CF832573

Overview
NameCF832573
Unique NameCF832573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:241..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_HAEIE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Haemophilus influenzae (strain PittEE) GN=metE PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.254e-58
Identity = 115/195 (58.97%), Postives = 139/195 (71.28%), Query Frame = -2 
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            SFVRND PR   C QI +A+ DEV DLE AGI VIQIDE A+REGLPL++++   YL WA  +FR+++ GVQD TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  E+   + K L V+    LWVNPDCGLKTR +TE    L  MV   K LR +LA
Sbjct:  563 SFVRNDIPRSTVCKQIGVALSDEVLDLEAAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSSMGVQDDTQIHTHMCYSEFNDILPAIAALDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTAAEVEHLLRKALNVIPKERLWVNPDCGLKTRGWTETIDQLKVMVDVTKKLRAELA 756
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PSEAE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa GN=metE PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.944e-58
Identity = 118/195 (60.51%), Postives = 136/195 (69.74%), Query Frame = -2 
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            SF R D  R     Q+ALAI+DEV DLE AGI ++QIDEAA REGLPLR++    YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F E   Y   IGPGVYDIHSPR+PS EEI   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR  LA
Sbjct:  571 SFPREDVSREVQARQLALAIRDEVVDLEAAGIRIVQIDEAAFREGLPLRRNAWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EQFDYPNEIGPGVYDIHSPRVPSREEIVALLRKAARRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELRGDLA 764
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PSEAB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=metE PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.944e-58
Identity = 118/195 (60.51%), Postives = 136/195 (69.74%), Query Frame = -2 
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            SF R D  R     Q+ALAI+DEV DLE AGI ++QIDEAA REGLPLR++    YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F E   Y   IGPGVYDIHSPR+PS EEI   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR  LA
Sbjct:  571 SFPREDVSREVQARQLALAIRDEVVDLEAAGIRIVQIDEAAFREGLPLRRNAWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EQFDYPNEIGPGVYDIHSPRVPSREEIVALLRKAARRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELRGDLA 764
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PSEA8 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=metE PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.944e-58
Identity = 118/195 (60.51%), Postives = 136/195 (69.74%), Query Frame = -2 
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            SF R D  R     Q+ALAI+DEV DLE AGI ++QIDEAA REGLPLR++    YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F E   Y   IGPGVYDIHSPR+PS EEI   + K    +    LWVNPDCGLKTR + E + AL NMVAAA+ LR  LA
Sbjct:  571 SFPREDVSREVQARQLALAIRDEVVDLEAAGIRIVQIDEAAFREGLPLRRNAWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EQFDYPNEIGPGVYDIHSPRVPSREEIVALLRKAARRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELRGDLA 764
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_NEIM0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup C (strain 053442) GN=metE PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.944e-58
Identity = 114/195 (58.46%), Postives = 141/195 (72.31%), Query Frame = -2 
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            SFVRND PR   C QIALA+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL+WA  SFR+++ G +D+TQIHTHMCYS FNDI+ +I  MDADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  E+   + K + V+    LWVNPDCGLKTR + E    L  M+   + LR +LA
Sbjct:  564 SFVRNDIPRATVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGK-FKYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLEQLQVMMNVTRKLRAELA 757
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_PSEA7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=metE PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.022e-58
Identity = 112/191 (58.64%), Postives = 138/191 (72.25%), Query Frame = -2 
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SF R D  R     Q+ALA++DEV DLE+AGI ++QIDEAA REGLPLR+++   YL+WA  +FR+   GV+D TQIHTHMCYS FND+I SI  MDADVITIE SRSD +LL  F E   Y   IGPGVYDIHSPR+P+ E++   ++K    +    LWVNPDCGLKTR + E + AL+NMVAAA+ LR
Sbjct:  569 SFPREDVSREVQARQLALALRDEVSDLEQAGIRIVQIDEAAFREGLPLRRADWPHYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAF-EAFAYPNEIGPGVYDIHSPRVPAVEDMVKLLSKAAERIPAARLWVNPDCGLKTRAWAETEAALANMVAAARQLR 758
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_METCA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Methylococcus capsulatus GN=metE PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 5.022e-58
