CF832573

Overview
NameCF832573
Unique NameCF832573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:241..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_RHILO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Rhizobium loti GN=metE PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.108e-60
Identity = 119/197 (60.41%), Postives = 142/197 (72.08%), Query Frame = -2
Query:  197 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 787
            SFVR+D PR   C Q+ALAI+DEV DLEKAG  +IQIDEAALREGLPLR+++   YLDWAV  FR+ +  V D TQIHTHMCYS F DI+ +I  MDADVI+IE SRS  +LL   R   KY   IGPGVYDIHSPR+P   EI++ I      L    LWVNPDCGLKTR++ EV+PAL NMVAAA+ +R +  +A
Sbjct:  581 SFVRDDLPRSAVCRQVALAIRDEVSDLEKAGAKMIQIDEAALREGLPLREADWQAYLDWAVECFRLASTAVGDATQIHTHMCYSEFGDIVDAIAAMDADVISIETSRSQLELLDTLRT-FKYPNEIGPGVYDIHSPRVPEVGEISNLIMLARKRLSDGQLWVNPDCGLKTRRWEEVRPALVNMVAAARAIRQKAQTA 776          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BURXL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia xenovorans (strain LB400) GN=metE PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.108e-60
Identity = 119/196 (60.71%), Postives = 142/196 (72.45%), Query Frame = -2
Query:  200 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 787
            SFVR+DQPR  T  Q+ALAI+DEV DLEKAGI +IQIDE A REGLPLR+++ A YL+WA  +FRI+  GV D TQIHTHMCYS FNDI+ SI  MDADVITIE SRS  +LL  F     Y   IGPGVYDIHSPR+P  + +   + +   V+    LWVNPDCGLKTR + E + AL+NMV AAK LR +LA+
Sbjct:  562 SFVRDDQPRSTTALQLALAIRDEVVDLEKAGIRIIQIDEPAFREGLPLRRADWAAYLEWATRAFRISAAGVADQTQIHTHMCYSEFNDILPSIAAMDADVITIETSRSAMELLDGF-GAFAYPNEIGPGVYDIHSPRVPGADAMQRLLERACEVIPAERLWVNPDCGLKTRGWPETEAALANMVRAAKALRAKLAA 756          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_CHRSD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=metE PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.365e-60
Identity = 118/191 (61.78%), Postives = 140/191 (73.30%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQPR  TC QIAL+++DEV DLE AGI +IQIDE ALREGLPLR+ E   YLDWAV SF+++    +D TQIHTHMCYS FNDII +I  +DADVITIE SRSD +LL  F++   Y   IGPGVYDIHSP IP  E +   + K    +    LWVNPDCGLKTR + EV+PAL+NMV AA+ LR
Sbjct:  568 SFVRDDQPRDATCRQIALSLRDEVADLEAAGIKIIQIDEPALREGLPLRQGEWQEYLDWAVKSFKLSAAVARDETQIHTHMCYSEFNDIIAAIAALDADVITIETSRSDMELLDAFQD-FAYPNEIGPGVYDIHSPNIPEVEWMVSLMEKAAEKIPAERLWVNPDCGLKTRGWAEVEPALANMVEAARELR 757          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BORA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella avium (strain 197N) GN=metE PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 5.365e-60
Identity = 118/191 (61.78%), Postives = 139/191 (72.77%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQPR  TC Q+ALA++DEV DLEKAG+ VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV D TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + +   + K  A L    LWVNPDCGLKTR + E + AL +MV AA+ LR
Sbjct:  573 SFVRDDQPREATCRQLALALRDEVLDLEKAGVKVIQIDEPAIREGLPLRRADWQAYLDWAVDCFRLSTAGVADDTQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPDVDWMVGLMQKAGANLSKERLWVNPDCGLKTRAWPETEAALISMVQAARTLR 762          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BLOFL (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia floridanus GN=metE PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 9.152e-60
