CF832573

Overview
NameCF832573
Unique NameCF832573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:241..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BORPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella pertussis GN=metE PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.561e-59
Identity = 117/191 (61.26%), Postives = 138/191 (72.25%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQPR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + + + + K  A L    LWVNPDCGLKTR + E + AL  MV AA+ LR
Sbjct:  573 SFVRDDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPEVDWMVELMRKAAARLPKERLWVNPDCGLKTRAWPETEAALIGMVQAARTLR 762          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BORPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella parapertussis GN=metE PE=3 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.561e-59
Identity = 117/191 (61.26%), Postives = 138/191 (72.25%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQPR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + + + + K  A L    LWVNPDCGLKTR + E + AL  MV AA+ LR
Sbjct:  573 SFVRDDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPEVDWMVELMRKAAARLPKERLWVNPDCGLKTRAWPETEAALIGMVQAARTLR 762          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BORBR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella bronchiseptica GN=metE PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.561e-59
Identity = 117/191 (61.26%), Postives = 138/191 (72.25%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQPR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + + + + K  A L    LWVNPDCGLKTR + E + AL  MV AA+ LR
Sbjct:  573 SFVRDDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPEVDWMVELMRKAAARLPKERLWVNPDCGLKTRAWPETEAALIGMVQAARTLR 762          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_BORPD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=metE PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.663e-59
Identity = 115/191 (60.21%), Postives = 139/191 (72.77%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SFVR+DQPR +TC Q+ALA++DEV DLE+AG+ VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV   TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E  +Y   IGPGVYDIHSP +P  + +   + K    L +  LWVNPDCGLKTR + E + AL  MV AA+ LR
Sbjct:  573 SFVRDDQPREQTCRQLALALRDEVVDLEQAGVRVIQIDEPAIREGLPLRRADWQAYLDWAVDCFRLSTAGVAADTQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFRYPNDIGPGVYDIHSPNVPDVDWMVGLMRKAAGRLPSERLWVNPDCGLKTRAWPETEAALVGMVEAARALR 762          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_NITEU (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosomonas europaea GN=metE PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.478e-59
Identity = 114/194 (58.76%), Postives = 140/194 (72.16%), Query Frame = -2
Query:  206 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQL 787
            SFVR+DQPR  T  Q+ALAI+DEV DLE AGI +IQIDE A REGLPLRK +   YLDWAV +FR+ + GV+D TQIHTHMCYS F+DI+ +I ++DADVITIE SRS  +LL  F +   Y   IGPGVYDIHSPR+P   E+ + + K    ++  +LWVNPDCGLKTR + E + AL  MV  AK LR+ L
Sbjct:  564 SFVRDDQPRSTTALQLALAIRDEVADLENAGIGMIQIDEPAFREGLPLRKQDWKSYLDWAVKAFRVASSGVKDETQIHTHMCYSEFHDILPAIAELDADVITIETSRSRMELLDAFVK-FSYPNEIGPGVYDIHSPRVPDASEMFELLKKASRYIDPTLLWVNPDCGLKTRNWPETQTALQKMVDCAKTLRSAL 756          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PSEU5 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=metE PE=3 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.542e-59
Identity = 117/191 (61.26%), Postives = 134/191 (70.16%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SF R D PR     Q+ALAI+DEV DLE AGI +IQIDEAA REGLPLR+ +   YLDWAV +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRS  +LL  FR    Y   IGPGVYDIHSPR+P T E+   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR
Sbjct:  574 SFAREDVPREVQARQLALAIRDEVCDLEAAGIRIIQIDEAAFREGLPLRREQWRHYLDWAVEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSQMELLEAFR-AFDYPNDIGPGVYDIHSPRVPDTAEMVQLLEKAAECIPAERLWVNPDCGLKTRGWPETEAALVNMVAAARQLR 763          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_NITOC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metE PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.932e-59
Identity = 115/192 (59.90%), Postives = 139/192 (72.40%), Query Frame = -2
Query:  212 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRT 787
            SFVR+DQPR +TC Q+AL ++DEV DLE+A I +IQ+DE A REGLPLR+ E   YL WAV  FR+ + GV+D TQIHTHMCYS FNDIIH+I  +DADVITIE SRSD +LL+ F    +Y   IGPGVYDIHSP +P+  +I   I K    +    LWVNPDCGLKTR + EV+ AL  MVAAA  LR+
