NameCF832573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:241..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_STRGC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metE PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 104/195 (53.33%), Postives = 133/195 (68.21%), Query Frame = -2
Query:  206 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 787
            SF R D    ++  QIALAIKDEV DLE AG+ +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I +MDADVI+ E SRS+ ++L   +    +   +GPGVYDIHSPR+P+  EI   I  +LA + +  +W+NPDCGLKTR   E K +L  +V AAK  R  L
Sbjct:  556 SFPREDISIKDSTLQIALAIKDEVLDLEAAGVKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNMDADVISFEASRSNLEILDELK-AKNFQTEVGPGVYDIHSPRVPNEGEIDHTIEAILAKVPSKKVWINPDCGLKTRGIPETKASLVRLVEAAKAARQHL 749          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_LACLM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=metE PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.565e-49
Identity = 102/192 (53.12%), Postives = 136/192 (70.83%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SF R D    E+  Q+ALA+++EV DLEK+G+ +IQIDEAALRE LPLR+S+ ++ YLDWA+ +FR+ +  V+  TQIHTHMCYS F DII SI  MDADVI+ E SRS   ++   +    +   +GPGVYDIHSPRIPS++EI  ++ K+L  L    +WVNPDCGLKTR   E  P+L+++V A K +R
Sbjct:  559 SFPREDISLKESTLQLALAVQEEVLDLEKSGVKIIQIDEAALREKLPLRRSDWYSEYLDWAIPAFRLVHSKVKAETQIHTHMCYSEFEDIIPSIDAMDADVISFEASRSQLSIIDALKAH-HFQTLVGPGVYDIHSPRIPSSQEIKIQLEKILNKLPIEQVWVNPDCGLKTRGNKETIPSLTHLVEATKEVR 749          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_THESQ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga sp. (strain RQ2) GN=metE PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.493e-49
Identity = 95/196 (48.47%), Postives = 133/196 (67.86%), Query Frame = -2
Query:  200 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 787
            S+ R D P  E  YQIALAI +EV+DLE+AGI ++QIDE A RE  P++KS+   Y +WA+++F +     +  TQIH HMCYS+FN+II  I  ++ DVI+IE SRS  +++S F     +   IG GV+DIHSP +PS  E+ + + ++L VL   ++W+NPDCGLKTR + EV P+L NMVA AK +R +  S
Sbjct:  540 SYYREDIPEREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEIISAFENFKGWIKQIGVGVWDIHSPAVPSINEMREIVERVLRVLPKELIWINPDCGLKTRNWDEVIPSLRNMVALAKEMREKFES 734          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_THEMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga maritima GN=metE PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.493e-49
Identity = 95/196 (48.47%), Postives = 133/196 (67.86%), Query Frame = -2
Query:  200 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 787
            S+ R D P  E  YQIALAI +EV+DLE+AGI ++QIDE A RE  P++KS+   Y +WA+++F +     +  TQIH HMCYS+FN+II  I  ++ DVI+IE SRS  +++S F     +   IG GV+DIHSP +PS  E+ + + ++L VL   ++W+NPDCGLKTR + EV P+L NMVA AK +R +  S
Sbjct:  540 SYYREDIPEREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPIKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEIISAFENFKGWIKQIGVGVWDIHSPAVPSINEMREIVERVLRVLPKELIWINPDCGLKTRNWDEVIPSLRNMVALAKEMREKFES 734          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_STRTD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=metE PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 9.493e-49
Identity = 103/195 (52.82%), Postives = 134/195 (68.72%), Query Frame = -2
Query:  206 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSE-HAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 787
            SF R D    ++  QIALAIKDEV DLE AGI +IQIDEAALRE LPLR+S+ +  YLDWA+ +FR+ +  V   TQIHTHMCYS F DII +I ++DADVI+ E SRS+ ++L   +    +   +GPGVYDIHSPR+P   EI   I  +LA + ++ +W+NPDCGLKTR   E K +L+ ++ AAK  R  L
Sbjct:  556 SFPREDISIKDSTLQIALAIKDEVLDLEAAGIKIIQIDEAALREKLPLRRSDWYEDYLDWAIPAFRLVHSTVAPDTQIHTHMCYSEFTDIIPAIDNLDADVISFEASRSNLEILDELK-AQNFQTEVGPGVYDIHSPRVPQDGEIDHTIEAILAKVPSSKVWINPDCGLKTRGIKETKESLTKLLEAAKAARKNL 749          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_THEP1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=metE PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.619e-48
Identity = 95/193 (49.22%), Postives = 131/193 (67.88%), Query Frame = -2
Query:  209 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 787
            S+ R D P  E  YQIALAI +EV+DLE+AGI ++QIDE A RE  P++KS+   Y +WA+++F +     +  TQIH HMCYS+FN+II  I  ++ DVI+IE SRS  +++S F     +   IG GV+DIHSP +PS +E+   I ++L +L   ++WVNPDCGLKTR + EV P+L NMV  AK LR +
Sbjct:  540 SYYREDIPEREIAYQIALAINEEVKDLEEAGIKIVQIDEPAFREKAPVKKSKWPEYFEWAINAFNLA-ANARPETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEIISAFENFKGWIKQIGVGVWDIHSPAVPSVDEMKSIIERVLRILPKELIWVNPDCGLKTRNWEEVVPSLKNMVDLAKKLRKE 731          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_CANAL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Candida albicans GN=MET6 PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 2.858e-45
Identity = 97/194 (50.00%), Postives = 131/194 (67.53%), Query Frame = -2