Identity = 112/191 (58.64%), Postives = 142/191 (74.35%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SF R D PRH    Q+ALAI+DEV DLEK+GI VIQIDE ALREGLPL+KSE ++YL WA+++F+IT   V+D TQIHTHMCYS FN+II  I+ +D DVI+IE+SRSD +LL   +   K    IGPG+YDIHS   PS  EI D++ K+L  +  + LW+NPDCGLKTR + E++ +L+NMV AAK LR
Sbjct:  572 SFAREDIPRHMIALQLALAIRDEVMDLEKSGIGVIQIDEPALREGLPLKKSEQSYYLKWAINTFKITVSSVKDNTQIHTHMCYSEFNEIIDDILKLDVDVISIESSRSDLQLLQFIKTAGKKLNEIGPGIYDIHSIHQPSINEIMDKLKKLLQYIPKDRLWINPDCGLKTRSWNEIRESLNNMVIAAKTLR 762          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BURPP (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metE PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.195e-59
Identity = 119/196 (60.71%), Postives = 140/196 (71.43%), Query Frame = -2
Query:  200 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 787
            SFVR+DQPR  T  Q+ALAI+DEV DLEKAGI +IQIDE A REGLPLR+ + A YL+WA   FRI+  GV D TQIHTHMCYS FNDI+ SI  MDADVITIE SRS  +LL  F     Y   IGPGVYDIHSPR+P  + +   + +   V+    LWVNPDCGLKTR + E + AL+NMV AAK LR +LA+
Sbjct:  562 SFVRDDQPRSTTALQLALAIRDEVVDLEKAGIRIIQIDEPAFREGLPLRRGDWAAYLEWATRVFRISAAGVADQTQIHTHMCYSEFNDILPSIAAMDADVITIETSRSAMELLDGF-GAFAYPNEIGPGVYDIHSPRVPDAQAMQRLLERACEVIPAERLWVNPDCGLKTRGWPETEAALTNMVRAAKALRAKLAA 756          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BLOPB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Blochmannia pennsylvanicus (strain BPEN) GN=metE PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.195e-59
Identity = 112/197 (56.85%), Postives = 147/197 (74.62%), Query Frame = -2
Query:  197 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 787
            SF R D  R     Q+AL+I+DEV DLEK+GI +IQIDE ALREGLPL++S+   YL+WA++ FRIT   V+D TQIHTHMCYS F+DII++I+ +DADVI+IE +RSDEK+L   R  +K    IGPG+YDIHSP  P+  ++  RIN++L  +    LW+NPDCGLKTR + E+K +L+NMV+AAKLLR Q  S+
Sbjct:  568 SFPREDMQRKTIALQLALSIRDEVIDLEKSGIGIIQIDEPALREGLPLKRSDQKQYLEWAINVFRITVSSVKDDTQIHTHMCYSEFSDIIYAILALDADVISIEAARSDEKILKSIRHVIKNLNEIGPGIYDIHSPNKPTQNDLIRRINQLLKYIPEQRLWINPDCGLKTRSWPEIKHSLNNMVSAAKLLRKQFYSS 764          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_RALEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha GN=metE PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.561e-59
Identity = 118/196 (60.20%), Postives = 148/196 (75.51%), Query Frame = -2
Query:  200 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 787
            SFVR+DQPR  T  Q+ALAI+DEV DLE+AGI VIQIDE ALREGLPLR+++   YLDWAV +FR++  GVQD TQIHTHMCY+ FNDI+ +I  MDADVITIE SRS  +LL  F +   Y   IGPGVYDIHSPR+PS + +   +++   V+    LWVNPDCGLKTR + E + AL+NMV+AA+ LR +L++
Sbjct:  563 SFVRDDQPRATTARQLALAIRDEVCDLEQAGIRVIQIDEPALREGLPLRRADWDAYLDWAVTAFRLSASGVQDQTQIHTHMCYAEFNDILPAIAAMDADVITIETSRSAMELLEGFGD-FDYPNEIGPGVYDIHSPRVPSVQAMERLLDRACEVVPPQRLWVNPDCGLKTRGWEETEAALANMVSAARALRARLSA 757          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_RALEH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metE PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.561e-59
Identity = 118/196 (60.20%), Postives = 148/196 (75.51%), Query Frame = -2