Sbjct:  567 SFVRDDQPRADTCLQLALVLRDEVRDLEQADIKLIQVDEPAFREGLPLRRVEWESYLAWAVRCFRVASSGVEDGTQIHTHMCYSEFNDIIHAIAALDADVITIETSRSDGELLAAF-AAFEYPNEIGPGVYDIHSPVVPTEAQIVGLIKKAAEYIPAERLWVNPDCGLKTRAWPEVETALRTMVAAAHGLRS 757          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_CHRVO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromobacterium violaceum GN=metE PE=3 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 7.747e-59
Identity = 118/197 (59.90%), Postives = 142/197 (72.08%), Query Frame = -2
Query:  197 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 787
            SFVR+D PR E C QIALA+ DEV DLE AGI VIQIDE A+REGLPL+++    YL WA  +FR+++ GV D TQIHTHMCYS F DI+ +I  +DADVITIE SRSD  LL+ F    +Y   IGPGVYDIHSPR+PS  EI   ++K L V+    LWVNPDCGLKTR + EV+ AL+ MVA  + LR +LA A
Sbjct:  564 SFVRDDLPRREVCRQIALALNDEVLDLEAAGIRVIQIDEPAIREGLPLKRAGRDVYLAWAGEAFRLSSRGVDDATQIHTHMCYSEFGDILPAIAALDADVITIETSRSDMALLADFGR-FRYPNAIGPGVYDIHSPRVPSAAEIRALLDKALRVIPAERLWVNPDCGLKTRGWPEVEAALAAMVAVGRELREKLAQA 759          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_RALSO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia solanacearum GN=metE PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.012e-58
Identity = 117/197 (59.39%), Postives = 140/197 (71.07%), Query Frame = -2
Query:  197 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLASA 787
            SFVR+DQPR +T  QIALA++DEV DLE AGI  IQIDE A REGLPLR  + A YL+WA   FR++  GV++ TQIHTHMCYS FNDI+ +I  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSPR+P  EE+   ++K   V+    LWVNPDCGLKTR + EV+ AL  MV A + LR + A A
Sbjct:  563 SFVRDDQPREQTALQIALALRDEVRDLEAAGIAAIQIDEPAFREGLPLRAGDVAVYLEWAARVFRVSASGVRNDTQIHTHMCYSEFNDILPAIASMDADVITIETSRSNMELLDAFGE-FAYPNEIGPGVYDIHSPRVPRVEEMEALLDKAAQVVPVQRLWVNPDCGLKTRGWPEVEAALRGMVEATRRLRARHAGA 758          
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PSESM (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas syringae pv. tomato GN=metE PE=3 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.012e-58
Identity = 118/191 (61.78%), Postives = 136/191 (71.20%), Query Frame = -2
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SF R D  R     Q+ALAI+DEV DLE+AGI ++QIDEAA REGLPLRK++   YLDWAV +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F E   Y   IGPGVYDIHSPR+P T E+   I K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR
Sbjct:  576 SFSREDVSRQVQAQQLALAIRDEVLDLERAGIKIVQIDEAAFREGLPLRKAQWQQYLDWAVAAFRLCASGVRDETQIHTHMCYSEFNDVIKSIAAMDADVITIETSRSDMELLDAF-EAFDYPNDIGPGVYDIHSPRVPETAEMVSLIAKAARRIPAERLWVNPDCGLKTRGWPETEAALINMVAAARQLR 765          
The following BLAST results are available for this feature:
BLAST of CF832573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
METE_BORPE1.561e-5961.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPA1.561e-5961.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORBR1.561e-5961.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPD2.663e-5960.215-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITEU3.478e-5958.765-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEU54.542e-5961.265-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NITOC5.932e-5959.905-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRVO7.747e-5959.905-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALSO1.012e-5859.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSESM1.012e-5861.785-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832573 ID=CF832573; Name=CF832573; organism=Citrus sinensis; type=EST; length=788bp
TTTTTTTTTTTTTTTAGAAAATAGAAGCCAATTGCTCAATAGTGCATAAT
ATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTATTCGAATAG
GTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAAAAAAAAAA
TCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTCACTTGGCA
CTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATGTTTGAGAG
GGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACAGTCAGGGT
TAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGTTGATTCTG
TCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATGTCATACAC
ACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCACGGAAGACAGACA
GGAGCTTCTCATCAGAACGAGAGTTCTCAATGGTGATCACATCAGCATCC
ATGTCGATAATTGAGTGGATAATGTCGTTGAAGTTGGAGTAGCACATGTG
GGTGTGGATCTGGGTAGTGTCCTGGACGCCACAGTTGGTGATTCTGAAGG
AGTGGACTGCCCAGTCCAAGTAGAAAGCATGCTCAGATTTCCTAAGAGGC
AATCCTTCCCTCAAGGCAGCCTCATCAATTTGAATAACGTTAATGCCTGC
CTTCTCAAGATCCTCGACTTCGTCCTTGATGGCCAAAGCAATCTGGTAGC
AGGTTTCATGTCTGGGCTGGTCATTTCTAACAAAGGAC
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