Query:  209 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKS-EHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 787
            SF R+D        Q+ LA++DEV DLE AGI VIQ+DE A+REGLPLR   E + YL+WA  SFR+   GV+++TQIH+H CYS+ +   + I  +DADV++IE S+ D+   +  +E  +Y   IG G++DIHSPRIPS +E   RI ++L V   +  WVNPDCGLKTR + EVK +L+NMV AAK  R +
Sbjct:  577 SFPRDDVSGKIQALQLGLALRDEVNDLEGAGITVIQVDEPAIREGLPLRAGKERSDYLNWAAQSFRVATSGVENSTQIHSHFCYSDLDP--NHIKALDADVVSIEFSKKDDP--NYIQEFSEYPNHIGLGLFDIHSPRIPSKQEFVSRIEEILKVYPASKFWVNPDCGLKTRGWPEVKESLTNMVEAAKEFRAK 766          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_CHLRE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.160e-44
Identity = 102/213 (47.89%), Postives = 128/213 (60.09%), Query Frame = -2
Query:  167 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKML--AVLETNI--LWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRT--QLASAK*VVLEIGGI 787
            SF R D  R     Q+ LA++ EV  LE AG  +IQ+D+ ALREGLPL     A YL WAV +FR+        TQ+ TH+CYS+F DI+ +I  MDADV+TIENSRSD+ +++       YG  IGPGVYD+HSP +PS E I  RI   +   +L      +WVNPDCGLKTR + E   AL+NMV AA   R   QLA    V    GG+
Sbjct:  576 SFPRKDISRAAQAMQLGLALRQEVAALEAAGCTIIQVDDPALREGLPLNGERWASYLSWAVDAFRLCTGVAAAGTQVVTHLCYSDFQDILPAIDRMDADVLTIENSRSDKPMMAAL-AAAGYGRDIGPGVYDVHSPVVPSVEFIKSRIRSFVDSGILSGRYDRIWVNPDCGLKTRGWPETIAALANMVEAAAQARAELQLAGGAAVAPVTGGV 787          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_YEAST (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Saccharomyces cerevisiae GN=MET6 PE=1 SV=4)

HSP 1 Score: 172.555 bits (436), Expect = 2.265e-42
Identity = 93/194 (47.94%), Postives = 126/194 (64.95%), Query Frame = -2
Query:  209 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRK-SEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 787
            SF R+D  +     Q+ALA++DEV DLE AGI VIQ+DE ALREGLPLR+ +E + Y  WA  +FR+   GV + TQIH+H CYS+ +   + I  +DADV++IE S+ D+   +   E   Y   IG G++DIHSPRIPS +E   +I+ +L        WVNPDCGLKTR + E + +L++MV AAK  R Q
Sbjct:  575 SFPRDDVDQKTQAMQLALALRDEVNDLEAAGIKVIQVDEPALREGLPLREGTERSAYYTWAAEAFRVATSGVANKTQIHSHFCYSDLDP--NHIKALDADVVSIEFSKKDDA--NYIAEFKNYPNHIGLGLFDIHSPRIPSKDEFIAKISTILKSYPAEKFWVNPDCGLKTRGWEETRLSLTHMVEAAKYFREQ 764          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_SULAC (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus acidocaldarius GN=metE PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.931e-17
Identity = 54/186 (29.03%), Postives = 95/186 (51.08%), Query Frame = -2
Query:  206 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 763
            + +  + +A  I  E+++L   GI VIQ+DE A+      RK +    ++WA+ S   +  GV    ++  H+CY  ++ +   +  +  D I +     +   + +F+   K+   IG GV D+H+ +I S EE+A+ + K+L   +  ++WVNPDCGLK          L NMV    ++R +L
Sbjct:  151 QRDMAFDLAKVINQEIKNLVDIGIKVIQVDEPAIHT----RKED----VEWAIDSINESIKGVN--VKVVLHVCYGEYSYLEPHLDKLKVDQINLALKNYNYTPVKLFK---KWDREIGVGVIDVHNRKIESVEEVAEDLRKLLEYFKPEMVWVNPDCGLKLLPRKIALQKLINMVKGTLIVREEL 323          
The following BLAST results are available for this feature:
BLAST of CF832573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
METE_STRGC5.565e-4953.335-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_LACLM5.565e-4953.135-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THESQ9.493e-4948.475-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEMA9.493e-4948.475-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRTD9.493e-4952.825-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_THEP11.619e-4849.225-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CANAL2.858e-4550.005-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHLRE3.160e-4447.895-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_YEAST2.265e-4247.945-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SULAC1.931e-1729.03Probable methylcobalamin:homocysteine methyltransf... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832573 ID=CF832573; Name=CF832573; organism=Citrus sinensis; type=EST; length=788bp
TTTTTTTTTTTTTTTAGAAAATAGAAGCCAATTGCTCAATAGTGCATAAT
ATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTATTCGAATAG
GTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAAAAAAAAAA
TCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTCACTTGGCA
CTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATGTTTGAGAG
GGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACAGTCAGGGT
TAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGTTGATTCTG
TCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATGTCATACAC
ACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCACGGAAGACAGACA
GGAGCTTCTCATCAGAACGAGAGTTCTCAATGGTGATCACATCAGCATCC
ATGTCGATAATTGAGTGGATAATGTCGTTGAAGTTGGAGTAGCACATGTG
GGTGTGGATCTGGGTAGTGTCCTGGACGCCACAGTTGGTGATTCTGAAGG
AGTGGACTGCCCAGTCCAAGTAGAAAGCATGCTCAGATTTCCTAAGAGGC
AATCCTTCCCTCAAGGCAGCCTCATCAATTTGAATAACGTTAATGCCTGC
CTTCTCAAGATCCTCGACTTCGTCCTTGATGGCCAAAGCAATCTGGTAGC
AGGTTTCATGTCTGGGCTGGTCATTTCTAACAAAGGAC
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