CF832573

Overview
NameCF832573
Unique NameCF832573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:241..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_SULTO (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus tokodaii GN=metE PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.617e-17
Identity = 50/186 (26.88%), Postives = 95/186 (51.08%), Query Frame = -2
Query:  206 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 763
            + +  + +A  I  E++ L +AG  +IQ+DE A+          H   ++WA+ +   +  G+    ++  H+CY  ++ +   +  ++ D I +     + + + +F+   K+   IG GV D+H+ RI + EE+A+ +  +L   +  ++WVNPDCGLK          L NMV   K++R +L
Sbjct:  150 KKDLAFDLAKVINSEMKKLVEAGAKIIQVDEPAIHT--------HKNEVEWAIEAVNESIKGIN--VKVVMHVCYGEYSYLEPYLDKLNVDQINLALKNYNYEPVKLFK---KWDREIGVGVIDVHNKRIETPEEVANDLKMLLDYFKPEMIWVNPDCGLKLLPRKIAFQKLLNMVKGTKIVREEL 322          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_SULIY (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=metE PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.134e-16
Identity = 56/188 (29.79%), Postives = 95/188 (50.53%), Query Frame = -2
Query:  206 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAG--IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 763
            + +  + +A AI  E+++L +AG  +IQIDE AL      R+ +    + W V +      GV    ++  H+CY  ++ +   + ++  D I       + K L + +   +YG    +G GV D+H+ RI ++EE+A+ I K+L       LW+NPDCGLK          L +MV   K++R +L
Sbjct:  150 KKDLVFDLAKAINQEIKNLVEAGAKIIQIDEPALHT----RRED----VSWGVEAVNEAVKGVN--AKLVMHICYGEYSFVAPYLNELKVDQINFAFKIYNYKPLELLK---RYGFDKELGAGVIDVHNRRIETSEEVANDIRKILEYFTPEKLWINPDCGLKLLSRKIAYQKLVSMVEGTKVVREEL 324          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_SULSO (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus solfataricus GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 55/188 (29.26%), Postives = 95/188 (50.53%), Query Frame = -2
Query:  206 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAG--IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 763
            + +  + +A AI  E+++L +AG  +IQIDE AL      RK +    + W V +      GV    ++  H+CY +++ +     ++  D I       + K L + +   KYG    +G GV D+H+ ++ ++EE+A+ I K+L       +W+NPDCGLK          L +MV   K++R +L
Sbjct:  150 KKDLVFDLAKAINQEIKNLVEAGAKIIQIDEPALHT----RKED----VSWGVEAVNEAVKGVN--AKLVMHICYGDYSFVAPYFNEIKVDQINFALKIYNYKPLELLK---KYGFDKELGAGVVDVHNRKVETSEEVANDIRKILEYFPPEKVWINPDCGLKLLSRKIAYQKLVSMVEGTKVVREEL 324          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_SULIN (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 55/188 (29.26%), Postives = 95/188 (50.53%), Query Frame = -2
Query:  206 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAG--IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 763
            + +  + +A AI  E+++L +AG  +IQIDE AL      R+ +    + W V +      GV    ++  H+CY  ++ +   + ++  D I       + K L + +   +YG    +G GV D+H+ RI ++EE+A+ I K+L       +W+NPDCGLK          L +MV   K++R +L
Sbjct:  150 KKDLVFDLAKAINQEIKNLVEAGAKIIQIDEPALHT----RRED----VSWGVEAVNEAVKGVN--AKLVMHICYGEYSFVAPYLNELKVDQINFAFKIYNYKPLELLK---RYGFDKELGAGVIDVHNRRIETSEEVANDIRKILEYFTPEKVWINPDCGLKLLSRKIAYQKLVSMVEGTKVVREEL 324          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_SULIM (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 55/188 (29.26%), Postives = 95/188 (50.53%), Query Frame = -2