Identity = 113/191 (59.16%), Postives = 137/191 (71.73%), Query Frame = -2 
Query:  215 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLR 787
            SF R+DQPR  T  QIALAI+DEV DLE AG+  IQIDE A REGLPL+ ++ A YLDWAV +FR+ +CGV D TQIHTHMCYS F DI+ +I ++DADVITIE  RS   LL  F     Y   IGPGVYDIHSPR+P+  EI   + K  A ++   LWVNPDCGLKTR++ E + AL+NMV AA+ +R
Sbjct:  563 SFARDDQPRAVTALQIALAIRDEVADLEAAGVAAIQIDEPAFREGLPLKAADRADYLDWAVKAFRLASCGVADDTQIHTHMCYSEFGDILPAIAELDADVITIETCRSAMDLLEAF-GAFGYPNDIGPGVYDIHSPRVPAGAEIRALLEKAAAAVDPERLWVNPDCGLKTRQWPEAEQALANMVEAARAMR 752
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_ACTPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=metE PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.559e-58
Identity = 115/195 (58.97%), Postives = 138/195 (70.77%), Query Frame = -2 
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            SFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR++  GV+D TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  EI   + K L V+    LWVNPDCGLKTR + E    L  MV   K LR +LA
Sbjct:  563 SFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSYMGVKDDTQIHTHMCYSEFNDILPAIAGLDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTAGEIEHLLRKALKVIPKERLWVNPDCGLKTRGWKETIEQLQVMVEVTKKLRAELA 756
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_ACTP7 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=metE PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.559e-58
Identity = 115/195 (58.97%), Postives = 138/195 (70.77%), Query Frame = -2 
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            SFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR++  GV+D TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  EI   + K L V+    LWVNPDCGLKTR + E    L  MV   K LR +LA
Sbjct:  563 SFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSYMGVKDDTQIHTHMCYSEFNDILPAIAGLDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTAGEIEHLLRKALKVIPKERLWVNPDCGLKTRGWKETIEQLQVMVEVTKKLRAELA 756
[Close]
BLAST of CF832573 vs. ExPASy Swiss-Prot
Match: METE_ACTP2 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metE PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.559e-58
Identity = 115/195 (58.97%), Postives = 138/195 (70.77%), Query Frame = -2 
Query:  203 SFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAKLLRTQLA 787
            SFVRND PR   C QI +A+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL WA  +FR++  GV+D TQIHTHMCYS FNDI+ +I  +DADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  EI   + K L V+    LWVNPDCGLKTR + E    L  MV   K LR +LA
Sbjct:  563 SFVRNDIPRSTVCKQIGVALSDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLQWAGEAFRLSYMGVKDDTQIHTHMCYSEFNDILPAIAGLDADVITIETSRSDMELLTAFAD-FKYPNDIGPGVYDIHSPRVPTAGEIEHLLRKALKVIPKERLWVNPDCGLKTRGWKETIEQLQVMVEVTKKLRAELA 756
The following BLAST results are available for this feature:
BLAST of CF832573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
METE_HAEIE2.254e-5858.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEAE2.944e-5860.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEAB2.944e-5860.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA82.944e-5860.515-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIM02.944e-5858.465-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PSEA75.022e-5858.645-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_METCA5.022e-5859.165-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTPJ6.559e-5858.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP76.559e-5858.975-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ACTP26.559e-5858.975-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832573 ID=CF832573; Name=CF832573; organism=Citrus sinensis; type=EST; length=788bp
TTTTTTTTTTTTTTTAGAAAATAGAAGCCAATTGCTCAATAGTGCATAAT
ATGCATACGGAAAATTTTCATCACATCACGACCCACAGTTATTCGAATAG
GTAATAAGACAGGAATTTTCTTTCTTTGTTTAAAGTGAAAAAAAAAAAAA
TCAATGGCTCAGGAAGTATCCCTCCAATCTCCAGAACCACTCACTTGGCA
CTGGCAAGCTGGGTGCGGAGTAGCTTGGCAGCAGCGACCATGTTTGAGAG
GGCTGGCTTCACCTCAGTGTACTTGCGAGTCTTAAGACCACAGTCAGGGT
TAACCCACAAAATGTTGGTTTCTAGCACAGCAAGCATCTTGTTGATTCTG
TCAGCAATTTCTTCAGTTGATGGTATTCTTGGAGAGTGGATGTCATACAC
ACCAGGGCCAATTCCAGCACCATACTTGACTCCCTCACGGAAGACAGACA
GGAGCTTCTCATCAGAACGAGAGTTCTCAATGGTGATCACATCAGCATCC
ATGTCGATAATTGAGTGGATAATGTCGTTGAAGTTGGAGTAGCACATGTG
GGTGTGGATCTGGGTAGTGTCCTGGACGCCACAGTTGGTGATTCTGAAGG
AGTGGACTGCCCAGTCCAAGTAGAAAGCATGCTCAGATTTCCTAAGAGGC
AATCCTTCCCTCAAGGCAGCCTCATCAATTTGAATAACGTTAATGCCTGC
CTTCTCAAGATCCTCGACTTCGTCCTTGATGGCCAAAGCAATCTGGTAGC
AGGTTTCATGTCTGGGCTGGTCATTTCTAACAAAGGAC
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