CF832574

Overview
NameCF832574
Unique NameCF832574
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9752 contig Csv1_Contig9752:92..807. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_BORPE (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella pertussis GN=metE PE=3 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.896e-82
Identity = 152/238 (63.87%), Postives = 179/238 (75.21%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CVKPPII+GDV+RP  MTV WS+ AQS+T +P+KGMLTGPVTIL WSFVR+DQPR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + + + + K  A L    LWVNPDCGLKTR + E + AL  MV AA+
Sbjct:  523 YGSRCVKPPIIFGDVARPAPMTVGWSAYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPEVDWMVELMRKAAARLPKERLWVNPDCGLKTRAWPETEAALIGMVQAAR 759          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_BORPA (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella parapertussis GN=metE PE=3 SV=2)

HSP 1 Score: 305.449 bits (781), Expect = 1.896e-82
Identity = 152/238 (63.87%), Postives = 179/238 (75.21%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CVKPPII+GDV+RP  MTV WS+ AQS+T +P+KGMLTGPVTIL WSFVR+DQPR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + + + + K  A L    LWVNPDCGLKTR + E + AL  MV AA+
Sbjct:  523 YGSRCVKPPIIFGDVARPAPMTVGWSAYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPEVDWMVELMRKAAARLPKERLWVNPDCGLKTRAWPETEAALIGMVQAAR 759          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_BORBR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Bordetella bronchiseptica GN=metE PE=3 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.896e-82
Identity = 152/238 (63.87%), Postives = 179/238 (75.21%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CVKPPII+GDV+RP  MTV WS+ AQS+T +P+KGMLTGPVTIL WSFVR+DQPR  TC Q+ALA++DEV DLE AGI VIQIDE A+REGLPLR+++   YLDWAV  FR++  GV + TQIHTHMCYS FNDII SI  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSP +P  + + + + K  A L    LWVNPDCGLKTR + E + AL  MV AA+
Sbjct:  523 YGSRCVKPPIIFGDVARPAPMTVGWSAYAQSLTDKPVKGMLTGPVTILQWSFVRDDQPREATCRQLALALRDEVVDLEAAGIRVIQIDEPAIREGLPLRRADWRAYLDWAVDCFRLSTAGVGEATQIHTHMCYSEFNDIIESIAAMDADVITIETSRSNMELLKAF-EDFHYPNDIGPGVYDIHSPNVPEVDWMVELMRKAAARLPKERLWVNPDCGLKTRAWPETEAALIGMVQAAR 759          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_NEIM0 (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Neisseria meningitidis serogroup C (strain 053442) GN=metE PE=3 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.477e-82
Identity = 151/234 (64.53%), Postives = 180/234 (76.92%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMV 702
            YGS CVKPPII+GDVSRP+AMTV WS+ AQS+T RPMKGMLTGPVTIL WSFVRND PR   C QIALA+ DEV DLEKAGI VIQIDE A+REGLPL++++   YL+WA  SFR+++ G +D+TQIHTHMCYS FNDI+ +I  MDADVITIE SRSD +LL+ F +  KY   IGPGVYDIHSPR+P+  E+   + K + V+    LWVNPDCGLKTR + E    L  M+
Sbjct:  514 YGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRATVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGK-FKYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLEQLQVMM 746          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_PELCD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=metE PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.224e-82