Query:  206 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAG--IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 763
            + +  + +A AI  E+++L +AG  +IQIDE AL      R+ +    + W V +      GV    ++  H+CY  ++ +   + ++  D I       + K L + +   +YG    +G GV D+H+ RI ++EE+A+ I K+L       +W+NPDCGLK          L +MV   K++R +L
Sbjct:  150 KKDLVFDLAKAINQEIKNLVEAGAKIIQIDEPALHT----RRED----VSWGVEAVNEAVKGVN--AKLVMHICYGEYSFVAPYLNELKVDQINFAFKIYNYKPLELLK---RYGFDKELGAGVIDVHNRRIETSEEVANDIRKILEYFTPEKVWINPDCGLKLLSRKIAYQKLVSMVEGTKVVREEL 324          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_SULIL (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 55/188 (29.26%), Postives = 95/188 (50.53%), Query Frame = -2
Query:  206 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAG--IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 763
            + +  + +A AI  E+++L +AG  +IQIDE AL      R+ +    + W V +      GV    ++  H+CY  ++ +   + ++  D I       + K L + +   +YG    +G GV D+H+ RI ++EE+A+ I K+L       +W+NPDCGLK          L +MV   K++R +L
Sbjct:  150 KKDLVFDLAKAINQEIKNLVEAGAKIIQIDEPALHT----RRED----VSWGVEAVNEAVKGVN--AKLVMHICYGEYSFVAPYLNELKVDQINFAFKIYNYKPLELLK---RYGFDKELGAGVIDVHNRRIETSEEVANDIRKILEYFTPEKVWINPDCGLKLLSRKIAYQKLVSMVEGTKVVREEL 324          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_SULIK (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 55/188 (29.26%), Postives = 95/188 (50.53%), Query Frame = -2
Query:  206 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAG--IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 763
            + +  + +A AI  E+++L +AG  +IQIDE AL      R+ +    + W V +      GV    ++  H+CY  ++ +   + ++  D I       + K L + +   +YG    +G GV D+H+ RI ++EE+A+ I K+L       +W+NPDCGLK          L +MV   K++R +L
Sbjct:  150 KKDLVFDLAKAINQEIKNLVEAGAKIIQIDEPALHT----RRED----VSWGVEAVNEAVKGVN--AKLVMHICYGEYSFVAPYLNELKVDQINFAFKIYNYKPLELLK---RYGFDKELGAGVIDVHNRRIETSEEVANDIRKILEYFTPEKVWINPDCGLKLLSRKIAYQKLVSMVEGTKVVREEL 324          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_SULIA (Probable methylcobalamin:homocysteine methyltransferase OS=Sulfolobus islandicus (strain M.16.27) GN=metE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.755e-16
Identity = 55/188 (29.26%), Postives = 95/188 (50.53%), Query Frame = -2
Query:  206 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAG--IGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 763
            + +  + +A AI  E+++L +AG  +IQIDE AL      R+ +    + W V +      GV    ++  H+CY  ++ +   + ++  D I       + K L + +   +YG    +G GV D+H+ RI ++EE+A+ I K+L       +W+NPDCGLK          L +MV   K++R +L
Sbjct:  150 KKDLVFDLAKAINQEIKNLVEAGAKIIQIDEPALHT----RRED----VSWGVEAVNEAVKGVN--AKLVMHICYGEYSFVAPYLNELKVDQINFAFKIYNYKPLELLK---RYGFDKELGAGVIDVHNRRIETSEEVANDIRKILEYFTPEKVWINPDCGLKLLSRKIAYQKLVSMVEGTKVVREEL 324          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PYRKO (Probable methylcobalamin:homocysteine methyltransferase OS=Pyrococcus kodakaraensis GN=metE PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.082e-15
Identity = 57/195 (29.23%), Postives = 90/195 (46.15%), Query Frame = -2