Query:  200 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLAS 787
            SFVR+DQPR  T  Q+ALAI+DEV DLE+AGI VIQIDE ALREGLPLR+++   YLDWAV +FR++  GVQD TQIHTHMCY+ FNDI+ +I  MDADVITIE SRS  +LL  F +   Y   IGPGVYDIHSPR+PS + +   +++   V+    LWVNPDCGLKTR + E + AL+NMV+AA+ LR +L++
Sbjct:  563 SFVRDDQPRATTARQLALAIRDEVCDLEQAGIRVIQIDEPALREGLPLRRADWDAYLDWAVTAFRLSASGVQDQTQIHTHMCYAEFNDILPAIAAMDADVITIETSRSAMELLEGFGD-FDYPNEIGPGVYDIHSPRVPSVQAMERLLDRACEVVPPQRLWVNPDCGLKTRGWEETEAALANMVSAARALRARLSA 757          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_DESRM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=metE PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.561e-59
Identity = 113/194 (58.25%), Postives = 144/194 (74.23%), Query Frame = -2
Query:  206 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 787
            S+ R+D  R   C QIALAI+DE+ DL+KAGI +IQ+DEAA +EG PLRK + A+Y +WAV SF++        TQIHTHMCYS+FNDIIH+I  MDADVITIE SRS  KLL+VF     Y   IGPG+YDIHSPR+PS EE+ ++I  ++ VL  + LW+NPDCGLKTRK+ E++ +LSNMV AA+ +R  L
Sbjct:  566 SYCRSDMERSAVCEQIALAIRDEINDLQKAGIKIIQVDEAAFKEGYPLRKEKVAYYENWAVKSFKLAVSSAAIETQIHTHMCYSDFNDIIHTIEKMDADVITIETSRSGNKLLTVFATR-GYKNEIGPGIYDIHSPRVPSVEELEEKIRNLMLVLPPSKLWINPDCGLKTRKWDEIRWSLSNMVKAAQHIRLGL 758          
The following BLAST results are available for this feature:
BLAST of CF832573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
METE_RHILO4.108e-6060.415-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURXL4.108e-6060.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRSD5.365e-6061.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORA15.365e-6061.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOFL9.152e-6058.645-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BURPP1.195e-5960.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BLOPB1.195e-5956.855-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEU1.561e-5960.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALEH1.561e-5960.205-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_DESRM1.561e-5958.255-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832573 ID=CF832573; Name=CF832573; organism=Citrus sinensis; type=EST; length=788bp
TTTTTTTTTTTTTTTAGAAAATAGAAGCCAATTGCTCAATAGTGCATAAT
ATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTATTCGAATAG
GTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAAAAAAAAAA
TCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTCACTTGGCA
CTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATGTTTGAGAG
GGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACAGTCAGGGT
TAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGTTGATTCTG
TCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATGTCATACAC
ACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCACGGAAGACAGACA
GGAGCTTCTCATCAGAACGAGAGTTCTCAATGGTGATCACATCAGCATCC
ATGTCGATAATTGAGTGGATAATGTCGTTGAAGTTGGAGTAGCACATGTG
GGTGTGGATCTGGGTAGTGTCCTGGACGCCACAGTTGGTGATTCTGAAGG
AGTGGACTGCCCAGTCCAAGTAGAAAGCATGCTCAGATTTCCTAAGAGGC
AATCCTTCCCTCAAGGCAGCCTCATCAATTTGAATAACGTTAATGCCTGC
CTTCTCAAGATCCTCGACTTCGTCCTTGATGGCCAAAGCAATCTGGTAGC
AGGTTTCATGTCTGGGCTGGTCATTTCTAACAAAGGAC
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