Identity = 154/238 (64.71%), Postives = 179/238 (75.21%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CVKPPIIYGDV R K MT+ W++ AQ  T RP+KGMLTGPVT+L WSFVR+DQPR  TC QIALAI+DEV+DLE+AGI +IQ+DEAALREGLPLRKS    YL WAV +FR+T  GV D+TQIHTHMCYS FN I   I  MDADVI+IE SRS+ +LL V  E   Y   IGPGVYDIHSPR+PS  E+ + + K   V+    LWVNPDCGLKTR + E   +L NMVAAA+
Sbjct:  514 YGSRCVKPPIIYGDVERLKPMTMEWTTYAQQQTNRPLKGMLTGPVTMLCWSFVRDDQPRSATCKQIALAIRDEVQDLEQAGIKIIQVDEAALREGLPLRKSAWREYLGWAVDAFRLTASGVADSTQIHTHMCYSEFNHIAEWIAKMDADVISIEASRSNMELLGVL-ESFTYPNDIGPGVYDIHSPRVPSVAEMVELLRKASEVIPLERLWVNPDCGLKTRAWPETLASLRNMVAAAQ 750          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_RALSO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia solanacearum GN=metE PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 7.206e-82
Identity = 151/238 (63.45%), Postives = 178/238 (74.79%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CVKPP+IYGDV RP+ MTV WS  AQS+TA+PMKGMLTGPVT+L WSFVR+DQPR +T  QIALA++DEV DLE AGI  IQIDE A REGLPLR  + A YL+WA   FR++  GV++ TQIHTHMCYS FNDI+ +I  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSPR+P  EE+   ++K   V+    LWVNPDCGLKTR + EV+ AL  MV A +
Sbjct:  513 YGSRCVKPPVIYGDVYRPEPMTVEWSRYAQSLTAKPMKGMLTGPVTMLQWSFVRDDQPREQTALQIALALRDEVRDLEAAGIAAIQIDEPAFREGLPLRAGDVAVYLEWAARVFRVSASGVRNDTQIHTHMCYSEFNDILPAIASMDADVITIETSRSNMELLDAFGE-FAYPNEIGPGVYDIHSPRVPRVEEMEALLDKAAQVVPVQRLWVNPDCGLKTRGWPEVEAALRGMVEATR 749          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_SALRD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Salinibacter ruber (strain DSM 13855) GN=metE PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.411e-82
Identity = 151/238 (63.45%), Postives = 178/238 (74.79%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YG+ CV+PPII GDVSRP+ MT  W S A   T  P+KGMLTGPVT+L WSFVR+DQ R ETC QIALAI+DEV DLE  GI  IQIDE A REGLPLR+ +   YLDWAV  FR+ + GV+D TQIHTHMCYS FNDII +I DMDADVI++E SRS  +LL  F +   Y   IGPGVYDIHSPR+PS EE+ + I   L  LE + +WVNPDCGLKTR++ EV+P+L NMV AA+
Sbjct:  525 YGTRCVRPPIIAGDVSRPEPMTTRWLSYANDQTDTPVKGMLTGPVTMLQWSFVRDDQSRAETCRQIALAIRDEVLDLEDVGIQAIQIDEPAFREGLPLREHQWDDYLDWAVECFRLASSGVRDETQIHTHMCYSEFNDIIEAIADMDADVISVEASRSKMELLDSF-DAFDYPNEIGPGVYDIHSPRVPSVEEMEELIRTALDALEPSQMWVNPDCGLKTRRWVEVQPSLENMVQAAE 761          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_CHRVO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Chromobacterium violaceum GN=metE PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.097e-81
Identity = 151/238 (63.45%), Postives = 180/238 (75.63%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CVKPPII+GDV+RPK MTV W+  AQS+TA+P+KGMLTGPVTIL WSFVR+D PR E C QIALA+ DEV DLE AGI VIQIDE A+REGLPL+++    YL WA  +FR+++ GV D TQIHTHMCYS F DI+ +I  +DADVITIE SRSD  LL+ F    +Y   IGPGVYDIHSPR+PS  EI   ++K L V+    LWVNPDCGLKTR + EV+ AL+ MVA  +
Sbjct:  514 YGSRCVKPPIIFGDVARPKPMTVDWARYAQSLTAKPVKGMLTGPVTILQWSFVRDDLPRREVCRQIALALNDEVLDLEAAGIRVIQIDEPAIREGLPLKRAGRDVYLAWAGEAFRLSSRGVDDATQIHTHMCYSEFGDILPAIAALDADVITIETSRSDMALLADFGR-FRYPNAIGPGVYDIHSPRVPSAAEIRALLDKALRVIPAERLWVNPDCGLKTRGWPEVEAALAAMVAVGR 750          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_RALPJ (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Ralstonia pickettii (strain 12J) GN=metE PE=3 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.738e-81
Identity = 149/236 (63.14%), Postives = 179/236 (75.85%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAA 708
