CF832574

Overview
NameCF832574
Unique NameCF832574
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:92..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_BRAJA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bradyrhizobium japonicum GN=metE PE=3 SV=2)

HSP 1 Score: 311.612 bits (797), Expect = 2.646e-84
Identity = 156/238 (65.55%), Postives = 185/238 (77.73%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CV+PPI++GDV RPK +TV W   AQS+T++PMK MLTGPVTILNWSFVR+D PR E C Q+ALA++DEV DLE AG  +IQIDEAALREGLPLR+S+   YLDWA   FRI + GV D TQIHTHMCYS FNDII +I  MDADVI+IE SRS  +LL  FR   +Y   IGPGVYDIHSPR+P T+E+ + I      L+ + LWVNPDCGLKTRK+ EV+PAL+NMVAAA+
Sbjct:  534 YGSRCVRPPILFGDVVRPKPITVEWWRYAQSLTSKPMKAMLTGPVTILNWSFVRDDIPRSEVCRQLALAMRDEVRDLENAGAAMIQIDEAALREGLPLRRSDWKAYLDWAGDCFRICSSGVTDQTQIHTHMCYSEFNDIIGAIAAMDADVISIETSRSKMELLDAFRR-YEYPNQIGPGVYDIHSPRVPETDEMKELIVLARTRLQDSQLWVNPDCGLKTRKWEEVRPALANMVAAAR 770          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_ALCBS (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=metE PE=3 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 5.895e-84
Identity = 156/238 (65.55%), Postives = 179/238 (75.21%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CVKPPII+GDV RP+AMTV W+  AQS+T +P+KGMLTGPVTIL WSFVR+DQPR +TC QIALA++DEV+DLEKAGI VIQIDE ALREGLPLR+ E   YLDWAV  FR+    V D TQIHTHMCYS FNDII +I  +DADVITIE SRS+ +LL  FR+   Y   IGPGVYDIHSP  P    +   + K    L    LWVNPDCGLKTRK+ E + AL+NMV AAK
Sbjct:  521 YGSRCVKPPIIFGDVQRPQAMTVEWARYAQSLTHKPVKGMLTGPVTILQWSFVRDDQPRADTCRQIALALRDEVQDLEKAGIKVIQIDEPALREGLPLRQEEWTQYLDWAVDCFRLATVSVDDDTQIHTHMCYSEFNDIIEAIAALDADVITIETSRSNMELLDAFRD-FHYPNDIGPGVYDIHSPNEPDVAWMVQLMEKAAERLPKERLWVNPDCGLKTRKWDETRAALANMVNAAK 757          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_CHRSD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=metE PE=3 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 1.313e-83
Identity = 154/238 (64.71%), Postives = 180/238 (75.63%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CVKPP+I+GDVSRP  MTV WS  AQS+T +PMKGMLTGPVTIL WSFVR+DQPR  TC QIAL+++DEV DLE AGI +IQIDE ALREGLPLR+ E   YLDWAV SF+++    +D TQIHTHMCYS FNDII +I  +DADVITIE SRSD +LL  F++   Y   IGPGVYDIHSP IP  E +   + K    +    LWVNPDCGLKTR + EV+PAL+NMV AA+
Sbjct:  518 YGSRCVKPPVIFGDVSRPGPMTVRWSEYAQSLTDKPMKGMLTGPVTILQWSFVRDDQPRDATCRQIALSLRDEVADLEAAGIKIIQIDEPALREGLPLRQGEWQEYLDWAVKSFKLSAAVARDETQIHTHMCYSEFNDIIAAIAALDADVITIETSRSDMELLDAFQD-FAYPNEIGPGVYDIHSPNIPEVEWMVSLMEKAAEKIPAERLWVNPDCGLKTRGWAEVEPALANMVEAAR 754          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_BORA1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella avium (strain 197N) GN=metE PE=3 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 2.925e-83
Identity = 154/238 (64.71%), Postives = 180/238 (75.63%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CVKPPII+GDV+RP  MTV WSS AQS+T +P+KGMLTGPVTIL WSFVR+DQPR  TC Q+ALA++DEV DLEKAG+ VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV D TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + +   + K  A L    LWVNPDCGLKTR + E + AL +MV AA+
Sbjct:  523 YGSRCVKPPIIFGDVARPAPMTVGWSSYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVLDLEKAGVKVIQIDEPAIREGLPLRRADWQAYLDWAVDCFRLSTAGVADDTQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPDVDWMVGLMQKAGANLSKERLWVNPDCGLKTRAWPETEAALISMVQAAR 759          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_MESSB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesorhizobium sp. (strain BNC1) GN=metE PE=3 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 3.821e-83
Identity = 151/238 (63.45%), Postives = 184/238 (77.31%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CV+PPII+GDVSRP+ MTV W++ AQS+T +P+KGMLTGPVT+L WSFVR+D PR   C QIA A++DEV DLE AGI VIQIDE ALREGLPLR++E   YLDWAV  FR+ + GV+  TQIHTHMCY+ FNDII +I  MDADVI+IE SRS  +LL  FR   +Y   IGPGV+DIHSPR+P  +E+AD + K    L+   +WVNPDCGLKTRK+ EV+ AL+NMV AA+
Sbjct:  528 YGSRCVRPPIIFGDVSRPQPMTVDWATYAQSLTDKPVKGMLTGPVTMLQWSFVRDDLPRETVCRQIAFALRDEVSDLEAAGIGVIQIDEPALREGLPLREAERPAYLDWAVECFRLASSGVKPETQIHTHMCYAEFNDIIDAIAAMDADVISIETSRSKMELLRAFR-AFRYPNDIGPGVFDIHSPRVPPADEMADLLRKAEDGLDPRQIWVNPDCGLKTRKWEEVRFALANMVEAAR 764          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_NEIMF (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=metE PE=3 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 6.517e-83
Identity = 152/234 (64.96%), Postives = 180/234 (76.92%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMV 702
            YGS CVKPPII+GDVSRP+AMTV WS+ AQS+T RPMKGMLTGPVTIL WSFVRND PR   C QIALA+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL+WA  SFR+++ G +D+TQIHTHMCYS FNDI+ +I  MDADVITIE SRSD +LL+ F E  KY   IGPGVYDIHSPR+P+  E+   + K + V+    LWVNPDCGLKTR + E    L  M+
Sbjct:  514 YGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGE-FKYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLEQLQVMM 746          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_NEIMA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup A GN=metE PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 8.512e-83
