CF832573

Overview
NameCF832573
Unique NameCF832573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:241..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PYRFU (Probable methylcobalamin:homocysteine methyltransferase OS=Pyrococcus furiosus GN=metE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.768e-13
Identity = 51/179 (28.49%), Postives = 86/179 (48.04%), Query Frame = -2
Query:  206 IALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 742
            +A  I  E++ LEK G   +Q+DE A+          H   +  AV +      G++   ++  H+CYSN+N +     ++      +E +  + + +   ++       +G GV D+H+PR+ S EEI   I K+   LE   +++NPDCGLK          L NMV A + +R +L
Sbjct:  156 LAEIINKELKVLEKHGAKFVQLDEPAMLN--------HPSEVPLAVDAINRAVKGIK--MKVGLHVCYSNYNLLADYFDEIKVTQFALEFANRNFRDMDFLKK--LSNKELGFGVVDVHNPRVESVEEIRQAIKKVFTYLEPEWVYINPDCGLKLLDRKIAYQKLVNMVQAVRGVRKEL 322          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PYRAB (Probable methylcobalamin:homocysteine methyltransferase OS=Pyrococcus abyssi GN=metE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.921e-13
Identity = 52/179 (29.05%), Postives = 85/179 (47.49%), Query Frame = -2
Query:  206 IALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 742
            +A  I  E++ LE+ G   IQ+DE A+          H   +  AV +      G++   ++  H+CYSN+  +     D+      +E +    + +   ++    G  +G GV D+H+PRI + +EI   I K    LE   L++NPDCGLK          L NMV A +++R +L
Sbjct:  156 LAKIINKELKTLEEHGATYIQLDEPAMLN--------HPDEVPLAVEAINRAVKGIK--IKVGLHVCYSNYYLLADYFDDIRVTQFALEFANRQFRDMDFLKK--LSGKELGFGVVDVHNPRIETVDEIVRAIKKAFNYLEPEWLYINPDCGLKLLDRRIAYQKLVNMVKAVRIVRKEL 322          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PYRHO (Probable methylcobalamin:homocysteine methyltransferase OS=Pyrococcus horikoshii GN=metE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.870e-12
Identity = 51/179 (28.49%), Postives = 85/179 (47.49%), Query Frame = -2
Query:  206 IALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 742
            +A  I  E++ LE  G   IQ+DE A+          H   +  AV +      G++   ++  H+CYSN+  +     ++      +E +    + +   ++       +G GV D+H+PRI S EEI   I K+   +E  +L++NPDCG+K          L NMV A +L+R +L
Sbjct:  156 LAKIINKELKMLENHGALYIQLDEPAMLN--------HPDEVPLAVEAINKAVKGIK--IKVGLHVCYSNYYLLADYFDEIRVTQFALEFANRQFRDMDFLKK--LSNKELGFGVVDVHNPRIESVEEIVKAIKKVFEYVEPELLYINPDCGMKLLDRNIAYNKLVNMVKATELVRKEL 322          
The following BLAST results are available for this feature:
BLAST of CF832573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
METE_PYRFU3.768e-1328.49Probable methylcobalamin:homocysteine methyltransf... [more]
METE_PYRAB4.921e-1329.05Probable methylcobalamin:homocysteine methyltransf... [more]
METE_PYRHO1.870e-1228.49Probable methylcobalamin:homocysteine methyltransf... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832573 ID=CF832573; Name=CF832573; organism=Citrus sinensis; type=EST; length=788bp
TTTTTTTTTTTTTTTAGAAAATAGAAGCCAATTGCTCAATAGTGCATAAT
ATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTATTCGAATAG
GTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAAAAAAAAAA
TCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTCACTTGGCA
CTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATGTTTGAGAG
GGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACAGTCAGGGT
TAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGTTGATTCTG
TCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATGTCATACAC
ACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCACGGAAGACAGACA
GGAGCTTCTCATCAGAACGAGAGTTCTCAATGGTGATCACATCAGCATCC
ATGTCGATAATTGAGTGGATAATGTCGTTGAAGTTGGAGTAGCACATGTG
GGTGTGGATCTGGGTAGTGTCCTGGACGCCACAGTTGGTGATTCTGAAGG
AGTGGACTGCCCAGTCCAAGTAGAAAGCATGCTCAGATTTCCTAAGAGGC
AATCCTTCCCTCAAGGCAGCCTCATCAATTTGAATAACGTTAATGCCTGC
CTTCTCAAGATCCTCGACTTCGTCCTTGATGGCCAAAGCAATCTGGTAGC
AGGTTTCATGTCTGGGCTGGTCATTTCTAACAAAGGAC
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