            YGS CVKPP+IYGDV RP+AMTV WS  AQS+T++PMKGMLTGPVT+L WSFVR+DQPR +T  QIALA++DEV DLE AGI  IQIDE A REGLPLR S+   YL+WA  +FR++  GV++ TQIHTHMCYS FNDI+ +I  MDADVITIE SRS+ +LL  F E   Y   IGPGVYDIHSPR+P  +E+   ++K   V+    LWVNPDCGLKTR + EV+ AL  +V A
Sbjct:  516 YGSRCVKPPVIYGDVYRPEAMTVEWSKYAQSLTSKPMKGMLTGPVTMLQWSFVRDDQPREQTALQIALALRDEVCDLEAAGIAAIQIDEPAFREGLPLRASDVPTYLEWAARAFRVSASGVRNDTQIHTHMCYSEFNDILPAIASMDADVITIETSRSNMELLDAFAE-FAYPNEIGPGVYDIHSPRVPRVDEMESLLDKAAQVVPVQRLWVNPDCGLKTRGWPEVEAALQGIVEA 750          
BLAST of CF832574 vs. ExPASy Swiss-Prot
Match: METE_CAUCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Caulobacter crescentus GN=metE PE=3 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.576e-81
Identity = 153/238 (64.29%), Postives = 175/238 (73.53%), Query Frame = 1
Query:    1 YGSPCVKPPIIYGDVSRPKAMTVFWSSLAQSMTARPMKGMLTGPVTILNWSFVRNDQPRHETCYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLETNILWVNPDCGLKTRKYTEVKPALSNMVAAAK 714
            YGS CV+PPI++GDVSRP  MTV W   AQ +T RPMKGMLTGPVTILNWSFVR+D PR   C QIALAI+DEV DLE  G  +IQIDEAALREGLPLR+ +   YLDWAV SFR+   GV D TQIHTHMCYS FNDII +I  MDADVI+IE +RS  +LL  F  G  Y A IGPGVYDIHSPR+P+ EE+   +      L    LWVNPDCGLKTRK+ E + A+ NMV AA+
Sbjct:  536 YGSRCVRPPILFGDVSRPAPMTVDWWRYAQGLTRRPMKGMLTGPVTILNWSFVRDDLPRETACRQIALAIRDEVVDLEATGAAIIQIDEAALREGLPLRRGDWDAYLDWAVESFRLAASGVADATQIHTHMCYSEFNDIIAAIGAMDADVISIETARSKMELLDAF-VGYAYPAQIGPGVYDIHSPRVPAVEEMTTLLAAARQRLAGEQLWVNPDCGLKTRKWPETQAAIVNMVEAAR 772          
The following BLAST results are available for this feature:
BLAST of CF832574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 286
Match NameE-valueIdentityDescription
METE_BORPE1.896e-8263.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORPA1.896e-8263.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_BORBR1.896e-8263.875-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_NEIM02.477e-8264.535-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_PELCD4.224e-8264.715-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALSO7.206e-8263.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SALRD9.411e-8263.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CHRVO2.097e-8163.455-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_RALPJ2.738e-8163.145-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CAUCR3.576e-8164.295-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832574 ID=CF832574; Name=CF832574; organism=Citrus sinensis; type=EST; length=716bp
TATGGATCTCCCTGTGTGAAGCCACCCATCATCTATGGTGATGTGAGCCG
TCCCAAGGCTATGACCGTCTTCTGGTCCTCCTTGGCTCAGAGCATGACAG
CTCGCCCAATGAAAGGAATGCTTACTGGCCCTGTCACCATTCTCAACTGG
TCCTTTGTTAGAAATGACCAGCCCAGACATGAAACCTGCTACCAGATTGC
TTTGGCCATCAAGGACGAAGTCGAGGATCTTGAGAAGGCAGGCATTAACG
TTATTCAAATTGATGAGGCTGCCTTGAGGGAAGGATTGCCTCTTAGGAAA
TCTGAGCATGCTTTCTACTTGGACTGGGCAGTCCACTCCTTCAGAATCAC
CAACTGTGGCGTCCAGGACACTACCCAGATCCACACCCACATGTGCTACT
CCAACTTCAACGACATTATCCACTCAATTATCGACATGGATGCTGATGTG
ATCACCATTGAGAACTCTCGTTCTGATGAGAAGCTCCTGTCTGTCTTCCG
TGAGGGAGTCAAGTATGGTGCTGGAATTGGCCCTGGTGTGTATGACATCC
ACTCTCCAAGAATACCATCAACTGAAGAAATTGCTGACAGAATCAACAAG
ATGCTTGCTGTGCTAGAAACCAACATTTTGTGGGTTAACCCTGACTGTGG
TCTTAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCCTCTCAAACATGG
TCGCTGCTGCCAAGCT
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