Identity = 152/234 (64.96%), Postives = 180/234 (76.92%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMV 702
            YGS CVKPPII+GDVSRP+AMTV WS+ AQS+T RPMKGMLTGPVTIL WSFVRND PR   C QIALA+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL+WA  SFR+++ G +D+TQIHTHMCYS FNDI+ +I  MDADVITIE SRSD +LL+ F E  KY   IGPGVYDIHSPR+P+  E+   + K + V+    LWVNPDCGLKTR + E    L  M+
Sbjct:  514 YGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSTGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGE-FKYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLEQLQVMM 746          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_BORPD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=metE PE=3 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.452e-82
Identity = 151/238 (63.45%), Postives = 180/238 (75.63%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CVKPPII+GDV+RP  MTV WSS AQS+T +P+KGMLTGPVTIL WSFVR+DQPR +TC Q+ALA++DEV DLE+AG+ VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV   TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E  +Y   IGPGVYDIHSP +P  + +   + K    L +  LWVNPDCGLKTR + E + AL  MV AA+
Sbjct:  523 YGSRCVKPPIIFGDVARPAPMTVGWSSYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREQTCRQLALALRDEVVDLEQAGVRVIQIDEPAIREGLPLRRADWQAYLDWAVDCFRLSTAGVAADTQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFRYPNDIGPGVYDIHSPNVPDVDWMVGLMRKAAGRLPSERLWVNPDCGLKTRAWPETEAALVGMVEAAR 759          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_NEIMB (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup B GN=metE PE=1 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.896e-82
Identity = 151/234 (64.53%), Postives = 180/234 (76.92%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMV 702
            YGS CVKPPII+GDVSRP+AMTV WS+ AQS+T RPMKGMLTGPVTIL WSFVRND PR   C QIALA+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL+WA  SFR+++ G +D+TQIHTHMCYS FNDI+ +I  MDADVITIE SRSD +LL+ F E  +Y   IGPGVYDIHSPR+P+  E+   + K + V+    LWVNPDCGLKTR + E    L  M+
Sbjct:  514 YGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGE-FQYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLEQLQVMM 746          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_NEIG1 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=metE PE=3 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.896e-82
Identity = 151/234 (64.53%), Postives = 180/234 (76.92%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMV 702
            YGS CVKPPII+GDVSRP+AMTV WS+ AQ++T RPMKGMLTGPVTIL WSFVRND PR   C QIALA+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL+WA  SFR+++ G +D+TQIHTHMCYS FNDI+ +I  MDADVITIE SRSD +LL+ F E  KY   IGPGVYDIHSPR+P+  E+   + K + V+    LWVNPDCGLKTR + E    L  M+
Sbjct:  514 YGSRCVKPPIIFGDVSRPEAMTVAWSTYAQNLTKRPMKGMLTGPVTILQWSFVRNDIPRATVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLAAFGE-FKYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLEQLQVMM 746          
The following BLAST results are available for this feature:
BLAST of CF832574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 286
Match NameE-valueIdentityDescription
METE_BRAJA2.646e-8465.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ALCBS5.895e-8465.555-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRSD1.313e-8364.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORA12.925e-8364.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_MESSB3.821e-8363.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMF6.517e-8364.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMA8.512e-8364.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPD1.452e-8263.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIMB1.896e-8264.535-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIG11.896e-8264.535-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832574 ID=CF832574; Name=CF832574; organism=Citrus sinensis; type=EST; length=716bp
TATGGATCTCCCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCG
TCCCAAGGCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAG
CTCGCCCAATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGG
TCCTTTGTTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGC
TTTGGCCATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACG
TTATTCAAATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAA
TCTGAGCATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCAC
CAACTGTGGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACT
CCAACTTCAACGACATTATCCACTCAATTATCGACATGGATGCTGATGTG
ATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCG
TGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTGTGTATGACATCC
ACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGACAGAATCAACAAG
ATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAACCCTGACTGTGG
TCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCCTCTCAAACATGG
TCGCTGCTGCCAAGCT
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