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            SF      + E  + +A  +  E + LEK G   IQIDE A+          H   +  AV +      GV+   +   H+CYSN+  +     D+      +E +  + + L   ++      G G  V D+H+PR+ S EE+A  I K++  +E   L++NPDCGLK          L NMV   +++R +LA
Sbjct:  141 SFNEYYSSKEELAFDLAKILNKEFKLLEKEGATFIQIDEPAMLN--------HPDEVSIAVEAINRAVKGVK--VKFGLHVCYSNYYLLADYFDDIKVSQFALEAANRNFRDLDYLKKLTHQELGFG--VVDVHNPRVESPEEVAKAIRKVMEYIEPERLYINPDCGLKLLDRRIAYQKLVNMVKGVEIVRRELA 323          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_AERPE (Probable methylcobalamin:homocysteine methyltransferase OS=Aeropyrum pernix GN=metE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.295e-13
Identity = 59/187 (31.55%), Postives = 93/187 (49.73%), Query Frame = -2
Query:  209 RHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLA--VLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQ 763
            R E  + +A AI+ E+++    G   IQ+DE AL    P +  E A  L  A+    I   GV     +H  +CY     I+  I+D   D   +E   S+ +LL   +E   Y   IG GV D+HS ++ S  E+ + I++++   ++    ++V+PDCGLK       +  L NMV AA+L R +
Sbjct:  154 RRELIFDLARAIRREIDEALARGAEYIQVDEPALSTR-PFK--EEAELLKEALD---IIFKGVGAKRIVH--ICYGELERILPYILDYPVDQFDLEMKNSNFRLLPYLKE-YGYDKEIGYGVIDVHSFQVESVGEVKEAIDRLMKMDIVGPEKVYVDPDCGLKRLPRDVARAKLKNMVEAARLAREE 331          
The following BLAST results are available for this feature:
BLAST of CF832573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
METE_SULTO5.617e-1726.88Probable methylcobalamin:homocysteine methyltransf... [more]
METE_SULIY2.134e-1629.79Probable methylcobalamin:homocysteine methyltransf... [more]
METE_SULSO4.755e-1629.26Probable methylcobalamin:homocysteine methyltransf... [more]
METE_SULIN4.755e-1629.26Probable methylcobalamin:homocysteine methyltransf... [more]
METE_SULIM4.755e-1629.26Probable methylcobalamin:homocysteine methyltransf... [more]
METE_SULIL4.755e-1629.26Probable methylcobalamin:homocysteine methyltransf... [more]
METE_SULIK4.755e-1629.26Probable methylcobalamin:homocysteine methyltransf... [more]
METE_SULIA4.755e-1629.26Probable methylcobalamin:homocysteine methyltransf... [more]
METE_PYRKO3.082e-1529.23Probable methylcobalamin:homocysteine methyltransf... [more]
METE_AERPE1.295e-1331.55Probable methylcobalamin:homocysteine methyltransf... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832573 ID=CF832573; Name=CF832573; organism=Citrus sinensis; type=EST; length=788bp
TTTTTTTTTTTTTTTAGAAAATAGAAGCCAATTGCTCAATAGTGCATAAT
ATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTATTCGAATAG
GTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAAAAAAAAAA
TCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTCACTTGGCA
CTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATGTTTGAGAG
GGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACAGTCAGGGT
TAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGTTGATTCTG
TCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATGTCATACAC
ACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCACGGAAGACAGACA
GGAGCTTCTCATCAGAACGAGAGTTCTCAATGGTGATCACATCAGCATCC
ATGTCGATAATTGAGTGGATAATGTCGTTGAAGTTGGAGTAGCACATGTG
GGTGTGGATCTGGGTAGTGTCCTGGACGCCACAGTTGGTGATTCTGAAGG
AGTGGACTGCCCAGTCCAAGTAGAAAGCATGCTCAGATTTCCTAAGAGGC
AATCCTTCCCTCAAGGCAGCCTCATCAATTTGAATAACGTTAATGCCTGC
CTTCTCAAGATCCTCGACTTCGTCCTTGATGGCCAAAGCAATCTGGTAGC
AGGTTTCATGTCTGGGCTGGTCATTTCTAACAAAGGAC
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